Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20b17
(314 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021380-1|AAX33528.1| 307|Drosophila melanogaster LD42070p pro... 40 7e-04
AE013599-3140|AAF46681.2| 307|Drosophila melanogaster CG9415-PA... 40 7e-04
AE013599-3139|AAM70855.2| 488|Drosophila melanogaster CG9415-PB... 40 7e-04
AY121660-1|AAM51987.1| 670|Drosophila melanogaster RE06985p pro... 29 0.95
AL031765-5|CAA21123.1| 670|Drosophila melanogaster EG:22E5.11 p... 29 0.95
AE014298-314|AAF45709.2| 670|Drosophila melanogaster CG4322-PA ... 29 0.95
BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p pro... 26 8.8
AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p pro... 26 8.8
AE014296-2480|AAF49661.2| 922|Drosophila melanogaster CG13457-P... 26 8.8
AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-P... 26 8.8
AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P... 26 8.8
>BT021380-1|AAX33528.1| 307|Drosophila melanogaster LD42070p
protein.
Length = 307
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 244 ASPSPSRKRRLDHLTWEEKMQKK 312
AS ++KRRLDHLTWEEK+Q+K
Sbjct: 65 ASQPKAKKRRLDHLTWEEKVQRK 87
>AE013599-3140|AAF46681.2| 307|Drosophila melanogaster CG9415-PA,
isoform A protein.
Length = 307
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 244 ASPSPSRKRRLDHLTWEEKMQKK 312
AS ++KRRLDHLTWEEK+Q+K
Sbjct: 65 ASQPKAKKRRLDHLTWEEKVQRK 87
>AE013599-3139|AAM70855.2| 488|Drosophila melanogaster CG9415-PB,
isoform B protein.
Length = 488
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 244 ASPSPSRKRRLDHLTWEEKMQKK 312
AS ++KRRLDHLTWEEK+Q+K
Sbjct: 65 ASQPKAKKRRLDHLTWEEKVQRK 87
>AY121660-1|AAM51987.1| 670|Drosophila melanogaster RE06985p
protein.
Length = 670
Score = 29.5 bits (63), Expect = 0.95
Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 3/19 (15%)
Frame = +3
Query: 201 LLGEGGRFGYDSR---CSV 248
LLGE GRFGYDSR CS+
Sbjct: 172 LLGEWGRFGYDSRLQTCSI 190
>AL031765-5|CAA21123.1| 670|Drosophila melanogaster EG:22E5.11
protein.
Length = 670
Score = 29.5 bits (63), Expect = 0.95
Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 3/19 (15%)
Frame = +3
Query: 201 LLGEGGRFGYDSR---CSV 248
LLGE GRFGYDSR CS+
Sbjct: 172 LLGEWGRFGYDSRLQTCSI 190
>AE014298-314|AAF45709.2| 670|Drosophila melanogaster CG4322-PA
protein.
Length = 670
Score = 29.5 bits (63), Expect = 0.95
Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 3/19 (15%)
Frame = +3
Query: 201 LLGEGGRFGYDSR---CSV 248
LLGE GRFGYDSR CS+
Sbjct: 172 LLGEWGRFGYDSRLQTCSI 190
>BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p
protein.
Length = 1023
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 208 VKEEDSDMILDVASPSPSRKRRLDHLTWEEKMQKK 312
V EE +LD SP R + H+T+++ + ++
Sbjct: 700 VHEEGHPGLLDCGQDSPRTPREIQHITYKQSVSQQ 734
>AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p
protein.
Length = 922
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 208 VKEEDSDMILDVASPSPSRKRRLDHLTWEEKMQKK 312
V EE +LD SP R + H+T+++ + ++
Sbjct: 599 VHEEGHPGLLDCGQDSPRTPREIQHITYKQSVSQQ 633
>AE014296-2480|AAF49661.2| 922|Drosophila melanogaster CG13457-PA,
isoform A protein.
Length = 922
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 208 VKEEDSDMILDVASPSPSRKRRLDHLTWEEKMQKK 312
V EE +LD SP R + H+T+++ + ++
Sbjct: 599 VHEEGHPGLLDCGQDSPRTPREIQHITYKQSVSQQ 633
>AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-PB,
isoform B protein.
Length = 1023
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 208 VKEEDSDMILDVASPSPSRKRRLDHLTWEEKMQKK 312
V EE +LD SP R + H+T+++ + ++
Sbjct: 700 VHEEGHPGLLDCGQDSPRTPREIQHITYKQSVSQQ 734
>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
protein.
Length = 1271
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 175 PIIITVPNNYLVKEEDSDMILDVASPSPSRKRR 273
P I+T YLV D++ +L V + P+RKRR
Sbjct: 462 PHIVTKGYEYLVNFSDTEQLL-VNAERPTRKRR 493
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,099,576
Number of Sequences: 53049
Number of extensions: 223071
Number of successful extensions: 526
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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