Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20a01
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 50 3e-07
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 34 0.024
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 31 0.13
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 31 0.13
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 30 0.40
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 29 0.53
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 29 0.70
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 29 0.70
SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces p... 29 0.92
SPBC4B4.04 |||translation initiation factor eIF2A |Schizosacchar... 26 1.0
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 28 1.2
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 28 1.6
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 27 2.1
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 27 2.1
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 25 8.6
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 25 8.6
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 50.4 bits (115), Expect = 3e-07
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Frame = +3
Query: 459 QMAVRELMEDTKKKVKIETSAITVPLP------AKPVTDGEKESTLDDYDSVPIQDFGMA 620
Q+ + +L +D K IT + K + + + S + DY +P+++FG A
Sbjct: 140 QLVLNDLNDDVKSANSANLQPITTNVVNEKDAYRKDIDELPEPSNMKDYSEIPVEEFGAA 199
Query: 621 MLRGMGWTPNKDLPKYKQPQLRPKGLGLGADXVVSD 728
MLRGMGW RP LG+GA V S+
Sbjct: 200 MLRGMGWNGQLSSKDAFDVNQRPTFLGMGAKPVDSE 235
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 33.9 bits (74), Expect = 0.024
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Frame = +3
Query: 177 ISFGFMKTKKAEKPVVDEKKDYIECVEEKS-IKVVGAEEIKDDTPLIIPMKPNTLITTER 353
I G KT+ PV DEK + + E S V+ D P++ +PN L +
Sbjct: 675 IDRGVTKTRDVSSPVSDEKSENVNHEEANSGHTVMNVHSSLDPQPIV---QPNELESGSY 731
Query: 354 LKQI-------AQKV---ESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKV 503
LK + ++KV E ++ P+ ++S + +TVE ET +++ +E + +
Sbjct: 732 LKDLPDRNVGNSEKVTFQEDDINSPK-LQSKNNQTVEAVNTETSDKLQEKEANHELENIE 790
Query: 504 KIE 512
KIE
Sbjct: 791 KIE 793
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 31.5 bits (68), Expect = 0.13
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -3
Query: 406 TTSGSSKALSTFWAICFNLSVVMSVLGFIGI 314
T S K + F +ICF++SVV+S++G +G+
Sbjct: 177 TFSPPPKRANYFLSICFSVSVVVSLIGLLGV 207
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 31.5 bits (68), Expect = 0.13
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 225 DEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKP----NTLITTERLKQIAQKVESALD 392
D + D ++ EEK V + K+D P + P P ++ + E L Q+ + ++S D
Sbjct: 587 DAEGDIVQNEEEKESVEVEEGKHKNDLPKVSPKPPTEGVDSEVNGESLVQVNKVLKSEDD 646
Query: 393 EPEVVKSDSPKTVEIPEN-ETLEQ 461
D V+ PEN E L+Q
Sbjct: 647 NTSEASKDPSSHVKSPENIEKLKQ 670
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 254 YTFYIVLFFVYDWFFCFFRFHETKRYFFALHFRSYSS 144
+TF I FF Y +FF FF F +R+ A+ Y S
Sbjct: 67 HTFTIEAFF-YWFFFFFFFFSHCRRFHIAIFIHPYDS 102
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 29.5 bits (63), Expect = 0.53
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 312 IIPMKPNTLITTERLKQIAQKVESA--LDEPEVVKSDSPKTVEI 437
I+ KP IT + +Q+A K+ESA P+V + DS V I
Sbjct: 364 IVTKKPEPCITVKEEEQLAPKIESADLSITPQVTEHDSKPPVRI 407
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 29.1 bits (62), Expect = 0.70
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 189 FMKTKKAEKPVVDE-----KKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTER 353
F ++K KPV E KKD +E VEE + AE I+ DT + +KP + ++
Sbjct: 33 FSQSKPIPKPVAKETTVLTKKD-VE-VEEANGVEEAAETIESDTKEVQNIKPKSKKKKKK 90
Query: 354 LKQIAQKVESALDEPEVVKSDSPK 425
L + +E E + + D K
Sbjct: 91 LNDSSDDIEGKYFEELLAEEDEEK 114
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 29.1 bits (62), Expect = 0.70
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 372 KVESALDEPEVVKSDSP--KTVEIPENETLEQMAVRELMEDTKKKVKIETSAITVPLPAK 545
K E+A +V K ++ K+ E +T + + E+TKK VK+ET + P P
Sbjct: 198 KRENAKVPKDVSKKEAKTTKSKEKATKKTSSSVPKQSTGENTKKAVKLETPLTSTP-PIP 256
Query: 546 PVTDGE-KESTLDDYDSVP 599
P+++ + +T++++ S P
Sbjct: 257 PLSEPKHSPATVNEHISPP 275
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 474 ELMEDTKKKVKIETSAITVPLPAKPVTDGEKESTLDDYDSVPIQD 608
E + TKKK K S T P PA +++ DD + +D
Sbjct: 133 ERSKKTKKKKKTSLSNATHPAPAVSAVVASADASFDDSRDIESED 177
>SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 28.7 bits (61), Expect = 0.92
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 198 TKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQK 374
+K +K E+++Y+E V+EKS+K E D+ ++P + T I+ R + + K
Sbjct: 163 SKATKKVKQKEEEEYVEEVDEKSLK---NESSSDEFEPVVPEQLETPISKRRRSRSSAK 218
>SPBC4B4.04 |||translation initiation factor eIF2A
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 576
Score = 25.8 bits (54), Expect(2) = 1.0
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +3
Query: 303 TPLIIPMKPNTLITTERLKQIAQKVESALDEPEV------VKSDSPKTVEIPENETLEQM 464
TP+I K N T +KQ+AQ DE ++ +++ + NE LE
Sbjct: 493 TPVIDGNKKNNKKTKPAVKQVAQPTAEVSDEKKIRSLCKKLRAIDDLKSRLNNNEKLEAT 552
Query: 465 AVRELMEDTKKKVKIETSAI 524
V+++ +++ KV E A+
Sbjct: 553 QVKKI--ESEGKVLAELKAL 570
Score = 21.0 bits (42), Expect(2) = 1.0
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +3
Query: 615 MAMLRGMGWTPN 650
+A L+ +GWTP+
Sbjct: 564 LAELKALGWTPD 575
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 28.3 bits (60), Expect = 1.2
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +3
Query: 309 LIIPMKPNTLITTERLKQIAQKVESALDEPEV-VKSDSPKTVEIPENETLEQMAVRELME 485
L IP P + TE +Q +E LDEPE+ V SD+P +++ E+ ++ + + ++
Sbjct: 209 LPIPSSPPAALETEENVD-SQPME--LDEPELPVGSDAP-IIDVEESIAMKPLMSHDQVD 264
Query: 486 DTKKKVKIETSAITVPLPAKPVTDGEKESTLDDYDSV 596
DT K S P P+T E + + +
Sbjct: 265 DTASLSKATIS----QQPLSPMTPLSSELDVSAFSEI 297
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.9 bits (59), Expect = 1.6
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +3
Query: 345 TERLKQIAQKVESALDEPEVVKSDSPKTVEIPE-NETLEQMAVRELMEDTKKKVKIE-TS 518
TE+L I ++ LDE + +S +++P+ + + + E + KVK E T+
Sbjct: 158 TEKLNTINLDIDKILDELDTTRSQLHSIIKLPDRSSSFTLQCINESVRPQSTKVKEEATT 217
Query: 519 AITVPLPAKPVTDGEKESTLDDYDSVPIQDFGM 617
+ K V+ E+ + L + Q G+
Sbjct: 218 SSKGKDEEKKVSTVEQRTQLQQLSRLQDQQNGL 250
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 342 TTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
T +R K + ++V ++ E ++ VEI E+LE + E +DT +E
Sbjct: 120 TIDRKKSLERRVRE--EQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLE 174
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 480 MEDTKKKVKIETSAITVPLPAKPV--TDGEKESTLDDYDSV 596
+E KK + TSA + LP+ PV D + ++ LD ++ V
Sbjct: 374 LESNKKPYRSPTSAADMKLPSVPVAAVDNKSKTHLDTFEKV 414
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.4 bits (53), Expect = 8.6
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 291 IKDDTPLIIPMKPNTLITT--ERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETL-EQ 461
+K D+PLIIP N+ T E+L ++ + S D ++ + + K + ++E L E
Sbjct: 269 VKFDSPLIIPETVNSAGHTVREQLFEVKEFTRSIKDLKDLYEKANSKDIYDKDSEILGEA 328
Query: 462 MAVRELME 485
A+ L +
Sbjct: 329 KAILRLAD 336
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 242 IVLFFVYDWFFCFFRFH 192
++LFF+ FFC R+H
Sbjct: 198 MLLFFIISTFFCLSRYH 214
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,657,720
Number of Sequences: 5004
Number of extensions: 50621
Number of successful extensions: 196
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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