Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt20b02
         (240 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   2.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   2.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   2.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   4.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    19   6.4  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 174 IDNGGTEETNTESIEKVD 227
           ++ G  EETN+E   + D
Sbjct: 297 VEEGNVEETNSEETHQKD 314


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 174 IDNGGTEETNTESIEKVD 227
           ++ G  EETN+E   + D
Sbjct: 212 VEEGNVEETNSEETHQKD 229


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 174 IDNGGTEETNTESIEKVD 227
           ++ G  EETN+E   + D
Sbjct: 531 VEEGNVEETNSEETHQKD 548


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 174 IDNGGTEETNTESIEKVDTDVE 239
           +DN      NTE+    D+D+E
Sbjct: 177 LDNQEVSMENTENKSCTDSDIE 198


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 95  TRVLQHIKRLDSE 57
           +RV  H+KRLD +
Sbjct: 504 SRVRAHLKRLDHQ 516


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,024
Number of Sequences: 438
Number of extensions: 760
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)