Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20b03
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydr... 83 3e-16
U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydr... 71 7e-13
AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic anhy... 68 6e-12
U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydr... 55 6e-08
Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic anhyd... 45 7e-05
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 30 1.5
Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical pr... 29 2.6
U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical pr... 28 6.1
>U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydrase
protein 3 protein.
Length = 246
Score = 82.6 bits (195), Expect = 3e-16
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +3
Query: 219 GRQQSPIAISARQAIPISI-PAIELIGYQNPLPGPLTITNTGHSVALTIPKYTSEEEKKG 395
G+ QSPI I + I+ + Y +P+ G I N GHSV +T P+ SE
Sbjct: 21 GQHQSPINIDLGEVERKDTHDGIKFVNYDHPIQGD--IVNNGHSVQMT-PELRSEH---- 73
Query: 396 FRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHR 545
P I+GG LD Y + HFHWG+ +N GSEHTL +R P E+H++H+
Sbjct: 74 ---PEIYGGGLDQVYRLVQYHFHWGENDNEGSEHTLGGLRYPAELHLVHQ 120
>U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydrase
protein 5 protein.
Length = 310
Score = 71.3 bits (167), Expect = 7e-13
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 3/187 (1%)
Frame = +3
Query: 111 IIAVFTLVVINVSVAAGWGYRASD-QRRWAVLHPACGGR-QQSPIAISARQAIPISIPAI 284
++A+ +V GWGY ++ W C +QSPI I A + +
Sbjct: 11 LVALLVVVSCGPGSDHGWGYDENNGPDTW---QGKCQNHLKQSPIDIRAPDVDYALLHRM 67
Query: 285 ELIGYQNPLPGPLTITNTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFH 464
+ Y + G + ++NTG + L + S + K+ P I GG L + Y++ H H
Sbjct: 68 HFLNYD--MDGKIELSNTGRT--LFAGGFESWQHKQ----PMIQGGGLKHRYKLAQFHLH 119
Query: 465 WGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVL-AFFYQVVEFDAK 641
WG + GSEH + + P E+H++H ++ EA+ PDGL V+ F + + A
Sbjct: 120 WGQNDAVGSEHAMGSLHYPAELHLVH-VREGLTLKEALSRPDGLAVVGVFLAKTNDPVAN 178
Query: 642 LLSPIVE 662
SPI E
Sbjct: 179 KFSPISE 185
>AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic
anhydrase protein 6 protein.
Length = 319
Score = 68.1 bits (159), Expect = 6e-12
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = +3
Query: 429 DNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLA 608
+ +Y +D ++FHW + GSEHT+ + EMH+IHRN ++ A+A++ P+G+ +A
Sbjct: 126 EEQYHLDAVNFHWATEPMNGSEHTIGGVGYAGEMHLIHRNTRFATMADALKQPNGVIAIA 185
Query: 609 FFYQVVEFDAKLLSPIV 659
F D + SP++
Sbjct: 186 VFLNESHDDNAVFSPLI 202
>U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydrase
protein 1 protein.
Length = 365
Score = 54.8 bits (126), Expect = 6e-08
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +3
Query: 333 NTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDN-EYEIDGLHFHWGDKNNRGSEHTLND 509
NTG V + I Y+S++ I GPL Y + + FH G KN GSEHT+N
Sbjct: 153 NTGQMVRVRIG-YSSKKPSVN-----ITSGPLYGYRYRVQRIDFHMGRKNENGSEHTING 206
Query: 510 MRLPLEMHIIHRNKK-YRNTAEAMQHPDGLCVLA 608
R P+E+ ++ N Y N A + P G+ +L+
Sbjct: 207 RRFPMEVQLVAYNTDLYPNFTSASKSPHGIAILS 240
>Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical
protein R01E6.3b protein.
Length = 235
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 432 NEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAF 611
+++ + H HWG + GSEH L+ +L E+H + N Y + A+ PDGL V+
Sbjct: 68 SKFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYESFNVALSKPDGLAVVGV 127
Query: 612 F 614
F
Sbjct: 128 F 128
>Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical
protein R01E6.3a protein.
Length = 280
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 432 NEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAF 611
+++ + H HWG + GSEH L+ +L E+H + N Y + A+ PDGL V+
Sbjct: 113 SKFALAQFHAHWGSNSKEGSEHFLDGKQLSGEVHFVFWNTSYESFNVALSKPDGLAVVGV 172
Query: 612 F 614
F
Sbjct: 173 F 173
>U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic
anhydrase protein 2 protein.
Length = 337
Score = 44.8 bits (101), Expect = 7e-05
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Frame = +3
Query: 192 WAVLHP----ACGGRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVALT 359
W +LH G+ QSP+ I Q + P + I + + + NTG +T
Sbjct: 20 WGLLHGDWRMCTAGQMQSPVNIDPSQLL--YDPHLMPINIEGNIVEAV-FENTGQLPVVT 76
Query: 360 IPKYTSEEEKKGFRLPYIFGGP-LDNEYEIDGLHFHWG--DKNNRGSEHTLNDMRLPLEM 530
+ + I GGP + Y++ + H+G D+ +GSEHT++ +R P E+
Sbjct: 77 VKDLPNRPTIN------ITGGPTMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEI 130
Query: 531 HIIHRNKK-YRNTAEAMQHPDGLCVLAFFYQV 623
++ N Y N + AM P GL ++ +
Sbjct: 131 QLLAYNSALYPNFSVAMTSPRGLLAVSVIVDI 162
>Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 532 CISKGRRISFNVCSDPLLFLSPQWKCRPSISYSLSRGPPKM*GRRKPFFSS 380
C G+ I V +D L LS + C PSIS LS + + FSS
Sbjct: 249 CSLIGKLIELEVSTDEYLLLSMMFFCDPSISTELSSHAKNELSKHQKIFSS 299
>AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 532 CISKGRRISFNVCSDPLLFLSPQWKCRPSISYSLSRGPPKM*GRRKPFFSS 380
C G+ I V +D L LS + C PSIS LS + + FSS
Sbjct: 249 CSLIGKLIELEVSTDEYLLLSMMFFCDPSISTELSSHAKNELSKHQKIFSS 299
>Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical
protein R03A10.3 protein.
Length = 709
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 572 FRGVSVFLIPMDDVHFQRKTHIVQCVLRSSVVLVTPVEMQTID 444
F+ FLI DDV KTH C+L +++V + +QT D
Sbjct: 481 FKNDREFLIVNDDVTLNLKTHPELCMLTATIVDDDQLLIQTFD 523
>U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical
protein T10E9.3 protein.
Length = 583
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 204 HPACGGRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLT-ITNTGHSVALTIPKYTSE 380
HP G S + S+ + +S +L+ P+P P+T N V K SE
Sbjct: 425 HPLTGVDAPSSVTSSSSSSSSLSTAGPQLVSSSTPIPVPMTPEKNHVFEVDNQTTKTVSE 484
Query: 381 EEKK 392
E KK
Sbjct: 485 EPKK 488
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,573,408
Number of Sequences: 27780
Number of extensions: 401987
Number of successful extensions: 993
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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