Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20a01
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0392 - 8070342-8071628 36 0.026
02_01_0382 - 2772378-2773544 31 0.73
04_04_0750 + 27763841-27763972,27764311-27764485,27764908-277649... 31 1.3
03_01_0643 - 4708245-4708355,4708456-4708800,4709124-4709700,470... 31 1.3
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 30 1.7
02_02_0074 + 6567362-6567550,6567685-6567753,6567869-6567970,656... 30 2.2
01_03_0200 + 13744735-13745037,13745071-13745610,13745704-137458... 30 2.2
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 29 2.9
02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659,376... 29 3.9
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 29 5.1
12_02_1281 + 27523411-27523561,27523725-27523810,27524653-275247... 28 6.8
08_02_0154 - 13324384-13325351,13326306-13326502,13326695-133272... 28 6.8
08_02_0151 - 13287964-13288661,13289616-13289812,13290005-132905... 28 6.8
08_02_0146 - 13195691-13196658,13197613-13197809,13198002-131984... 28 6.8
03_02_0837 - 11640169-11640447 28 6.8
03_01_0586 - 4339090-4339194,4340186-4340366,4340531-4340601,434... 28 6.8
10_08_0003 - 13992276-13992311,13992461-13992598,13992682-139928... 28 9.0
05_02_0065 - 6276439-6276462,6276716-6276781,6277035-6277100,627... 28 9.0
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 28 9.0
01_04_0063 - 15574855-15575143,15575398-15575602,15575746-155759... 28 9.0
>03_02_0392 - 8070342-8071628
Length = 428
Score = 36.3 bits (80), Expect = 0.026
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +3
Query: 576 LDDYDSVPIQDFGMAMLRGMGWTP-------NKDLPKYKQPQLRPKGLGLGADXVVSDKK 734
LD++ VP++ FG A+L G GW+ NK K + R GLG + +D K
Sbjct: 174 LDEFRDVPVEGFGAALLAGYGWSEGKGIGRNNKGDTKVVEYDRRAGTQGLGYNPSEADPK 233
Query: 735 KT 740
KT
Sbjct: 234 KT 235
>02_01_0382 - 2772378-2773544
Length = 388
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 324 KPNTLITTERLKQIAQKVESALDEPEVVKSDSPK 425
+PNT+ + E K+IA + ++E EVV D PK
Sbjct: 207 EPNTIKSPEPEKEIATTATTIIEEEEVVDDDEPK 240
>04_04_0750 +
27763841-27763972,27764311-27764485,27764908-27764998,
27764999-27765133,27765683-27765742,27765876-27765951,
27766037-27766174,27766509-27767373,27767763-27767865,
27768101-27768176,27768329-27768393,27768463-27768493,
27768618-27768725
Length = 684
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = +3
Query: 222 VDEKKDYIECVEEKSIKVVGAEEI-KDDTPLIIPMKPNTLIT------TERLKQIAQKVE 380
+DE D EE++ + VG EEI DD P + + + L + T+R I QKVE
Sbjct: 213 LDELSDNEAYPEEENAEAVGTEEIGDDDMPDLESLNYDDLDSVSKLQKTQRYNDIMQKVE 272
Query: 381 SALDEPEVVKSDSPKTVEIPENETL 455
+AL + + E PE + +
Sbjct: 273 NALQKGTDFSNQRSILEEDPEYQLI 297
>03_01_0643 -
4708245-4708355,4708456-4708800,4709124-4709700,
4709780-4710462,4710618-4710980,4712199-4712530,
4712856-4713048,4713748-4713790,4713964-4714052,
4714186-4714301,4714816-4714935,4715538-4715577
Length = 1003
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/88 (25%), Positives = 44/88 (50%)
Frame = +3
Query: 264 SIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPE 443
SIK V ++ +TP IP T T + +Q + +E A++ P ++K+ S +I +
Sbjct: 295 SIKDVDGDDTDGETPWQIPNASGTFATADSFQQNDKTLEEAINYP-LLKTQSSSLSDIIK 353
Query: 444 NETLEQMAVRELMEDTKKKVKIETSAIT 527
+ + + M +K+ +++ S IT
Sbjct: 354 DSFKKNDSFTRWM--SKELAEVDDSQIT 379
>04_04_1183 - 31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 201 KKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVE 380
++A+ V+DE ++ + I+ EE K T LII + NT+I +RL ++
Sbjct: 1420 RRAKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTVIDCDRLLILSAGKV 1479
Query: 381 SALDEPEVVKSD 416
D PE + S+
Sbjct: 1480 LEFDSPENLLSN 1491
>02_02_0074 +
6567362-6567550,6567685-6567753,6567869-6567970,
6568386-6568627,6569057-6569195,6569298-6569333,
6569838-6569972,6570315-6570547,6571204-6571298,
6571331-6571374,6571808-6571888
Length = 454
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Frame = +3
Query: 282 AEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDE----PEVV---KSDSPKTVEIP 440
+E D+TP+++ + + ++ R + A + AL E P V+ SDS K+
Sbjct: 80 SEYTSDETPMVVYVNTHAILDARRARARAAAAQGALPESSQGPRVIIVGPSDSGKSTLC- 138
Query: 441 ENETLEQMAVRELMEDTKKKVKIETSAITVP--LPAKPVTDGEKESTLDDYDSVPIQ 605
+ L A ++ + T + I +IT+P + A P+ E +D D +P++
Sbjct: 139 --KMLLSWAAKQGWKPTYVDLDIGQGSITIPGCISATPI-----EKPIDIVDGIPLE 188
>01_03_0200 + 13744735-13745037,13745071-13745610,13745704-13745862,
13748992-13749123,13749282-13749472,13749541-13749792,
13750248-13750323,13750411-13750602,13750688-13750689,
13753230-13753287,13753736-13754941
Length = 1036
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -3
Query: 457 SKVSFSGISTVFGLSDFTTSGSSKALSTFWAICFNLSVVMS 335
SKV+F+G TV +S TTS + ST W + F S ++S
Sbjct: 954 SKVAFTGFLTV-AISARTTSRGPLSTSTQWFLIFAASAIVS 993
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +3
Query: 219 VVDEKKDYIECVEEKSIK---VVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESAL 389
VVD K Y E +EE+S++ VV E + + P +I +E +K A ++E L
Sbjct: 92 VVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEAMILSEFIKTDAYRMEVFL 151
Query: 390 DEPEVVKSDSPKTVEIPENETLEQMAVRELM 482
D E V +I ++ + ++ +R +
Sbjct: 152 DVVESVNILVNSNGQIVRSDVIGELKMRTFL 182
>02_01_0521 +
3768072-3768239,3768280-3768337,3769197-3769659,
3769736-3769990,3770763-3770934,3772260-3772910,
3773659-3774045,3774123-3774155,3774239-3774307,
3774388-3774463,3775135-3775223,3775442-3775615,
3775693-3775821
Length = 907
Score = 29.1 bits (62), Expect = 3.9
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +3
Query: 360 QIAQKVESALDEPEVVKSDSPKTVEI-PENETLEQMAVRELMEDTKKKVKIETSAITVPL 536
Q VE + P ++ SD + I P NE L +A K+V + TS
Sbjct: 313 QYGDDVEVIMKHPYILASDKERVAAIEPMNERLYDLA-------ESKRVDLNTSL----- 360
Query: 537 PAKPVTDGEKESTLDD-YDSVPIQDFGMAMLRGMGWTPNKDLPKYKQPQLR 686
+ D +S L + +D VP +DF +L + ++D+P+Y+ +R
Sbjct: 361 -KQNFRDWVWQSMLKERHDYVPPEDFITRVLPPEAFADSRDIPEYEVAFIR 410
>04_04_0962 + 29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +3
Query: 186 GFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQI 365
G + +K++ V+DE ++ ++ I+ + +E KD T L I + NT+I ++ + +
Sbjct: 1028 GRILLRKSKILVLDEATASVDSATDRIIQEIIRQEFKDCTVLAIAHRMNTVIDSDLILVL 1087
Query: 366 AQKVESALDEP 398
+ D P
Sbjct: 1088 GEGSILEYDTP 1098
>12_02_1281 +
27523411-27523561,27523725-27523810,27524653-27524718,
27524801-27524971,27525365-27525535,27525620-27525739,
27525868-27526014,27526193-27526264,27526359-27526832,
27526914-27527086,27527194-27527230
Length = 555
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +3
Query: 324 KPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEI--PENETLEQMAVRELMEDTKK 497
K L+ ER QIA S +D+ + + K +EI EN+ L++M R+ + + +K
Sbjct: 176 KEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEENKILDRMH-RQKVAEVEK 234
Query: 498 KVKIETSAITVPLPAKPVTDGEKESTLD 581
+ L + E+ TLD
Sbjct: 235 LTQTVRELEEAVLAGGAAANAEERKTLD 262
>08_02_0154 -
13324384-13325351,13326306-13326502,13326695-13327274,
13328324-13328446,13328803-13329130
Length = 731
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 339 ITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLE 458
I ++L+Q+AQK + +P+ V + PKT ET+E
Sbjct: 362 IRAKKLEQLAQKKPPSAPKPKKVWREKPKTPAPSPPETIE 401
>08_02_0151 -
13287964-13288661,13289616-13289812,13290005-13290523,
13290912-13291114
Length = 538
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 339 ITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLE 458
I ++L+Q+AQK + +P+ V + PKT ET+E
Sbjct: 259 IRAKKLEQLAQKKPPSAPKPKKVWREKPKTPAPSPPETIE 298
>08_02_0146 -
13195691-13196658,13197613-13197809,13198002-13198479,
13199660-13199782,13200139-13200466
Length = 697
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 339 ITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLE 458
I ++L+Q+AQK + +P+ V + PKT ET+E
Sbjct: 328 IRAKKLEQLAQKKPPSAPKPKKVWREKPKTPAPSPPETIE 367
>03_02_0837 - 11640169-11640447
Length = 92
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 381 SALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIETSAITVPL 536
SA E + S SP TVE E + VRE E+TK++V + S + PL
Sbjct: 18 SARSGGEAIGSGSPVTVEEEE-----EAVVREGDEETKQRVVVVVSWLLAPL 64
>03_01_0586 -
4339090-4339194,4340186-4340366,4340531-4340601,
4340689-4340826,4341342-4342337
Length = 496
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 378 ESALDEPEVVKSDSPKTVEIPEN---ETLEQMAVRELMEDTKKKVKIETSAITVPLPAKP 548
++A DEP+ V + P +V PEN + L+ ++ E + E ++ +P+ P
Sbjct: 226 KAATDEPDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDTDEPSGEYDEPSLQIPSVP 285
Query: 549 VTDGEKESTL 578
+ D ++TL
Sbjct: 286 IIDESHDTTL 295
>10_08_0003 -
13992276-13992311,13992461-13992598,13992682-13992852,
13992926-13992989,13993404-13993552,13993700-13993753,
13993894-13994034,13994134-13994412,13994518-13994743,
13995328-13995734
Length = 554
Score = 27.9 bits (59), Expect = 9.0
Identities = 36/161 (22%), Positives = 65/161 (40%), Gaps = 1/161 (0%)
Frame = +3
Query: 189 FMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIA 368
F++ KK + +E +D++ ++ S++ G ++TP + + L+T K
Sbjct: 291 FIRQKKVLRGFDEEVRDFV--ADQMSLR--GITFHTEETPQAVMKSDDGLLTLTTNKGSI 346
Query: 369 QKVESALDEPEV-VKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIETSAITVPLPAK 545
L EV VK D + + E ++ + D +V + A+ + A
Sbjct: 347 NGFSHNLGLEEVGVKMDKHGAIVVDEFSRTSVDSIWAV-GDVTNRVNLTPVAL-MEGGAL 404
Query: 546 PVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNKDLPKY 668
T E T DY +VP F + +G T K + KY
Sbjct: 405 ARTIFGNEPTKPDYSAVPSAVFSQPPIGQVGLTEEKAIEKY 445
>05_02_0065 -
6276439-6276462,6276716-6276781,6277035-6277100,
6277384-6277449,6277698-6277745,6278233-6278292,
6278418-6278483,6278569-6278652,6278736-6278801,
6278878-6279036,6279106-6279222,6279305-6279397,
6279697-6279900,6280013-6280161,6280234-6280492
Length = 508
Score = 27.9 bits (59), Expect = 9.0
Identities = 27/103 (26%), Positives = 44/103 (42%)
Frame = +3
Query: 351 RLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIETSAITV 530
R + I Q E L E + + ++PK + P + V+E EDT V E + T
Sbjct: 5 RRRCIVQSHEEYLSEEHIAEENAPKQLATPSEQETICSDVQEGNEDTNDDVG-EANEDTD 63
Query: 531 PLPAKPVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNKDL 659
+ +G +ES DD + ++D + G T KD+
Sbjct: 64 DDASMNAGEGNEES--DDDVEINVRDEN-GTIETRGKTKLKDI 103
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 324 KPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETL-EQMAVRELMEDTKKK 500
K ++I+ + + +E+ D P + + K E +N+T+ + V + +ED+ ++
Sbjct: 2821 KKESMISNNEVSNFEKALETHSDSPNLHVNQDKKD-ETADNQTVVDHNTVLDKLEDSNRQ 2879
Query: 501 VKIETSAITVP 533
+ ET+A +P
Sbjct: 2880 EEQETAAQKLP 2890
>01_04_0063 -
15574855-15575143,15575398-15575602,15575746-15575947,
15576038-15576613,15576623-15576786,15576826-15576928,
15577259-15577847,15578056-15578372
Length = 814
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 318 PMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKT 428
P+KP I ++L+Q AQK S+ +P+ V + PKT
Sbjct: 601 PVKPP--IPAKKLEQPAQKKPSSAPKPKKVWKEKPKT 635
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,964,491
Number of Sequences: 37544
Number of extensions: 289307
Number of successful extensions: 943
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -