Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20a19
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical pr... 124 7e-29
U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory ... 99 3e-21
Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 87 1e-17
Z81512-4|CAB04170.1| 550|Caenorhabditis elegans Hypothetical pr... 82 5e-16
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 50 2e-06
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 50 2e-06
U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 42 6e-04
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 37 0.017
U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF016444-12|AAB65927.2| 295|Caenorhabditis elegans Serpentine r... 31 0.85
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 30 1.5
Z77666-11|CAJ76930.1| 142|Caenorhabditis elegans Hypothetical p... 29 3.4
Z77666-10|CAB01231.1| 176|Caenorhabditis elegans Hypothetical p... 29 3.4
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 29 4.5
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 29 4.5
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 29 4.5
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF125459-9|AAD12845.2| 328|Caenorhabditis elegans Serpentine re... 28 7.9
>Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical
protein F11A3.1 protein.
Length = 544
Score = 124 bits (299), Expect = 7e-29
Identities = 61/105 (58%), Positives = 77/105 (73%)
Frame = +3
Query: 6 YIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKKPNSK 185
+IVDR+KELIK K QV P+ELE +LL H ++D V G PD GELP AFVV+ N+
Sbjct: 435 FIVDRLKELIKVKGLQVPPAELEDLLLSHPKIRDCAVIGIPDAKAGELPKAFVVRADNT- 493
Query: 186 VTEKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILRD 320
+TE+E+ DFV +VS +KQL GGV F+ EIPK+ +GKILRR LRD
Sbjct: 494 LTEQEVKDFVKPKVSPYKQLEGGVEFIEEIPKSAAGKILRRFLRD 538
>U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory
abnormality protein18 protein.
Length = 638
Score = 99.1 bits (236), Expect = 3e-21
Identities = 46/105 (43%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Frame = +3
Query: 6 YIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKK-PNS 182
Y++DRIK++IK K + PSE+E +L H + D V G D + GE+P AFVVK +
Sbjct: 480 YVLDRIKDIIKCKGTMICPSEVELVLRAHAGIDDCAVVGRQDHVTGEVPAAFVVKNAQHP 539
Query: 183 KVTEKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILR 317
+ E+ +V+ +++++K+LRGGV F++EIP++ GKILRR LR
Sbjct: 540 LLASAEVRQYVSGKIATFKELRGGVFFISEIPRSVCGKILRRNLR 584
>Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical
protein C01G6.7 protein.
Length = 540
Score = 92.7 bits (220), Expect = 2e-19
Identities = 49/116 (42%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Frame = +3
Query: 6 YIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVV-KKPNS 182
+I DRIKELIK A QVAP+ELE+++L+HD V DV V G D GE P A VV K+
Sbjct: 426 FICDRIKELIKVNAKQVAPAELESVILEHDDVADVCVFGVDDASSGERPVACVVSKRGRD 485
Query: 183 KVTEKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILRDSLTKPPASKL 350
T K ++ + +++ +K ++ + FV+EI +TG+GK+LRR ++ + +KL
Sbjct: 486 METSKAIMKHINQKLARYKHIK-EIEFVSEIMRTGTGKLLRRAMKKAFLDAKKAKL 540
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 87.0 bits (206), Expect = 1e-17
Identities = 48/105 (45%), Positives = 66/105 (62%)
Frame = +3
Query: 6 YIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKKPNSK 185
++ RIKELIK QV P E+E +LL H V+D V G PD GE P A++VKK ++
Sbjct: 436 HVTGRIKELIKVNGMQVPPVEIEDVLLLHPKVKDCAVIGIPDEQKGESPRAYIVKKDHT- 494
Query: 186 VTEKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILRD 320
+TE EL DFV +SS+K + F++ IPK SGKI R+ L++
Sbjct: 495 LTEAELSDFVHKMLSSYKWI-DTYEFIDAIPKLPSGKIQRKKLKE 538
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 87.0 bits (206), Expect = 1e-17
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Frame = +3
Query: 3 FYIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKKPNS 182
FY+VDR+K+LIK QV+P+E+E ++L V +V V G D L G+LP A++V + N+
Sbjct: 389 FYVVDRMKDLIKLNGYQVSPTEIENVILTLPKVAEVAVVGIEDELCGQLPKAYIVLEKNA 448
Query: 183 K--VTEKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRIL 314
+ K L + ++S+ KQLRGGV + E+PK+ SGKI + L
Sbjct: 449 DELLFLKHLEHTMKEKLSAVKQLRGGVSIIKEMPKSSSGKIQKNRL 494
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 87.0 bits (206), Expect = 1e-17
Identities = 47/104 (45%), Positives = 66/104 (63%)
Frame = +3
Query: 6 YIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKKPNSK 185
++ RIKELIK QV P E+E +LL H V+D V G PD GE P A++VKK ++
Sbjct: 436 HVTGRIKELIKVNGMQVPPVEIEDVLLLHPKVKDCAVIGVPDEHKGESPKAYIVKKDHT- 494
Query: 186 VTEKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILR 317
+TE EL +FV ++SS+K + F++ IPK SGKI R+ L+
Sbjct: 495 LTEAELTEFVRQKLSSYKWI-DTYEFIDSIPKLPSGKIQRKKLK 537
>Z81512-4|CAB04170.1| 550|Caenorhabditis elegans Hypothetical
protein F25C8.4 protein.
Length = 550
Score = 81.8 bits (193), Expect = 5e-16
Identities = 45/113 (39%), Positives = 64/113 (56%)
Frame = +3
Query: 6 YIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKKPNSK 185
++VD++KE+IK QV P E+E +LL H AV++ V + L GE P AFVV K
Sbjct: 417 HLVDKLKEMIKVFGYQVIPKEIETLLLTHQAVEEAAVVAINNELSGERPVAFVVLKKGFV 476
Query: 186 VTEKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILRDSLTKPPAS 344
TE +L D+V RV +K L V +PK+ G +LRR+L ++ AS
Sbjct: 477 ATEDDLKDYVNKRVIRYKHL-VRVNITQFLPKSACGTLLRRLLAEAAVMSVAS 528
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = +3
Query: 6 YIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKKPNSK 185
+I R+ +L+ ++ +E+E+ L+ H+ V + V AP + G P AFV +
Sbjct: 532 WITGRVDDLMNVSGHLLSTAEIESALVAHEKVAEAAVVAAPHDIKGSFPYAFVTLNVGER 591
Query: 186 VTEK---ELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILR 317
+ EK EL V ++ + + ++ +PKT SGK+ RRILR
Sbjct: 592 INEKLVAELKKLVREKIGA-LAVPDVIQEAPGLPKTRSGKVTRRILR 637
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = +3
Query: 6 YIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKKPNSK 185
+I R+ +L+ ++ +E+E+ L+ H+ V + V AP + G P AFV +
Sbjct: 542 WITGRVDDLMNVSGHLLSTAEIESALVAHEKVAEAAVVAAPHDIKGSFPYAFVTLNVGER 601
Query: 186 VTEK---ELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILR 317
+ EK EL V ++ + + ++ +PKT SGK+ RRILR
Sbjct: 602 INEKLVAELKKLVREKIGA-LAVPDVIQEAPGLPKTRSGKVTRRILR 647
>U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical
protein C32E8.6a protein.
Length = 461
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/102 (34%), Positives = 58/102 (56%)
Frame = +3
Query: 9 IVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKKPNSKV 188
IV R KE++K + QV P+E+E ++ + + V D V + L TA ++ P+SK
Sbjct: 368 IVGRSKEMMKIRGWQVNPNEVEDVIRKVEGVLDCAVYQNQEKL-----TAKIIGNPDSKA 422
Query: 189 TEKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRIL 314
++ V ++S+KQL V FV E+P+ SGK++R +L
Sbjct: 423 ---DIFKIVKDNLASYKQL-DDVIFVEELPRNPSGKLVRHML 460
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +3
Query: 9 IVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFV--VKKPNS 182
IV R K++I + P+E+E L +H +V+DV + G PD GE+ A+V +
Sbjct: 454 IVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEG 513
Query: 183 KVTEKELIDFVAARVSSWKQLRGGV-RFVNEIPKTGSGKILRRILRD 320
K TE+++ + +++ +K R + + E P T +GK+ + +R+
Sbjct: 514 KTTEEDIKAWCKGKIAHFKIPRYILFKKEYEFPLTVTGKVKKFEIRE 560
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +3
Query: 9 IVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFV--VKKPNS 182
IV R K++I + P+E+E L +H +V+DV + G PD GE+ A+V +
Sbjct: 473 IVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEG 532
Query: 183 KVTEKELIDFVAARVSSWKQLRGGV-RFVNEIPKTGSGKILRRILRD 320
K TE+++ + +++ +K R + + E P T +GK+ + +R+
Sbjct: 533 KTTEEDIKAWCKGKIAHFKIPRYILFKKEYEFPLTVTGKVKKFEIRE 579
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +3
Query: 9 IVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFV--VKKPNS 182
IV R K++I + P+E+E L +H +V+DV + G PD GE+ A+V +
Sbjct: 499 IVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEG 558
Query: 183 KVTEKELIDFVAARVSSWKQLRGGV-RFVNEIPKTGSGKILRRILRD 320
K TE+++ + +++ +K R + + E P T +GK+ + +R+
Sbjct: 559 KTTEEDIKAWCKGKIAHFKIPRYILFKKEYEFPLTVTGKVKKFEIRE 605
>U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical
protein F41C3.3 protein.
Length = 505
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Frame = +3
Query: 18 RIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKKPNSKVT-- 191
R K+++ V P ELE + V++ V +P P GE A VV P+ KVT
Sbjct: 396 RSKDMVITGGLNVYPKELEDFIDTLPFVKESAVIASPHPDFGEAVVAIVV--PSEKVTDE 453
Query: 192 ---EKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILRDS 323
EK+LI + +V+++K + V ++++P+ K+ + +LRD+
Sbjct: 454 KEFEKKLIGIMKKKVANYK-VPKRVIVLDDLPRNHITKVQKNVLRDT 499
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Frame = +3
Query: 18 RIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKK---PNSKV 188
R K++I + P E+E + + V++ V AP P GE A VV K + +
Sbjct: 408 RSKDMIISGGENIYPKEIEDAIDSIEFVKESAVIAAPHPDFGEAVVAVVVPKNMVEDEQK 467
Query: 189 TEKELIDFVAARVSSWKQLRGGVRFVNEIPKTGSGKILRRILRDSLTK 332
E++LI+ + +++ +K + V + E+P+ K+ + ILR S K
Sbjct: 468 FEEDLIEMLRKKLAKYK-VPKKVILLEELPRNHITKVRKDILRASYNK 514
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +3
Query: 9 IVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAPDPLVGELPTAFVVKK--PNS 182
IV R +++I V P+E+E L + D V D V G PD GE A+V +
Sbjct: 491 IVGRTRDMIVKGGENVYPTEIEQFLHKLDYVADAHVVGVPDDRYGENICAWVRLRVEDEG 550
Query: 183 KVTEKELIDFVAARVSSWKQLRGG-VRFVNEIPKTGSGKI 299
K+T + + ++ +K + ++ +E P T SGK+
Sbjct: 551 KITAEHIKKACKRGMAHYKVPKYVLIKKESEFPLTISGKV 590
>U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical
protein D1009.1a protein.
Length = 655
Score = 33.5 bits (73), Expect = 0.16
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = +3
Query: 6 YIVDRIKELIKYKAGQVAPSELEAILLQHDAVQDVGVAGAP-DPLVGELPTAFVVKKPNS 182
Y VDR + ++K V+ +E+E IL V+D V G + G A +V K +
Sbjct: 507 YFVDRCGDTFRWKGENVSTTEVEGILQPVMDVEDATVYGVTVGKMEGRAGMAGIVVKDGT 566
Query: 183 KVTEKELIDFVAARVSSWKQ--LRGGVRFVNEIPKTGSGKILRRILR 317
V EK + D + + + +R E+ +TG+ K+ + L+
Sbjct: 567 DV-EKFIADITSRLTENLASYAIPVFIRLCKEVDRTGTFKLKKTDLQ 612
>AF016444-12|AAB65927.2| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 6 protein.
Length = 295
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 420 LNLIWIIKLSKIYSNFGQVVQKIKVCLLEVWLMNRAVCVAIFFRCRSLVSRLRI*LH 250
L+L + +S I N G + + C ++W +NR+V A+ F ++S + H
Sbjct: 149 LHLFCTLHISAIPRNCGVLRCAVDACFFDIWTVNRSVVFALNFAFSGVLSTKLLIFH 205
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 22 LKS*SNTRLDRLHHQSLKQYYCSMTLFKMLESQGHQTLL 138
+K N LDR+ HQSL Y + ++M+ Q +TL+
Sbjct: 1203 IKMAENMPLDRIDHQSLSNMYLLIRGYRMIGVQSGETLI 1241
>Z77666-11|CAJ76930.1| 142|Caenorhabditis elegans Hypothetical
protein K08E7.8b protein.
Length = 142
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 96 AVQDVGVAGAPDPLVGELPTAFVVKKPNSKVTEKELIDFVAARVSSWKQLRGGVRFVNEI 275
++QD G P V + PTA ++ N++++E + V++W L+G N+I
Sbjct: 20 SIQDNGFKKFPKKFVIKFPTATILNMANNEISE------IPEEVATWTSLKGLNAAKNKI 73
Query: 276 PK 281
K
Sbjct: 74 SK 75
>Z77666-10|CAB01231.1| 176|Caenorhabditis elegans Hypothetical
protein K08E7.8a protein.
Length = 176
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 96 AVQDVGVAGAPDPLVGELPTAFVVKKPNSKVTEKELIDFVAARVSSWKQLRGGVRFVNEI 275
++QD G P V + PTA ++ N++++E + V++W L+G N+I
Sbjct: 54 SIQDNGFKKFPKKFVIKFPTATILNMANNEISE------IPEEVATWTSLKGLNAAKNKI 107
Query: 276 PK 281
K
Sbjct: 108 SK 109
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying
defective protein 19,isoform a protein.
Length = 1783
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -3
Query: 601 FKVMFNRIIWHEFYSYAIKFCYLISN 524
F+V N ++ H +++ A+ FC L+S+
Sbjct: 787 FRVFCNMVVNHSYFTNAVLFCILVSS 812
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying
defective protein 19,isoform b protein.
Length = 1877
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -3
Query: 601 FKVMFNRIIWHEFYSYAIKFCYLISN 524
F+V N ++ H +++ A+ FC L+S+
Sbjct: 787 FRVFCNMVVNHSYFTNAVLFCILVSS 812
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -3
Query: 601 FKVMFNRIIWHEFYSYAIKFCYLISN 524
F+V N ++ H +++ A+ FC L+S+
Sbjct: 787 FRVFCNMVVNHSYFTNAVLFCILVSS 812
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -3
Query: 220 AATKSINSFSVTLEFGFLTTNAVGNSPTRGSGAPATPTS 104
++T+S N+ + T+E G TTN T S PATPT+
Sbjct: 454 SSTQSSNAQTSTIENGSTTTNFTSAPST--SSTPATPTT 490
>AF125459-9|AAD12845.2| 328|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 22 protein.
Length = 328
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -1
Query: 447 ININSNTYPLNLIWIIKLSKIYSN---FG-QVVQKIKVCLLEVWLMNRAVCV 304
I I + +PL +IW I LS++Y+N +G V K + V L+N C+
Sbjct: 159 ILIIQHLFPLGVIWNILLSRVYTNPSGYGFSVNYKAAIPWANVSLLNLFHCI 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,663,664
Number of Sequences: 27780
Number of extensions: 357528
Number of successful extensions: 1049
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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