Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20a21
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 151 7e-37
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 149 2e-36
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 141 6e-34
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 93 2e-19
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 75 6e-14
07_03_1086 + 23858419-23859423,23859527-23859610 38 0.006
02_05_0680 - 30824652-30826010 38 0.006
11_06_0506 - 24380469-24380632,24381737-24383893,24384488-243845... 38 0.011
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 36 0.026
01_01_0334 - 2698347-2699020,2699321-2699477,2699576-2699647,269... 35 0.059
03_04_0180 + 18173005-18173976,18174066-18174170 35 0.078
07_03_0997 - 23203166-23203330,23203627-23203693,23203771-232038... 34 0.14
07_03_0889 - 22316945-22317062,22317149-22318794 32 0.42
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 32 0.42
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254... 32 0.55
03_02_0538 + 9299639-9300046,9300362-9300509,9300648-9300652,930... 32 0.55
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 31 0.73
07_03_0424 - 18060133-18061581 31 0.96
01_06_0496 - 29795490-29796638,29796811-29796870,29798168-297983... 31 0.96
07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,779... 30 1.7
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 29 2.9
07_03_0429 + 18103724-18105196 29 3.9
07_03_0425 - 18070607-18070712,18071771-18072744 29 3.9
05_06_0212 + 26410330-26410419,26410562-26410846,26411005-264112... 29 3.9
02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129 29 3.9
09_04_0127 + 14883661-14884226,14884335-14885235 29 5.1
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 29 5.1
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 29 5.1
01_03_0071 + 12203227-12203368,12203551-12203703,12204622-122046... 29 5.1
01_02_0128 + 11407888-11408241 29 5.1
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 28 6.8
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 28 9.0
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173... 28 9.0
07_01_0180 + 1266975-1267550 28 9.0
02_03_0380 + 18335903-18337837 28 9.0
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 151 bits (365), Expect = 7e-37
Identities = 84/190 (44%), Positives = 121/190 (63%), Gaps = 8/190 (4%)
Frame = +1
Query: 193 TDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRN--VPISYSTDEEEI 366
+++A+ R +K A D DE RRRR + VE+RK++REE+L K+R +P + +
Sbjct: 6 SERAEVRRSRYKVA-VDADEGRRRREDNMVEIRKSRREESLLKKRRDGLPAAAAAAAAAS 64
Query: 367 DKNLATTDLDE------LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILP 528
++ L + ++ A +++ QL A Q RKLLS +++PPI+E+I G++P
Sbjct: 65 PLLAHSSALQQKLEGLPAMVQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINTGVVP 124
Query: 529 ILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQA 708
+ L R D P LQFE AWALTNIASGTS T VV +GAVP+F++LL SP E+V +QA
Sbjct: 125 RFIAFLQREDYPQLQFEAAWALTNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDVREQA 184
Query: 709 VWALGNIIGD 738
VWALGN+ GD
Sbjct: 185 VWALGNVAGD 194
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 535 VQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVW 714
+Q L + + + + WAL+ ++ GT+ + V+ +G P ++LLM P +V A+
Sbjct: 253 LQRLIHSQDEEVLTDACWALSYLSDGTNDKIQAVIESGVFPRLVELLMHPSASVLIPALR 312
Query: 715 ALGNII-GD 738
+GNI+ GD
Sbjct: 313 TVGNIVTGD 321
Score = 35.5 bits (78), Expect = 0.045
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 2/143 (1%)
Frame = +1
Query: 304 EETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCD 483
E T Q R+ + I S EE+ + T + + + P+ Q A + S
Sbjct: 97 EATTQFRKLLSIERSPPIEEV---INTGVVPRFIAFLQREDYPQLQFEAAWALTNIAS-G 152
Query: 484 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHA--GAVP 657
+ ++ +G +PI V+ LS + + WAL N+A G S + +V A G P
Sbjct: 153 TSDNTKVVVESGAVPIFVKLLSSPSEDVRE-QAVWALGNVA-GDSPKCRDLVLASGGLYP 210
Query: 658 VFLQLLMSPHENVCDQAVWALGN 726
+ QL ++ A W L N
Sbjct: 211 LLQQLNEHAKLSMLRNATWTLSN 233
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 662 NTGTAPAWTTLFVCADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIP 516
NTG P + D P+ F A A++N +G S + G++P
Sbjct: 119 NTGVVPRFIAFLQREDYPQLQFEAAWALTNIASGTSDNTKVVVESGAVP 167
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 149 bits (361), Expect = 2e-36
Identities = 88/187 (47%), Positives = 121/187 (64%), Gaps = 11/187 (5%)
Frame = +1
Query: 211 RMHVFKNAGK---DVDEMRRRRNEVTVELRKNKREETLQKRRN--------VPISYSTDE 357
R+ V +N K D +E RRRR + VE+RK++REE+L K+R VP S +T
Sbjct: 8 RVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASAATG- 66
Query: 358 EEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILV 537
+DK L + L ++ + +N QL A Q RKLLS +++PPI+E+I +G++P V
Sbjct: 67 --VDKKLES--LPAMIGGVYSDDN-NLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFV 121
Query: 538 QCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWA 717
Q L+R D P LQFE AWALTNIASGTS T V+ GAVP+F++LL S ++V +QAVWA
Sbjct: 122 QFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWA 181
Query: 718 LGNIIGD 738
LGN+ GD
Sbjct: 182 LGNVAGD 188
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 523 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCD 702
LP L + + D L + WAL+ ++ GT+ + V+ AG P ++LL+ P +V
Sbjct: 244 LPALARLIHSNDEEVLT-DACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLI 302
Query: 703 QAVWALGNII-GD 738
A+ +GNI+ GD
Sbjct: 303 PALRTVGNIVTGD 315
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +1
Query: 427 NPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 606
N E L LS N I +I AG+ P LV+ L +P++ + NI
Sbjct: 254 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHP-SPSVLIPALRTVGNIV 312
Query: 607 SGTSAQTNKVVHAGAVPVFLQLL-MSPHENVCDQAVWALGNI 729
+G AQT ++ A+P L LL + +++ +A W + NI
Sbjct: 313 TGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNI 354
Score = 31.1 bits (67), Expect = 0.96
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 499 DELIAAG-ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 675
D ++A G +LP+L Q L+ ++ W L+N G + + A+P +L+
Sbjct: 194 DLVLANGALLPLLAQ-LNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRP-ALPALARLI 251
Query: 676 MSPHENVCDQAVWAL 720
S E V A WAL
Sbjct: 252 HSNDEEVLTDACWAL 266
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 141 bits (341), Expect = 6e-34
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 5/174 (2%)
Frame = +1
Query: 232 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDE---EEIDKNLATTDLDEL 402
A D E RRRR ++TV LRK R+ L+++R P + + E + + L+ L
Sbjct: 18 ASMDAAEGRRRREDITVILRKADRDRALKEKRRRPTATAAAEGLPQAAHSSAIEKKLESL 77
Query: 403 VMNAAN--AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQF 576
M +++ QL + Q RKLLS D PPIDE+I +G+LP V+ L+R + P LQF
Sbjct: 78 PMMVQGLYSDDSSMQLESTTQFRKLLSVDHCPPIDEVIRSGVLPRFVEFLTREEYPQLQF 137
Query: 577 ETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 738
E AWALTNIASGT+A T V+ GAVP+F++LL SP E+ AVWALGN+ GD
Sbjct: 138 EAAWALTNIASGTAANTMAVIEHGAVPIFVKLLSSPRED----AVWALGNVAGD 187
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 523 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCD 702
LP L L+ +++ E W ++NI +GT Q V+ + + L LL +V
Sbjct: 328 LPCLFNLLTTTQKKSVKREACWTISNITAGTKEQIQAVIDSNIIAPLLHLLQHAEFDVKK 387
Query: 703 QAVWALGN 726
+AVWA+ N
Sbjct: 388 EAVWAISN 395
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +1
Query: 505 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSP 684
L+ +LP+L Q A L+ +AW L+N G K V A+PV +L++S
Sbjct: 196 LMHGAMLPLLQQLNEHAKLSMLR-NSAWTLSNFCRGKPQPDFKHVEP-ALPVLRELILSQ 253
Query: 685 HENVCDQAVWAL 720
E + + WAL
Sbjct: 254 DEEILTDSCWAL 265
Score = 33.9 bits (74), Expect = 0.14
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
Frame = +1
Query: 304 EETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCD 483
E T Q R+ + + + ID+ + + L V E P+ Q A + S
Sbjct: 94 ESTTQFRKLLSVDHCPP---IDEVIRSGVLPRFVEFLTREEYPQLQFEAAWALTNIASGT 150
Query: 484 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKV-VHAGAVPV 660
+ +I G +PI V+ LS A+ WAL N+A ++ N V +H +P+
Sbjct: 151 AANTM-AVIEHGAVPIFVKLLSSPREDAV-----WALGNVAGDSTKCRNLVLMHGAMLPL 204
Query: 661 FLQLLMSPHENVCDQAVWALGN 726
QL ++ + W L N
Sbjct: 205 LQQLNEHAKLSMLRNSAWTLSN 226
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 93.5 bits (222), Expect = 2e-19
Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +1
Query: 346 STDEEEIDKNLATTDLDEL--VMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAG 519
S E + A ++L+ L ++ +++ +QL A Q R+LLS +KNP + ++I A
Sbjct: 95 SPPAESVPPTAADSELEGLSEMVEKVWSDDTTSQLEATIQFRRLLSDEKNPTVIKIIRAD 154
Query: 520 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVC 699
+LP LSR ++P LQ E AW LTNIA+ S T V GAVP ++LL S + N+
Sbjct: 155 VLPRFSDFLSRHEHPQLQMEAAWVLTNIAA--SDYTLLVAECGAVPRLVELLESANANIR 212
Query: 700 DQAVWALGNIIGD 738
QA+WALGNI D
Sbjct: 213 HQAIWALGNIAAD 225
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 424 ENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNI 603
E+P+ Q+ A + + D + E G +P LV+ L A N ++ + WAL NI
Sbjct: 167 EHPQLQMEAAWVLTNIAASDYTLLVAE---CGAVPRLVELLESA-NANIRHQAIWALGNI 222
Query: 604 ASGTSAQTNKVVHAGAV-PVFLQLLMSPHENVCDQAVWALGNI 729
A+ V+ GAV P+ Q V A WAL N+
Sbjct: 223 AADVPTCREIVLDHGAVTPLLAQFREGMKVPVLRTATWALSNL 265
Score = 36.3 bits (80), Expect = 0.026
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = +1
Query: 520 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVC 699
IL I+ Q + D L + WAL I G S V+ AGA P + LLM N+
Sbjct: 279 ILDIISQLIHSVDEKILG-DACWALCYICDGVSDGIQHVLDAGACPQLVNLLMHASANIL 337
Query: 700 DQAVWALGNI 729
+ L I
Sbjct: 338 LPVITVLARI 347
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 211 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 327
R+ +K G DV RRRR + + +R++ R+ L KRR
Sbjct: 14 RLAAYK-PGVDVARSRRRREDRLLAVRRSNRDAGLFKRR 51
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 472 LSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIAS-GTSAQTNKVVHAG 648
+S I +I A ++ L+ L ++ ++ E AWA++N AS G++ Q +V G
Sbjct: 390 ISTGSKDNIQAVIDADVISPLIFLLKTSEKD-IKEEAAWAISNAASGGSNDQIQYLVSRG 448
Query: 649 AVPVFLQLLMSPHENVCDQAVWALGNII 732
+ +L ++ + L NI+
Sbjct: 449 CLEPLCNVLTYQDADLVYACLEGLQNIL 476
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 74.9 bits (176), Expect = 6e-14
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Frame = +1
Query: 166 ETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR--NVPI 339
++AS + ++ K++ ++ RRR E + + K +RE ++ +R PI
Sbjct: 4 DSASPSPSSASPLQHHREALKSSVRNTAASRRR--EQAIAIGKERREALIRAKRVCRAPI 61
Query: 340 SYSTDEEEIDKNLATTDLDELVMNAANAENPEA---------------QLAAVQQCRKLL 474
S S DE E+++ D ++ + A A E ++ A++ R+LL
Sbjct: 62 SGS-DEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQGKGVQKKKIEALRDLRRLL 120
Query: 475 SCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 654
S + P +D I AG +P+LVQ LS + E AW LTNIA+G +T ++ A+
Sbjct: 121 SQPEVPLVDTAIKAGAVPLLVQYLSFGSSDEQLLEAAWCLTNIAAGEPEETKSLL--PAL 178
Query: 655 PVFLQLLMSPHEN-VCDQAVWALGNIIGD 738
P+ + L V +Q WA+GN+ G+
Sbjct: 179 PLLIAHLGEKSSTLVAEQCAWAIGNVAGE 207
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/66 (34%), Positives = 43/66 (65%)
Frame = +1
Query: 532 LVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAV 711
L++CL ++DN L+ E++WAL+NIA+G+ + + A PV ++L+ S ++ +A
Sbjct: 335 LIKCL-KSDNRVLRKESSWALSNIAAGSFEHKKLIFASEATPVLIRLVTSMQFDIRREAA 393
Query: 712 WALGNI 729
+ LGN+
Sbjct: 394 YTLGNL 399
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/100 (23%), Positives = 45/100 (45%)
Frame = +1
Query: 433 EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASG 612
+ QL C ++ + L+ A LP+L+ L + + + AWA+ N+A
Sbjct: 150 DEQLLEAAWCLTNIAAGEPEETKSLLPA--LPLLIAHLGEKSSTLVAEQCAWAIGNVAGE 207
Query: 613 TSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNII 732
+ + ++ GA+ +L+ S + A WA+ N+I
Sbjct: 208 GAELRSTLLAQGALRPLTRLMFSSKGSTARTAAWAMSNLI 247
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +1
Query: 427 NPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 606
+P Q V L CD+N I ++ AG + LV L A +PA + A AL ++
Sbjct: 118 DPLLQEHGVTALLNLSICDENKAI--IVEAGAIRPLVHALKSAASPAARENAACALLRLS 175
Query: 607 SGTSAQTNKVVHAGAVPVFLQLL 675
+ + AGA+P+ + LL
Sbjct: 176 QLDGSAAASIGRAGAIPLLVSLL 198
>02_05_0680 - 30824652-30826010
Length = 452
Score = 38.3 bits (85), Expect = 0.006
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = +1
Query: 337 ISYSTDEEEIDK-NLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIA 513
I+ S D + ++ + A D LV A +P+A AA+ L+ D L+
Sbjct: 253 IASSCDNQCLEAMSKANAMYDALVNLVAKPVSPQATKAALVTAYYLVKNDIEHAASRLVD 312
Query: 514 AGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHEN 693
G + +LV+ L+ AD + A L + A+ HA AVPV + M +
Sbjct: 313 LGTVELLVELLADADKGTTEKALA-VLDTVLVAAKARDRAYAHALAVPVLAKKTMHVSDM 371
Query: 694 VCDQAVWAL 720
+ AV AL
Sbjct: 372 ATEFAVSAL 380
>11_06_0506 -
24380469-24380632,24381737-24383893,24384488-24384541,
24384543-24384597,24384914-24384916,24385192-24385231,
24385576-24385632,24388124-24388412,24389764-24389771,
24390633-24390688,24391207-24391488,24391651-24391811,
24391887-24392121,24392860-24392943,24393022-24393117,
24393333-24394055,24396523-24396987
Length = 1642
Score = 37.5 bits (83), Expect = 0.011
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Frame = +1
Query: 310 TLQKRRNVPISYSTDE-----EEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLL 474
+L+ RR V I + E EE L + L+++A + + ++AA + +
Sbjct: 365 SLESRRAVTILLALAELCSKLEESRSQLMSVQASTLILDALKHASVDIRVAACSCLKNIS 424
Query: 475 SCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 654
K +L + LVQ L + + ++Q A+ NIA + + + ++ +GAV
Sbjct: 425 RSSKVLSAGKLSCDTFIAPLVQLLYDS-SMSVQVAALGAICNIAVNLTPRKSILLQSGAV 483
Query: 655 PVFLQLLMSPHENVCDQAVWALGNII 732
+ L S + +AVWAL NI+
Sbjct: 484 SQLVHLSKSMDPTLRLKAVWALRNIM 509
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 502 ELIAAGILPILVQCLSRAD-NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 678
+ + G +P +V L+ +PA + A A+ + A G V+ AGAV +LL
Sbjct: 91 QYLRLGAVPAVVAALAGPGASPAALVQAAAAVGSFACGVDDGVRAVLAAGAVAHLTRLLA 150
Query: 679 SPHENVCDQAVWAL 720
P E V D + AL
Sbjct: 151 HPDEKVVDASARAL 164
>02_01_0014 -
87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 36.3 bits (80), Expect = 0.026
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Frame = +1
Query: 403 VMNAANAENPEA-QLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADN------ 561
+++ ++ E+ QL ++ Q ++LS + +PILV L ++
Sbjct: 88 ILSGLQSDGDESRQLQSLMQLCEMLSIGTEESLAAFPVDAFVPILVGLLGPGEDGAGGAS 147
Query: 562 PALQFETAWALTNIASGTSAQTNKVVHAGAVPVF-LQLLMSPHENVCDQAVWALGNI 729
P + A AL N+ + + VVH GA+P F +LL + ++ +Q++ AL I
Sbjct: 148 PDVMLLAARALANLVDVLPSSCSAVVHYGAIPCFCARLLTIEYMDLAEQSLQALKKI 204
>01_01_0334 -
2698347-2699020,2699321-2699477,2699576-2699647,
2699697-2700641,2701183-2701259,2701908-2702064
Length = 693
Score = 35.1 bits (77), Expect = 0.059
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 232 AGKDVDEMRRRRNEVTVELRKNKRE----ETLQKRRNVPISYSTDEEEIDKNLATTDLDE 399
A + V++ RR +T L K + Q +R + S ST + +D T L
Sbjct: 240 AKRPVNQGFRRSRSLTESLEKYSHLLDSISSNQSKRTLTSSKSTRDHSLDAPAVMTGLQS 299
Query: 400 LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDEL 507
LVM A N PE LA R ++ D + +DE+
Sbjct: 300 LVMTAENLVIPEHALAPYVPERIIVDGDVDAAMDEI 335
>03_04_0180 + 18173005-18173976,18174066-18174170
Length = 358
Score = 34.7 bits (76), Expect = 0.078
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 424 ENPEAQLAAVQQCR-KLLSCDKNPPIDEL--IAAGILPILVQCLSRADNPALQFETAWAL 594
E+P + L +++ +L K+ P + L +AAG LP LV LSR D P LQ AL
Sbjct: 59 ESPASSLDDLRRAAMELRLLAKHSPDNRLRIVAAGALPPLVALLSRPD-PLLQEHGVTAL 117
Query: 595 TNIASGTSAQTNKVVHAGAVPVFLQLLMS 681
N+ S VV AGAV ++ L S
Sbjct: 118 LNL-SLREDNRGAVVDAGAVGPLVRALRS 145
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 505 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 681
++ AG + LV+ L A +PA + A L +A + + AGAVPV + LL S
Sbjct: 130 VVDAGAVGPLVRALRSAASPAARENAACTLLRLAQLDGSAAAAIGRAGAVPVLVSLLES 188
>07_03_0997 -
23203166-23203330,23203627-23203693,23203771-23203862,
23204820-23204956,23205050-23205116,23205212-23205278,
23205356-23205441,23206061-23206153,23206337-23206522,
23207316-23207372,23207455-23207582,23207662-23207731,
23207815-23207950,23208378-23208529,23208606-23208680,
23208765-23208929,23209063-23209128,23209229-23209333,
23209929-23210132,23210462-23211715
Length = 1123
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/110 (22%), Positives = 46/110 (41%)
Frame = +1
Query: 400 LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFE 579
+++N + + AA+ +L S D P + +LP L + NP +Q
Sbjct: 430 MILNGFQHPHARVRWAAINAIGQL-STDLGPDLQVNYHQQVLPALANAMDDFQNPRVQAH 488
Query: 580 TAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNI 729
A A+ N + + + G V L LL + + V + A+ AL ++
Sbjct: 489 AASAILNFSENCTPEILTPYLDGIVTKLLVLLQNGKQMVQEGALTALASV 538
>07_03_0889 - 22316945-22317062,22317149-22318794
Length = 587
Score = 32.3 bits (70), Expect = 0.42
Identities = 26/85 (30%), Positives = 36/85 (42%)
Frame = +1
Query: 421 AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTN 600
A E AA + R L D+ + AG P+LV A + A Q + L
Sbjct: 298 ASGGELVCAACRVLRSLAGVDEIRKY-MVAEAGAAPVLVSLCRGAADEAAQIQAMELLAA 356
Query: 601 IASGTSAQTNKVVHAGAVPVFLQLL 675
IASG S+ V+ GAV + +L
Sbjct: 357 IASGDSSVREAVLQEGAVESLVSVL 381
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/79 (22%), Positives = 37/79 (46%)
Frame = +1
Query: 163 VETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPIS 342
+E A + +A + + + + A +EM+ +R T + ++ K+++ QK+ N +
Sbjct: 442 IEVAYQEAVALKRQEELIREEEEAWLLENEMKGKRGSTTEKDKRAKKKQAKQKKNNRKVK 501
Query: 343 YSTDEEEIDKNLATTDLDE 399
EE+ D N DE
Sbjct: 502 DKDREEKCDSNFPERSQDE 520
>05_04_0228 -
19224901-19224991,19225095-19225219,19225293-19225410,
19225554-19225618,19225760-19225839,19225942-19226005,
19227341-19227480,19227571-19227694,19227781-19227840,
19227922-19227990,19228139-19228288,19229182-19229289,
19229573-19229648,19229960-19230054,19231729-19231803,
19231923-19232043,19232136-19232308,19232647-19232813,
19232944-19233301
Length = 752
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 517 GILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENV 696
G +P LV+ L D +Q A AL +A +++V A+P + +L S +
Sbjct: 236 GGIPPLVELLESQDLK-VQRAAAGALRTLAFKNDENKSQIVDCNALPTLILMLRSEDAAI 294
Query: 697 CDQAVWALGNII 732
+AV +GN++
Sbjct: 295 HYEAVGVIGNLV 306
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +1
Query: 502 ELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 681
E++ AG L ++ LS + Q E A L AS S +V GAV +++L S
Sbjct: 315 EVLNAGALQPVIGLLSSCCTES-QREAALLLGQFASADSDCKVHIVQRGAVRPLIEMLQS 373
Query: 682 PHENVCDQAVWALGNI 729
+ + + +ALG +
Sbjct: 374 ADVQLREMSAFALGRL 389
>03_02_0538 +
9299639-9300046,9300362-9300509,9300648-9300652,
9302886-9303290,9303379-9304608
Length = 731
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 511 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 690
A+G +P LV LS + + A AL N+ K V AG +PV L L+
Sbjct: 515 ASGAIPALVLLLSNGSQRGKR-DAATALFNLCI-YQGNKGKAVRAGLIPVLLGLVTETES 572
Query: 691 NVCDQAV 711
+ D+A+
Sbjct: 573 GMMDEAL 579
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +1
Query: 268 NEVTVELRKNKREETLQKRRNVPISYSTDEEEID 369
+EV ++ RK+ + E +K+R+V SYS+ + E++
Sbjct: 418 SEVDIDTRKHPKREHRKKKRDVTESYSSSDSEVE 451
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 157 YCVETASTDKMATDQAKNRMHVFKNAGKDVDE-MRRRRNEVTVELRKNKREETLQKRRNV 333
YC +++ + A +A+ K+ K + E + + EV + R++++ E +K+RN+
Sbjct: 352 YCSDSSFSG--AEVEARKSKQKSKHKKKHLPESLSDSKVEVGRDTRRHQKREHRKKKRNI 409
Query: 334 PISYSTDEEEID 369
S S+ + E+D
Sbjct: 410 TESESSSDSEVD 421
>07_03_0424 - 18060133-18061581
Length = 482
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 490 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 606
PP+ ++A G+LP V PAL F TA A + +A
Sbjct: 113 PPVTCVVADGLLPFAVDVAEELGVPALSFRTASACSFLA 151
>01_06_0496 -
29795490-29796638,29796811-29796870,29798168-29798371,
29798739-29798984,29799375-29799464
Length = 582
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +1
Query: 187 MATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI 366
M T+ AK + +V K++ VD + ++++N R+ + +VP S ++ E++
Sbjct: 259 METESAKLKRNVRKSSAVTVDSFQTNMTVEPEKIKRNSRKFSSSAADSVPDSQLSELEKV 318
Query: 367 DKNL 378
+NL
Sbjct: 319 KRNL 322
>07_01_0010 +
72162-74303,74470-74545,75971-76043,76496-76540,
77916-78116,78463-78541,78637-78678,78788-78847,
79087-80484,80777-80902,81037-81300
Length = 1501
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -3
Query: 546 KALN*DGEYSSSYELINRRVFITREQFSALLHSSQLCFRVFCVGSVHHQLIKVGGSEVLV 367
K N D Y E+I + + F +++S + RVF + H ++K+G +V
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676
Query: 366 DLLL 355
D +L
Sbjct: 677 DTIL 680
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Frame = +1
Query: 298 KREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQ-----C 462
K +E +KRR YS EE+I +L++ M A + E EA+L +++
Sbjct: 238 KCDERAEKRREF---YSKLEEKIHAQ----ELEKSNMQAKSKETEEAELKKLRKSLNFRA 290
Query: 463 RKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH 642
+ S K PP ++ + + VQ SR P +F ++W + + + +VH
Sbjct: 291 NPMPSFYKEPPPPKV---ELKKLYVQVHSRGRPPTPKFNSSWVWSGVVEQPEPCSTSLVH 347
>07_03_0429 + 18103724-18105196
Length = 490
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 490 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 606
PP+ ++A +LP + PAL F TA A + +A
Sbjct: 120 PPVTTVVADALLPFAIDVAEELGVPALAFRTASACSFLA 158
>07_03_0425 - 18070607-18070712,18071771-18072744
Length = 359
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 490 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 606
PP+ ++A GI+P+ + PAL F T A + +A
Sbjct: 121 PPVTCVVADGIMPLAIDIAEEIGVPALGFRTVSACSFLA 159
>05_06_0212 +
26410330-26410419,26410562-26410846,26411005-26411208,
26411636-26411692,26411859-26412926
Length = 567
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 187 MATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI 366
M T+ K + + +++ V+ + T + R+N R+ T +VP S T+ E++
Sbjct: 273 METESGKLKRNSRRSSAAPVESSQTNIAMETEKSRRNPRKFTSSTADSVPESQLTELEKV 332
Query: 367 DKNLATTDLDELVMNAANAENPEAQLAAVQ--QCRK 468
+NL + + A+ P ++ Q QC K
Sbjct: 333 KRNL--RKVTNSMAEASKVSTPATEIPERQEVQCEK 366
>02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129
Length = 209
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 226 KNAGKDVDEMRRRRNE----VTVELRKNKREETLQKRRNVPISYSTDEEE 363
KN GK+ +E + R+ +ELR + E+ ++ + P++ + EEE
Sbjct: 4 KNQGKEEEEKQYRKERDVLWTRIELRDREEEKNTGRQEHAPLNLTAREEE 53
>09_04_0127 + 14883661-14884226,14884335-14885235
Length = 488
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 511 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 678
A +P V L+ +D P Q + A+ L +A + A + AGA L+L +
Sbjct: 322 APDAVPAFVDVLNWSDEPGCQEKAAYILMVLAHRSYADRAAMAEAGATSALLELTL 377
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +1
Query: 271 EVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAA 450
+V E RK K EE+ VP + EE I K TD +EL+ N + E +
Sbjct: 183 KVENEERKQKDEES----NGVPKVNISPEEAIAKLAKDTD-NELI--EINKQLEELRQMV 235
Query: 451 VQQCRKLLSCDK 486
VQ+CRK+ + +K
Sbjct: 236 VQKCRKMTTYEK 247
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 229 NAGKDVDEMRRRRNEVTVELRKNKREE---TLQKRRNVPISYSTDEEEIDKNLATTDLDE 399
N K + +R+R K ++ T K+RN + Y TDE+E D + +D +E
Sbjct: 414 NIRKGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEE 473
>01_03_0071 +
12203227-12203368,12203551-12203703,12204622-12204683,
12204749-12204830,12206029-12206126,12206240-12206657,
12206793-12206915,12207159-12207178
Length = 365
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 265 RNEVTVELRKNKRE--ETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEA 438
RN V+ L+K K + QK + +PI +T+ I + L + +MN ++ +
Sbjct: 171 RNTVSSYLQKYKAYLLKQEQKDQQLPIDDNTNTSSIKSQQGSASLQQQIMNYGENDSMDN 230
Query: 439 QLAAVQQCRKLLSCDKNPPI 498
Q + Q R +K P +
Sbjct: 231 QSIILSQTRYNEHSNKQPKL 250
>01_02_0128 + 11407888-11408241
Length = 117
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 527 GSIPAAMSSSIGGFLSHESSFLHC 456
G + + S + GGF+SH+ S HC
Sbjct: 76 GGVSSTESRARGGFISHDMSLCHC 99
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = +1
Query: 196 DQAKNRMHVFKNAGKDVDEMRRRRNEV-----TVELRKNKREETLQKRRNVPISYSTDE- 357
D A R + + K+ E RR++ T +LRK R+ LQKRR+ I DE
Sbjct: 195 DAANTRKLMERQLSKEEQEEITRRSQAMDKNDTSDLRKFSRQAYLQKRRDKKIDEIRDEI 254
Query: 358 ---EEIDKNLATTDLDE 399
E I +++ T+ +E
Sbjct: 255 LDHEYIFQDVKLTEAEE 271
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 247 DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKN 375
+E RRR+ + + R ++ LQK++ + S DEEE++ N
Sbjct: 443 EEARRRKEAIMAKYR----QQQLQKQQLESLPRSNDEEEVEMN 481
>09_06_0001 +
20114108-20115686,20115813-20115928,20116416-20117394,
20118820-20119082
Length = 978
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 184 KMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 363
++ TD+ K + + K+ +DE+ +R NE + +KN++ + + + I D EE
Sbjct: 635 RVKTDKDKLKKDIQKSKFLSIDEVFKRLNE---QKKKNEKPDLISLFEDQKI-MKQDLEE 690
Query: 364 IDKNLATTDLDE 399
I K L +L E
Sbjct: 691 IRKRLYMLELKE 702
>07_01_0180 + 1266975-1267550
Length = 191
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 235 GKDVDEMRRRRNEVTVELRKNKREETLQKRRNV-PISYSTDEEEIDKNLATTDLDELVMN 411
G+D +E RRRR + R++ R ++R+ V + + DE ++ + LD
Sbjct: 67 GEDGEEERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDATARR 126
Query: 412 AANAENPEAQ 441
A A+
Sbjct: 127 ALAVRGANAR 136
>02_03_0380 + 18335903-18337837
Length = 644
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 316 QKRRNVPISYSTDEEEIDKNLATTDLDELVMNAA 417
Q++R P+ Y T EEI A LDEL A
Sbjct: 420 QQKREFPLGYKTFGEEIPPQYAIQVLDELTKGEA 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,556,540
Number of Sequences: 37544
Number of extensions: 439575
Number of successful extensions: 1354
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -