Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20b02
         (240 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    22   3.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   3.4  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    21   4.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    21   6.0  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
 Frame = +3

Query: 72   FDVL*HACYVFIYLLTAQYGQ-------NKLKLTMSDEMAVIDNGGTEETNTESIEKVDT 230
            FD++  +   +I  ++AQY +         L    + E+ V D GG   T  ES++   T
Sbjct: 1210 FDIVDPSGIFYIQQVSAQYAEIYSRGPLKNLHGNYTLELIVSDLGGVPNTARESVDICVT 1269

Query: 231  D 233
            D
Sbjct: 1270 D 1270


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 77  CVVARVLCVHLLIDGTVR 130
           CV+A ++ +H+LID   R
Sbjct: 815 CVIAGMMPLHILIDEDYR 832


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 35  DDFPLYWSK 9
           DDFPL WS+
Sbjct: 142 DDFPLSWSE 150


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 77  CVVARVLCVHLLIDGTVRS 133
           CV+A ++ +HLL+D   R+
Sbjct: 810 CVLAGMIPLHLLLDEDSRT 828


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,167
Number of Sequences: 2352
Number of extensions: 3819
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11422398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)