Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20a18
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 176 9e-45
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 137 7e-33
AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa hy... 78 4e-15
Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 66 2e-11
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 62 4e-10
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 61 7e-10
Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical p... 60 2e-09
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 59 2e-09
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 59 2e-09
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 59 2e-09
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 57 9e-09
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 57 9e-09
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 57 1e-08
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 27 8.1
U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead trans... 27 8.1
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 176 bits (429), Expect = 9e-45
Identities = 83/151 (54%), Positives = 109/151 (72%)
Frame = +3
Query: 162 VLNKCKVVSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVEL 341
++ K+ + +Q + +S+ + E IK+E VG K+NV LI+LNRPKALNALC L EL
Sbjct: 8 LVRNAKLCANVNQMQVAAFSSKAPEMIKIEKVGEKQNVALIKLNRPKALNALCAQLMTEL 67
Query: 342 GKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKP 521
A+ D D ++ AI+ITG+E+AFAAGADIKEM NN +++ FL W +S+ KP
Sbjct: 68 ADALEVLDTDKSVGAIVITGSERAFAAGADIKEMTNNEFATTFSGSFLSNWTAVSDVKKP 127
Query: 522 IIAAVNGFALGGGCELAMLCDIIYAGEKAKF 614
+IAAVNGFALGGG ELAM+CDIIYAGEKA+F
Sbjct: 128 VIAAVNGFALGGGNELAMMCDIIYAGEKARF 158
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 137 bits (331), Expect = 7e-33
Identities = 64/125 (51%), Positives = 87/125 (69%)
Frame = +3
Query: 240 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFA 419
I + G+ +NV LI LNRP ALNALC+ L +EL + + + D + I++TG+EKAFA
Sbjct: 2 ITLSRTGAAENVALITLNRPSALNALCRELMLELSENLLKVEKDQSYHVIVLTGSEKAFA 61
Query: 420 AGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAG 599
AGADIKEM ++ + + W+ +S+ KP+IAAVNGFALGGG ELA++CDI+YAG
Sbjct: 62 AGADIKEMAKLEFADVFENDYFTNWDTLSHITKPVIAAVNGFALGGGTELALMCDIVYAG 121
Query: 600 EKAKF 614
E A F
Sbjct: 122 ENAIF 126
>AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa
hydratase protein 5 protein.
Length = 284
Score = 78.2 bits (184), Expect = 4e-15
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = +3
Query: 252 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGN-EKAFAAGA 428
+ G + + ++ +NRP N+L + + + +++ D +I+ + F +GA
Sbjct: 35 LTGKDEGITILNMNRPAKKNSLGRVFMDQFREVLDELKYDPKTRVVILNSKCDNVFCSGA 94
Query: 429 DIKEMQNNTYSSNTK--QGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGE 602
D+KE + + T+ G + D+ +P+IAA++GFALGGG ELA+ CDI A +
Sbjct: 95 DLKERKTMSQQEATRFVNGLRDSFTDVERLPQPVIAAIDGFALGGGLELALACDIRVASQ 154
Query: 603 KAK 611
KAK
Sbjct: 155 KAK 157
>Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical
protein B0272.4 protein.
Length = 255
Score = 68.9 bits (161), Expect = 3e-12
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +3
Query: 264 KKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNE-KAFAAGADIKE 440
K NV + LNRPK NAL + +F++L ND D +IA ++ TG + K + AG+D
Sbjct: 11 KNNVLWVTLNRPKKFNALTRQMFLDLCTVFNDAADDDDIAFVVFTGGKGKYYCAGSDFSP 70
Query: 441 MQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 614
+ +T + + G+ + + KPIIA VNG A+G + + D + A + A F
Sbjct: 71 AELSTLTDIQEHGYKLFVDILIAFPKPIIALVNGHAVGVSVTMLGVMDAVIAIDTATF 128
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 66.1 bits (154), Expect = 2e-11
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Frame = +3
Query: 198 QASIKFYSTA-SYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADS 374
Q S + ST+ + ++ ++ V + V ++LNRP LN ++ E KA++ D
Sbjct: 10 QISSRALSTSPALKSSEISVKEERPYVYNVKLNRPAKLNTFTMDMWREFKKAIDSLADDP 69
Query: 375 NIAAIIITGNEKAFAAGADI--------KEMQNNTYSSNTK----QGFLREWED----IS 506
+III+G KAF AG DI + +Q++T K + F+ E +D +
Sbjct: 70 KCRSIIISGEGKAFCAGIDIAHGLSDILRIIQDDTIEVGRKGRLVRKFIGEIQDCYTALE 129
Query: 507 NCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 614
C KPIIA+++ LG G +L CDI A + A F
Sbjct: 130 RCPKPIIASIHSHCLGAGIDLITACDIRVASQDAIF 165
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Frame = +3
Query: 204 SIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKAL-NALCKPLFVELGKAVNDFDADSNI 380
S + +S +++ V + +V +++++ P N L K LF E+ + ++ +D ++
Sbjct: 18 SFRLFSQSAFAVHSTHRVEKQGDVAVMKIDLPNTTENVLNKALFAEMNETLDRLQSDQSV 77
Query: 381 AAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCGKPIIAAVNGF 545
AI++ +G +F AGADI+ + ++ LRE + I KPI+AA+ G
Sbjct: 78 KAIVVMSGKPNSFVAGADIQMFKAEKTAAGVSN-LLREGQKQLLTIELSQKPIVAAIMGS 136
Query: 546 ALGGGCELAMLC 581
+GGG E+A+ C
Sbjct: 137 CMGGGLEIALAC 148
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 60.9 bits (141), Expect = 7e-10
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Frame = +3
Query: 222 TASYENIKVEVVGSKKNVG----LIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAI 389
++ Y ++K+ V KNVG + LNRP NAL ++ E+G D D +
Sbjct: 2 SSKYNSLKLVKV---KNVGDFVYKVSLNRPSKFNALNMVIWKEIGDCFQLIDEDPECRVV 58
Query: 390 IITGNEKAFAAGADIKE---MQNNTYSSNTKQG--------FL-REWEDISNCGKPIIAA 533
I+ G K F +G D+ E + + ++G F+ +++ I C KP+I A
Sbjct: 59 ILQGEGKHFCSGLDLSEVTFLNGEEADDSARRGRSILRTIKFMQKQFTYIDECSKPVILA 118
Query: 534 VNGFALGGGCELAMLCDIIYAGEKA 608
++G+ LG ++A CD+ A + A
Sbjct: 119 MHGYCLGAALDIATACDVRVATKDA 143
>Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical
protein F38H4.8 protein.
Length = 283
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = +3
Query: 198 QASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSN 377
++S++ +ST+ +E + N + + K +N L + EL + D
Sbjct: 3 KSSLRAFSTSKAARTLLERELYQGNSVVRFILNDKKVNTLSLAMINELFAELKAIDKIEK 62
Query: 378 IAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLR---EWEDISNCGKPIIAAVNGFA 548
+ ++II N K+F+AG ++KE+ + S + F I N P+IA VNG A
Sbjct: 63 VRSVIIAHNGKSFSAGHELKELTTESGSDKHNEIFNTCGDMMNFIRNMKVPVIAEVNGTA 122
Query: 549 LGGGCELAMLCDIIYAGEKAKF 614
G +L CD++ AG+ +KF
Sbjct: 123 AAAGLQLVASCDVVVAGKSSKF 144
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Frame = +3
Query: 204 SIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKAL-NALCKPLFVELGKAVNDFDADSNI 380
S + +S ++ V + +V +++++ P N L K LF E+ ++ +D +I
Sbjct: 44 SFRLFSQSAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESI 103
Query: 381 AAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCGKPIIAAVNGF 545
+I++ +G +F AGADI+ ++ ++ T+ RE ++ I KP++AA+ G
Sbjct: 104 KSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LSREGQEQFFRIEKSQKPVVAAIMGS 162
Query: 546 ALGGGCELAMLC 581
+GGG ELA+ C
Sbjct: 163 CMGGGLELALAC 174
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Frame = +3
Query: 204 SIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKAL-NALCKPLFVELGKAVNDFDADSNI 380
S + +S ++ V + +V +++++ P N L K LF E+ ++ +D +I
Sbjct: 18 SFRLFSQSAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESI 77
Query: 381 AAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCGKPIIAAVNGF 545
+I++ +G +F AGADI+ ++ ++ T+ RE ++ I KP++AA+ G
Sbjct: 78 KSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LSREGQEQFFRIEKSQKPVVAAIMGS 136
Query: 546 ALGGGCELAMLC 581
+GGG ELA+ C
Sbjct: 137 CMGGGLELALAC 148
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Frame = +3
Query: 204 SIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKAL-NALCKPLFVELGKAVNDFDADSNI 380
S + +S ++ V + +V +++++ P N L K LF E+ ++ +D +I
Sbjct: 44 SFRLFSQSAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESI 103
Query: 381 AAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCGKPIIAAVNGF 545
+I++ +G +F AGADI+ ++ ++ T+ RE ++ I KP++AA+ G
Sbjct: 104 KSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LSREGQEQFFRIEKSQKPVVAAIMGS 162
Query: 546 ALGGGCELAMLC 581
+GGG ELA+ C
Sbjct: 163 CMGGGLELALAC 174
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 57.2 bits (132), Expect = 9e-09
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Frame = +3
Query: 219 STASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 398
S A+ I V+ GSKK ++ LNRPKALNAL + E + +++ S++ +I+
Sbjct: 6 SAAAKSEILVDTHGSKK---VVTLNRPKALNALNLEMVREFYPKLQAWNSSSDVDLVILK 62
Query: 399 GN-EKAFAAGADI-------KEMQNNTYSSNTKQGFLREW---EDISNCGKPIIAAVNGF 545
G+ +KAF AG D+ K+ ++ + K F E+ I K + ++G
Sbjct: 63 GSGDKAFCAGGDVLAVVRSFKDSESGKECTMHKDFFREEYILNHLIGTLNKQYVCLIDGI 122
Query: 546 ALGGGCELAM 575
+GGGC L++
Sbjct: 123 VMGGGCGLSV 132
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 57.2 bits (132), Expect = 9e-09
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Frame = +3
Query: 219 STASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 398
S A+ I V+ GSKK ++ LNRPKALNAL + E + +++ S++ +I+
Sbjct: 29 SAAAKSEILVDTHGSKK---VVTLNRPKALNALNLEMVREFYPKLQAWNSSSDVDLVILK 85
Query: 399 GN-EKAFAAGADI-------KEMQNNTYSSNTKQGFLREW---EDISNCGKPIIAAVNGF 545
G+ +KAF AG D+ K+ ++ + K F E+ I K + ++G
Sbjct: 86 GSGDKAFCAGGDVLAVVRSFKDSESGKECTMHKDFFREEYILNHLIGTLNKQYVCLIDGI 145
Query: 546 ALGGGCELAM 575
+GGGC L++
Sbjct: 146 VMGGGCGLSV 155
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 56.8 bits (131), Expect = 1e-08
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Frame = +3
Query: 273 VGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQNN 452
V LI +NR N + ++L A F+ DS + ++ G F AG D++ +
Sbjct: 15 VFLIGINRANKKNCVNHATALQLIDAFEKFNEDSTMKTAVLYGEGGTFCAGYDLESVSKA 74
Query: 453 TYSSNTKQGFLREWE----DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 614
+ + F ++ I KP+IAA+ GFA+ GG EL+++ D+ + AKF
Sbjct: 75 EHQE-VSEDFCDKYRYMGPSIMKIKKPLIAAIEGFAVAGGLELSLMADLRVSSPSAKF 131
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 52.8 bits (121), Expect = 2e-07
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Frame = +3
Query: 219 STASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 398
S EN+ V + V I LNRPK NAL ++ + KA+ + D + + +IT
Sbjct: 119 SIEGLENVDGLSVTREGKVFKIALNRPKKFNALTLEMYQGIQKALEVSNNDKSTSITVIT 178
Query: 399 GNEKAFAAGADI---KEMQNNTYS-----SNTKQGFLREWED-ISNCGKPIIAAVNGFAL 551
N + AG D+ K T +NT + ++++ + N KP+IA +NG A+
Sbjct: 179 ANGSYYCAGNDLTNFKAAAGGTKEQIADMANTAKVIMKDYVNAYINHEKPLIALINGPAV 238
Query: 552 GGGCELAMLCDIIYAGEKAKF 614
G + + D + A +KA F
Sbjct: 239 GIAVTVLGMFDYVIATDKASF 259
>U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical
protein C32E8.9 protein.
Length = 268
Score = 41.9 bits (94), Expect = 3e-04
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Frame = +3
Query: 288 LNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD---IKEMQNNTY 458
L+RP+ N L + + G+ F D N A I+++G K+F +GAD IK++ +
Sbjct: 40 LDRPEKNNCLSGEMMKQFGEHTELFSDDQN-AIIVVSGVGKSFCSGADLGLIKDISDQKL 98
Query: 459 SSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKF 614
+ + + IA ++G ALGG E+ D I ++G K F
Sbjct: 99 GVQMFEYMSSILSLLHSSPAISIAKIHGHALGGATEICSSTDIRIAHSGSKIAF 152
>Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical
protein ZK856.7 protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 363 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDIS--NCGKPI 524
D D + I+ N K + +K++Q NT+ + L++WE + + GKP+
Sbjct: 26 DTDKKFSGQIVASNGKKSERWSYLKKLQKNTFQQKADECGLKDWEITTWDDAGKPV 81
>Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 240 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAF 416
IK++ GS N G N L LC P G+ +DF D N + I+ +KAF
Sbjct: 504 IKLQTTGSTVN-GCGSFNSDMDL-CLCFPTNGYKGQVCDDFHCDRNYSTKILRKIDKAF 560
>Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 240 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAF 416
IK++ GS N G N L LC P G+ +DF D N + I+ +KAF
Sbjct: 501 IKLQTTGSTVN-GCGSFNSDMDL-CLCFPTNGYKGQVCDDFHCDRNYSTKILRKIDKAF 557
>Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 240 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAF 416
IK++ GS N G N L LC P G+ +DF D N + I+ +KAF
Sbjct: 504 IKLQTTGSTVN-GCGSFNSDMDL-CLCFPTNGYKGQVCDDFHCDRNYSTKILRKIDKAF 560
>Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 240 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAF 416
IK++ GS N G N L LC P G+ +DF D N + I+ +KAF
Sbjct: 501 IKLQTTGSTVN-GCGSFNSDMDL-CLCFPTNGYKGQVCDDFHCDRNYSTKILRKIDKAF 557
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = +3
Query: 156 KNVLNKCKVVSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFV 335
+ +++ KV+ A ASI + + N+ +E + KN I +AL + +
Sbjct: 28 RKIMDGEKVIIAGRVASIHLKNFMCHANLLIEFDVANKNCFYIGGPNGSGKSALFAAMNM 87
Query: 336 ELGKAVNDFDADSNIAAIIITGNEKA 413
LG +D + +N+ A I G +A
Sbjct: 88 GLGGRGSDSERGNNVQAYIKDGTTQA 113
>U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead
transcription factor familyprotein 5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 449 VLHLLNISTSRKRLL-VTSDDDGSNVAVGVKIIDCLPEFDKQWF 321
+ + N+ SRKR L VT D GS + + K+I P +K WF
Sbjct: 116 ITEMTNVHKSRKRKLMVTEDQWGSQITI-PKVIQNRPLIEK-WF 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,609,397
Number of Sequences: 27780
Number of extensions: 309751
Number of successful extensions: 1023
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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