Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20b13
(527 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 45 8e-06
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 41 1e-04
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 38 0.001
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 37 0.002
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 36 0.004
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 36 0.005
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 35 0.009
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 34 0.015
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 33 0.026
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 33 0.035
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 32 0.046
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 32 0.046
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 31 0.080
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 31 0.11
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 31 0.14
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 30 0.19
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 29 0.32
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 29 0.57
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 0.75
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 0.75
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 28 0.75
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 0.99
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 1.3
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 27 1.3
SPBC1539.03c |||argininosuccinate lyase|Schizosaccharomyces pomb... 27 1.7
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 2.3
SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|... 27 2.3
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 27 2.3
SPAC222.08c |||imidazoleglycerol-phosphate synthase |Schizosacch... 26 3.0
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 3.0
SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces ... 26 4.0
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 26 4.0
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 4.0
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 26 4.0
SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces... 26 4.0
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 25 5.3
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 5.3
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 25 5.3
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 25 7.0
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 25 7.0
SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.2
SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|... 25 9.2
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 25 9.2
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 44.8 bits (101), Expect = 8e-06
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +3
Query: 288 AFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 440
++ +L Y +Q K + +L V G + G+LTA+MG SGAGK+TLLN+L
Sbjct: 883 SWRNLNYDIQI--KGEHRRLLNGVQGFVVPGKLTALMGESGAGKTTLLNVL 931
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 339 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILT 443
K IL +GEL ++G G+G ST L +T
Sbjct: 174 KAILSHCHALANAGELVMVLGQPGSGCSTFLRSVT 208
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 41.1 bits (92), Expect = 1e-04
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +3
Query: 285 LAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILT 443
L + DL + V K++ K IL +VSG L+ LTA++G + +GKS LL IL+
Sbjct: 758 LCWRDLNFTVVT--KTSKKQILTNVSGYLKKNTLTALLGENKSGKSVLLRILS 808
Score = 33.9 bits (74), Expect = 0.015
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 321 GRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGI 449
G K ++ ++K G L+ G ++G G+G STLL L GI
Sbjct: 83 GPKRDIIPLVKGFDGYLQPGSSLLVLGHEGSGGSTLLKALCGI 125
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 37.9 bits (84), Expect = 0.001
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +3
Query: 159 SNLAGPVDSKPILFDRKGSVKVTITPTQHKTLS----HLPKRQPVDLAFTDLTYKVQEGR 326
+NL SK + D+ + + P + S + K P +AF D+ + +G
Sbjct: 342 ANLVRQAKSKQKIIDKMEAAGLVEKPEPPRQFSFEFDEVRKLPPPIIAFNDVAFSY-DGN 400
Query: 327 KSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGI 449
+ + + +S + AI+G +G GKSTLLN++TG+
Sbjct: 401 LDHA--LYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGL 439
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 339 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGIQDFRY 464
+ ++++ + L G+ ++G +G+GKST L + +D Y
Sbjct: 88 RLLIENATIELNHGQRYGLLGDNGSGKSTFLESVAA-RDVEY 128
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 36.7 bits (81), Expect = 0.002
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 339 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 446
K L +S ++ A++GP+GAGKSTL+ +LTG
Sbjct: 687 KPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTG 722
Score = 30.7 bits (66), Expect = 0.14
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 339 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGIQ 452
K +L RL+ G + GP+G+GKSTL+ + Q
Sbjct: 447 KILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAIVNGQ 484
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 35.9 bits (79), Expect = 0.004
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 285 LAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 446
L T+ +Y +K ++ + +S R AI+GP+GAGKSTL+ +L G
Sbjct: 692 LKMTNASYTYPNAKKKSLDNVTVGLSLSSR----VAILGPNGAGKSTLIKVLIG 741
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 35.5 bits (78), Expect = 0.005
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 324 RKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGIQDFRYGG*Y 476
R N+ +++ +VS + GEL I+GPSG+GKST +++L YG Y
Sbjct: 445 RDENLFSLI-NVSVFIPFGELVHIIGPSGSGKSTFISLLLRYFSPTYGNIY 494
Score = 30.7 bits (66), Expect = 0.14
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 348 LKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 440
L +VS + + E AI+G SG+GKSTL+ +L
Sbjct: 1118 LNNVSLSIEAREKVAIVGISGSGKSTLVELL 1148
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 34.7 bits (76), Expect = 0.009
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 327 KSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 446
K V L+ ++ ++GELT I G GAGKS+LL G
Sbjct: 590 KQQVTPTLRQINFVAKNGELTCIFGKVGAGKSSLLEACMG 629
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 33.9 bits (74), Expect = 0.015
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 369 LRSGELTAIMGPSGAGKSTLLNIL 440
LR G AI+GPS AGKS+L+N+L
Sbjct: 236 LRKGINVAILGPSNAGKSSLINLL 259
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 33.1 bits (72), Expect = 0.026
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 339 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGIQDFRYG 467
K +L ++ + G++ A++G SG GKST++ IL D G
Sbjct: 597 KPVLSDINFVAQPGKVIALVGESGGGKSTIMRILLRFFDVNSG 639
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 32.7 bits (71), Expect = 0.035
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 348 LKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 446
L V+ L G T ++G +GAGKSTLL +L+G
Sbjct: 20 LDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSG 52
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 32.3 bits (70), Expect = 0.046
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 339 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 446
+ +L ++ +R GE A+ G +G+GK+TLL + G
Sbjct: 277 RKVLSDINWTIREGERWALTGSNGSGKTTLLAYVVG 312
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 32.3 bits (70), Expect = 0.046
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 375 SGELTAIMGPSGAGKSTLLNILTGIQD 455
SG++TA++G SG+GKST++ ++ D
Sbjct: 447 SGKITALVGASGSGKSTIIGLVERFYD 473
Score = 29.5 bits (63), Expect = 0.32
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 345 ILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGIQD 455
+L+ ++ ++ G+ A +G SG GKST + ++ D
Sbjct: 1136 VLRGLNLTVKPGQFVAFVGSSGCGKSTTIGLIERFYD 1172
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 31.5 bits (68), Expect = 0.080
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 267 KRQPVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 440
K P L +D+ ++ G ILK V ++ ++GP+GAGKST+L +L
Sbjct: 512 KISPPILQMSDVNFEYVPGHP-----ILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLL 564
Score = 25.8 bits (54), Expect = 4.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 345 ILKSVSGRLRSGELTAIMGPSGAGKSTLLNILT 443
IL S L G + G +G GKSTLL L+
Sbjct: 197 ILTGASLTLAQGRRYGLTGRNGIGKSTLLRALS 229
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 31.1 bits (67), Expect = 0.11
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 342 TILKSVSGRLRSGELTAIMGPSGAGKSTL 428
TILK V+ + E A++G +G+GKSTL
Sbjct: 1227 TILKDVNLHINPSEKVAVVGRTGSGKSTL 1255
Score = 29.9 bits (64), Expect = 0.25
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 381 ELTAIMGPSGAGKSTLLNILTGIQDFRYGG*YNSQR 488
+L+ ++GP+G+GKS+L++ L G G YN R
Sbjct: 642 KLSIVIGPTGSGKSSLISALLGELSLNKGS-YNLPR 676
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 30.7 bits (66), Expect = 0.14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 339 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGIQD 455
+ IL S + +G A +G SG GKST+L +L D
Sbjct: 456 RPILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFRFYD 494
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 30.3 bits (65), Expect = 0.19
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 327 KSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTL 428
+ N+ +L +S ++ E I+G +GAGKSTL
Sbjct: 1234 RENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTL 1267
Score = 28.3 bits (60), Expect = 0.75
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 348 LKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 446
L+ + R GEL I+G G GKS+LL G
Sbjct: 599 LRDIDFVARRGELCCIVGKVGMGKSSLLEACLG 631
Score = 25.8 bits (54), Expect = 4.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 334 MSKRSSSLFRVGSVPASSRPSWV 402
M K S S+FR GS+ +++ W+
Sbjct: 633 MQKHSGSVFRCGSIAYAAQQPWI 655
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 29.5 bits (63), Expect = 0.32
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3
Query: 393 IMGPSGAGKSTLLNIL 440
++GPSG+GKSTL+N L
Sbjct: 37 VVGPSGSGKSTLINTL 52
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 28.7 bits (61), Expect = 0.57
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +3
Query: 381 ELTAIMGPSGAGKSTLLNILT 443
+ T+I+GP+GAGKS L++ ++
Sbjct: 26 DFTSIIGPNGAGKSNLMDAIS 46
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.3 bits (60), Expect = 0.75
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 342 TILKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 440
TI ++ L A++GP+GAGK+TL+ ++
Sbjct: 608 TIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLI 640
Score = 27.9 bits (59), Expect = 0.99
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 339 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 440
K ++K L +G ++ P+G+GKSTLL+ +
Sbjct: 288 KLLIKDSELNLINGRRYGLIAPNGSGKSTLLHAI 321
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 28.3 bits (60), Expect = 0.75
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 384 LTAIMGPSGAGKSTLLNIL 440
+ A+MGP G GKSTL+ L
Sbjct: 76 IVAVMGPPGTGKSTLIKSL 94
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 28.3 bits (60), Expect = 0.75
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 342 TILKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 440
+I ++S + G AI+ PSG GKST+ +L
Sbjct: 498 SIFDNLSFDIHPGTNVAIVAPSGGGKSTISQLL 530
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.9 bits (59), Expect = 0.99
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 348 LKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 446
LK+++ + + T ++G +G+GKSTL L G
Sbjct: 597 LKNLNFTIPRNQFTLVVGSTGSGKSTLAMALLG 629
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 132 KNMELVDKDSNLAGPVDSKPIL---FDRKGSVKVTITPTQHKTL 254
K +V +DS+ + + +P + FDRK S K+T TP+ K+L
Sbjct: 300 KRPSIVRQDSHDSNKLSRRPTINTSFDRKFSPKLTRTPSLTKSL 343
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 327 KSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 440
KS + I + + L I GPSG GKST + +L
Sbjct: 88 KSKISAIKQWMLTDSLESRLLLICGPSGCGKSTAVQVL 125
>SPBC1539.03c |||argininosuccinate lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 118 YCLSLHYDTKDFNMDCDNDASYTR 47
Y S+HYD + FN D D +Y +
Sbjct: 23 YNESIHYDKRMFNADIDGSKAYAK 46
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 387 TAIMGPSGAGKSTLLNILTGIQDFR 461
++I+GP+G+GKS +++ L + FR
Sbjct: 151 SSIVGPNGSGKSNVIDALLFVFGFR 175
>SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 483
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 250 VLCWVGVIVTFTLPFLSKRIGLESTGP 170
VL W V+ T ++PFL KR L P
Sbjct: 283 VLVWSAVVATCSVPFLFKRATLWERDP 309
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 354 SVSGRLRSGEL--TAIMGPSGAGKSTLLNIL 440
SV+ +L + +L + GPSG GKSTLL L
Sbjct: 8 SVASKLVTLKLKPVVVFGPSGVGKSTLLKRL 38
>SPAC222.08c |||imidazoleglycerol-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 443 CEYVEKRRLPGTRRTHDGRELAGTEPTRNRLEDRFDIALP 324
CE ++ +PG T G+ + E R+RLE D LP
Sbjct: 57 CENIDGLIIPGGESTTIGKLINIDEKLRDRLEHLVDQGLP 96
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 393 IMGPSGAGKSTLLNIL 440
++G SG+GKSTL+N L
Sbjct: 100 VLGESGSGKSTLVNTL 115
>SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 571
Score = 25.8 bits (54), Expect = 4.0
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 508 WTGYAXXXXXXXXXXXRKSCIPVSMLRSVDFPA--PDGPMMAVSSPE 374
+TGY+ C+P S ++DFPA GP+ P+
Sbjct: 193 FTGYSGPHSTRIWEMIYNQCLPDSSAPTIDFPALFMQGPLAPPPKPQ 239
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 384 LTAIMGPSGAGKSTLLNILTG 446
+ A++G GKSTLLN L G
Sbjct: 41 VVAVLGSQSTGKSTLLNNLFG 61
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/37 (27%), Positives = 24/37 (64%)
Frame = +3
Query: 321 GRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLL 431
GR+ ++ ++ +S R ++ A++GP+G GK+ ++
Sbjct: 115 GREEEIQRTIQILSRRTKNNP--ALVGPAGVGKTAIM 149
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 25.8 bits (54), Expect = 4.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 457 KSCIPVSMLRSVDFPAPDGPMMAVSSPERSRPET 356
KS +P S S P P + A SSP++SR T
Sbjct: 187 KSRVPSSSSGSFVAPPPQMRLPAYSSPQKSRSNT 220
>SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 351 KSVSGRLRSGELTAIMGPSGAGKS 422
+++ G + G+LT I G SG+GKS
Sbjct: 84 ETLHGGIPVGQLTEICGESGSGKS 107
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 25.4 bits (53), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 105 NDKQYIVNEKNMELVDKDSNLAGPVDSKPILFDRKGSVKVT 227
ND QYI + E K +N+ G VD + L ++G+V T
Sbjct: 409 NDVQYISIKALNEYDPKFTNVTGSVDWRSKLESQRGAVFAT 449
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.4 bits (53), Expect = 5.3
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 384 LTAIMGPSGAGKSTLLNIL 440
L I+GP+G GKST+++ +
Sbjct: 35 LNLIIGPNGTGKSTIVSAI 53
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 388 RPSWVRR-VPGSRRFSTYSQGYKTSGMEGSIT 480
R W +PG+RR TYSQ T+ + T
Sbjct: 437 RDGWTMLPIPGTRRIPTYSQSTSTTNPSATPT 468
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 518 FRKLDRLRSIPLTVILPSIPEVLYPCEYVEKRRLPGTR 405
F+ L R S L LPS + EY + R+ PG R
Sbjct: 47 FQHLYRGLSSVLVSTLPSASSFFFVYEYAKARQKPGVR 84
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 327 KSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLL 431
+ +VK I V+ S EL I GP+ GKST +
Sbjct: 697 QDDVKFIPNDVNLEHGSSELLIITGPNMGGKSTYI 731
>SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 24.6 bits (51), Expect = 9.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 114 QYIVNEKNMELVDKDSNLAGPVDS 185
Q V++KNME+ D ++A P+ S
Sbjct: 154 QMAVDQKNMEMELDDEDIAEPIQS 177
>SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 277
Score = 24.6 bits (51), Expect = 9.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 384 LTAIMGPSGAGKSTLLNIL 440
+ I GP G+GKSTL + L
Sbjct: 27 ILGISGPQGSGKSTLASAL 45
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 24.6 bits (51), Expect = 9.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 393 IMGPSGAGKSTLLNILT 443
++G AGKSTLLN LT
Sbjct: 241 LVGLPNAGKSTLLNCLT 257
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,189,990
Number of Sequences: 5004
Number of extensions: 43544
Number of successful extensions: 191
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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