Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt20a01
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003148-1|AAH03148.1| 476|Homo sapiens G patch domain and KOW ... 55 3e-07
BC000397-1|AAH00397.1| 476|Homo sapiens G patch domain and KOW ... 55 3e-07
AB209806-1|BAD93043.1| 475|Homo sapiens G patch domain and KOW ... 55 3e-07
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein. 40 0.009
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 40 0.009
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr... 33 0.81
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 32 1.9
AL354659-2|CAH70664.1| 528|Homo sapiens G patch domain containi... 32 1.9
AK001114-1|BAA91509.1| 528|Homo sapiens protein ( Homo sapiens ... 32 1.9
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 32 1.9
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 32 1.9
BC128058-1|AAI28059.1| 722|Homo sapiens CEP78 protein protein. 32 2.5
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 32 2.5
AL353705-5|CAI40237.1| 689|Homo sapiens centrosomal protein 78k... 32 2.5
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 32 2.5
AK022705-1|BAB14190.1| 665|Homo sapiens protein ( Homo sapiens ... 32 2.5
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 32 2.5
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 31 3.3
U18985-1|AAA75315.1| 729|Homo sapiens triadin protein. 31 3.3
EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein. 31 3.3
D21262-1|BAA04803.1| 707|Homo sapiens ORF protein. 31 3.3
AL603911-1|CAI14448.1| 721|Homo sapiens triadin protein. 31 3.3
AL603902-1|CAH70824.1| 721|Homo sapiens triadin protein. 31 3.3
AL445259-1|CAI41045.1| 721|Homo sapiens triadin protein. 31 3.3
AL357352-1|CAI16757.1| 721|Homo sapiens triadin protein. 31 3.3
AL133257-1|CAI19636.1| 721|Homo sapiens triadin protein. 31 3.3
AY686224-1|AAT95434.1| 153|Homo sapiens voltage-gated sodium ch... 31 4.3
Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein. 31 5.7
EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein. 31 5.7
BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium p... 31 5.7
AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD... 31 5.7
>BC003148-1|AAH03148.1| 476|Homo sapiens G patch domain and KOW
motifs protein.
Length = 476
Score = 54.8 bits (126), Expect = 3e-07
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Frame = +3
Query: 177 ISFGFMKTKKAEKPVVD---------EKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKP 329
ISFGF +T A + + D E+KD+++ VE + ++ V +E + L+IP+
Sbjct: 19 ISFGFTRTS-ARRRLADSGDGAGPSPEEKDFLKTVEGRELQSVKPQEAPKE--LVIPLIQ 75
Query: 330 NTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKI 509
N + ++ VV S + K + ++LE+ ++ T I
Sbjct: 76 NGHRRQPPARPPGPSTDTGALADGVV-SQAVKELIAESKKSLEERE-NAGVDPTLAIPMI 133
Query: 510 ETSAITVPLPAKPVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNK-------DLPKY 668
+ A E +Y++VP++ +G+AMLRGMGW P + + K
Sbjct: 134 QKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKP 193
Query: 669 KQPQLRPKGLGLGAD 713
+ LRPKGLGLGA+
Sbjct: 194 RVNSLRPKGLGLGAN 208
>BC000397-1|AAH00397.1| 476|Homo sapiens G patch domain and KOW
motifs protein.
Length = 476
Score = 54.8 bits (126), Expect = 3e-07
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Frame = +3
Query: 177 ISFGFMKTKKAEKPVVD---------EKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKP 329
ISFGF +T A + + D E+KD+++ VE + ++ V +E + L+IP+
Sbjct: 19 ISFGFTRTS-ARRRLADSGDGAGPSPEEKDFLKTVEGRELQSVKPQEAPKE--LVIPLIQ 75
Query: 330 NTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKI 509
N + ++ VV S + K + ++LE+ ++ T I
Sbjct: 76 NGHRRQPPARPPGPSTDTGALADGVV-SQAVKELIAESKKSLEERE-NAGVDPTLAIPMI 133
Query: 510 ETSAITVPLPAKPVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNK-------DLPKY 668
+ A E +Y++VP++ +G+AMLRGMGW P + + K
Sbjct: 134 QKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKP 193
Query: 669 KQPQLRPKGLGLGAD 713
+ LRPKGLGLGA+
Sbjct: 194 RVNSLRPKGLGLGAN 208
>AB209806-1|BAD93043.1| 475|Homo sapiens G patch domain and KOW
motifs variant protein.
Length = 475
Score = 54.8 bits (126), Expect = 3e-07
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Frame = +3
Query: 177 ISFGFMKTKKAEKPVVD---------EKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKP 329
ISFGF +T A + + D E+KD+++ VE + ++ V +E + L+IP+
Sbjct: 18 ISFGFTRTS-ARRRLADSGDGAGPSPEEKDFLKTVEGRELQSVKPQEAPKE--LVIPLIQ 74
Query: 330 NTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKI 509
N + ++ VV S + K + ++LE+ ++ T I
Sbjct: 75 NGHRRQPPARPPGPSTDTGALADGVV-SQAVKELIAESKKSLEERE-NAGVDPTLAIPMI 132
Query: 510 ETSAITVPLPAKPVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNK-------DLPKY 668
+ A E +Y++VP++ +G+AMLRGMGW P + + K
Sbjct: 133 QKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKP 192
Query: 669 KQPQLRPKGLGLGAD 713
+ LRPKGLGLGA+
Sbjct: 193 RVNSLRPKGLGLGAN 207
>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
Length = 7962
Score = 39.9 bits (89), Expect = 0.009
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 4/187 (2%)
Frame = +3
Query: 144 RTIRTKMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEK-SIKVVGAEEIKDDTPLI-I 317
+ ++ + +K+ K K P V E+ + EEK I + E+ + P +
Sbjct: 6478 KVLKKAVPEEKVPVPIPKKLKPPPPKVPEEPKKV--FEEKIHISITKREKEQVTEPAAKV 6535
Query: 318 PMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENET--LEQMAVRELMEDT 491
PMKP ++ E++ ++V + PEV K P+ V E +E+ V E E
Sbjct: 6536 PMKPKRVVAEEKVPVPRKEVAPPVRVPEVPKELEPEEVAFEEEVVTHVEEYLVEEEEEYI 6595
Query: 492 KKKVKIETSAITVPLPAKPVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNKDLPKYK 671
++ + T VP+ V + ++ ++ VP+ A + P K P+ K
Sbjct: 6596 HEEEEFITEEEVVPVIPVKVPEVPRKPVPEEKKPVPVPKKKEAPPAKVPEVPKK--PEEK 6653
Query: 672 QPQLRPK 692
P L PK
Sbjct: 6654 VPVLIPK 6660
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 39.9 bits (89), Expect = 0.009
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 4/187 (2%)
Frame = +3
Query: 144 RTIRTKMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEK-SIKVVGAEEIKDDTPLI-I 317
+ ++ + +K+ K K P V E+ + EEK I + E+ + P +
Sbjct: 10740 KVLKKAVPEEKVPVPIPKKLKPPPPKVPEEPKKV--FEEKIRISITKREKEQVTEPAAKV 10797
Query: 318 PMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENET--LEQMAVRELMEDT 491
PMKP ++ E++ ++V + PEV K P+ V E +E+ V E E
Sbjct: 10798 PMKPKRVVAEEKVPVPRKEVAPPVRVPEVPKELEPEEVAFEEEVVTHVEEYLVEEEEEYI 10857
Query: 492 KKKVKIETSAITVPLPAKPVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNKDLPKYK 671
++ + T VP+ V + ++ ++ VP+ A + P K P+ K
Sbjct: 10858 HEEEEFITEEEVVPVIPVKVPEVPRKPVPEEKKPVPVPKKKEAPPAKVPEVPKK--PEEK 10915
Query: 672 QPQLRPK 692
P L PK
Sbjct: 10916 VPVLIPK 10922
>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated
protein 1B protein.
Length = 2468
Score = 33.5 bits (73), Expect = 0.81
Identities = 32/104 (30%), Positives = 49/104 (47%)
Frame = +3
Query: 195 KTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQK 374
KT K E V E K +EK K V +E D TP+ KP + +K+ +K
Sbjct: 636 KTVKKETKVKPEDKKE---EKEKPKKEVAKKE--DKTPIKKEEKPKKEEVKKEVKKEIKK 690
Query: 375 VESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVK 506
E + EV K PK V+ E + E+ V++ ++ KK++K
Sbjct: 691 EEKKEPKKEVKKETPPKEVK-KEVKKEEKKEVKKEEKEPKKEIK 733
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 32.3 bits (70), Expect = 1.9
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Frame = +3
Query: 201 KKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQK-V 377
+KA+ PV +E K + + K + + + TP K ++ + A+ V
Sbjct: 740 EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPA----KEEARSPADKFPEKAKSPV 795
Query: 378 ESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKK--KVKIE---TSAITVPLPA 542
+ + PE KS + + PE E ++ V+ +++ +K +VK++ A PA
Sbjct: 796 KEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA 855
Query: 543 KPVTDGEKESTLDD 584
P T+ +K+S ++
Sbjct: 856 TPKTEEKKDSKKEE 869
>AL354659-2|CAH70664.1| 528|Homo sapiens G patch domain containing
2 protein.
Length = 528
Score = 32.3 bits (70), Expect = 1.9
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Frame = +3
Query: 606 DFGMAMLRGMGWTP-------NKDLPKYKQPQLRPKGLGLG 707
+ G ML+ MGWTP K + + Q RPKGLGLG
Sbjct: 469 NIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
>AK001114-1|BAA91509.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ10252 fis, clone HEMBB1000807. ).
Length = 528
Score = 32.3 bits (70), Expect = 1.9
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Frame = +3
Query: 606 DFGMAMLRGMGWTP-------NKDLPKYKQPQLRPKGLGLG 707
+ G ML+ MGWTP K + + Q RPKGLGLG
Sbjct: 469 NIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 32.3 bits (70), Expect = 1.9
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Frame = +3
Query: 201 KKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQK-V 377
+KA+ PV +E K + + K + + + TP K ++ + A+ V
Sbjct: 740 EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPA----KEEARSPADKFPEKAKSPV 795
Query: 378 ESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKK--KVKIE---TSAITVPLPA 542
+ + PE KS + + PE E ++ V+ +++ +K +VK++ A PA
Sbjct: 796 KEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA 855
Query: 543 KPVTDGEKESTLDD 584
P T+ +K+S ++
Sbjct: 856 TPKTEEKKDSKKEE 869
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 32.3 bits (70), Expect = 1.9
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Frame = +3
Query: 201 KKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQK-V 377
+KA+ PV +E K + + K + + + TP K ++ + A+ V
Sbjct: 748 EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPA----KEEARSPADKFPEKAKSPV 803
Query: 378 ESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKK--KVKIE---TSAITVPLPA 542
+ + PE KS + + PE E ++ V+ +++ +K +VK++ A PA
Sbjct: 804 KEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA 863
Query: 543 KPVTDGEKESTLDD 584
P T+ +K+S ++
Sbjct: 864 TPKTEEKKDSKKEE 877
>BC128058-1|AAI28059.1| 722|Homo sapiens CEP78 protein protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 375 VES-ALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
VES + E E V S E+PE ++EQ A++E +E+ K++K E
Sbjct: 428 VESPSSSEVEEVDDSSESVHEVPEKTSIEQEALQEKLEECLKQLKEE 474
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 31.9 bits (69), Expect = 2.5
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Frame = +3
Query: 108 LLVCFSKFVQFIRT-IRTKMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKV--V 278
L F++F + I K +GK FGF++ K + K ++ ++ +++ V
Sbjct: 130 LKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDWA 189
Query: 279 GAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLE 458
A++ DT + + ++ + + +K D E D + + +
Sbjct: 190 VAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVFDD 249
Query: 459 QMAVRELMED-TKKKVKIETSAITVPLPAKPVTDGEKESTLDDYDSV 596
+ E +E K V+I+ A+ P PAK E++S L++ DS+
Sbjct: 250 EDEEEENIESKVTKPVQIQKRAVKRPAPAKSSDHSEEDSDLEESDSI 296
>AL353705-5|CAI40237.1| 689|Homo sapiens centrosomal protein 78kDa
protein.
Length = 689
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 375 VES-ALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
VES + E E V S E+PE ++EQ A++E +E+ K++K E
Sbjct: 427 VESPSSSEVEEVDDSSESVHEVPEKTSIEQEALQEKLEECLKQLKEE 473
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 31.9 bits (69), Expect = 2.5
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Frame = +3
Query: 108 LLVCFSKFVQFIRT-IRTKMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKV--V 278
L F++F + I K +GK FGF++ K + K ++ ++ +++ V
Sbjct: 130 LKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDWA 189
Query: 279 GAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLE 458
A++ DT + + ++ + + +K D E D + + +
Sbjct: 190 VAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVFDD 249
Query: 459 QMAVRELMED-TKKKVKIETSAITVPLPAKPVTDGEKESTLDDYDSV 596
+ E +E K V+I+ A+ P PAK E++S L++ DS+
Sbjct: 250 EDEEEENIESKVTKPVQIQKRAVKRPAPAKSSDHSEEDSDLEESDSI 296
>AK022705-1|BAB14190.1| 665|Homo sapiens protein ( Homo sapiens
cDNA FLJ12643 fis, clone NT2RM4001969, moderately
similar to R.norvegicus mRNA for IP63 protein. ).
Length = 665
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 375 VES-ALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
VES + E E V S E+PE ++EQ A++E +E+ K++K E
Sbjct: 427 VESPSSSEVEEVDDSSESVHEVPERTSIEQEALQEKLEECLKQLKEE 473
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 31.9 bits (69), Expect = 2.5
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Frame = +3
Query: 108 LLVCFSKFVQFIRT-IRTKMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKV--V 278
L F++F + I K +GK FGF++ K + K ++ ++ +++ V
Sbjct: 130 LKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDWA 189
Query: 279 GAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLE 458
A++ DT + + ++ + + +K D E D + + +
Sbjct: 190 VAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVFDD 249
Query: 459 QMAVRELMED-TKKKVKIETSAITVPLPAKPVTDGEKESTLDDYDSV 596
+ E +E K V+I+ A+ P PAK E++S L++ DS+
Sbjct: 250 EDEEEENIESKVTKPVQIQKRAVKRPAPAKSSDHSEEDSDLEESDSI 296
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 31.5 bits (68), Expect = 3.3
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Frame = +3
Query: 201 KKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQK-V 377
+KA+ PV +E K + + K + + + TP K ++ + A+ V
Sbjct: 734 EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPA----KEEARSPADKFPEKAKSPV 789
Query: 378 ESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKK--KVKIE---TSAITVPLPA 542
+ + PE KS + PE E ++ V+ +++ +K +VK++ A PA
Sbjct: 790 KEEVKSPEKAKSPLKADAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA 849
Query: 543 KPVTDGEKESTLDD 584
P T+ +K+S ++
Sbjct: 850 TPKTEEKKDSKKEE 863
>U18985-1|AAA75315.1| 729|Homo sapiens triadin protein.
Length = 729
Score = 31.5 bits (68), Expect = 3.3
Identities = 29/118 (24%), Positives = 50/118 (42%)
Frame = +3
Query: 159 KMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTL 338
+++GKK + KK KP + EK + K K V K + ++ +K T+
Sbjct: 513 QLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHG--KPEEKVLKQVKAVTI 570
Query: 339 ITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
T + K +K E EP +K+D PK +E E + + + + K K +
Sbjct: 571 EKTAKPKP-TKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKAD 627
>EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein.
Length = 877
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +3
Query: 252 VEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTV 431
VEEKS +V EE+ D + P K + + +++ + S E KS PK+
Sbjct: 588 VEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKS- 646
Query: 432 EIPENETLEQMAVRELMEDTKKKVK 506
+ E ++ ++ E E+ +K+VK
Sbjct: 647 PVEEAKSKAEVGKGEQKEEEEKEVK 671
>D21262-1|BAA04803.1| 707|Homo sapiens ORF protein.
Length = 707
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 408 KSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIETSAITVPLPAKPVTDGEKESTLDDY 587
K+DS + E E+ + E+ ++++ TK K T+ +PLPAK G ++S+ D
Sbjct: 428 KADSSSSEE--ESSSSEEEKTKKMVATTKPKA---TAKAALPLPAKQAPQGSRDSSSDSD 482
Query: 588 DS 593
S
Sbjct: 483 SS 484
>AL603911-1|CAI14448.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.5 bits (68), Expect = 3.3
Identities = 29/118 (24%), Positives = 50/118 (42%)
Frame = +3
Query: 159 KMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTL 338
+++GKK + KK KP + EK + K K V K + ++ +K T+
Sbjct: 513 QLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHG--KPEEKVLKQVKAVTI 570
Query: 339 ITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
T + K +K E EP +K+D PK +E E + + + + K K +
Sbjct: 571 EKTAKPKP-TKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKAD 627
>AL603902-1|CAH70824.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.5 bits (68), Expect = 3.3
Identities = 29/118 (24%), Positives = 50/118 (42%)
Frame = +3
Query: 159 KMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTL 338
+++GKK + KK KP + EK + K K V K + ++ +K T+
Sbjct: 513 QLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHG--KPEEKVLKQVKAVTI 570
Query: 339 ITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
T + K +K E EP +K+D PK +E E + + + + K K +
Sbjct: 571 EKTAKPKP-TKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKAD 627
>AL445259-1|CAI41045.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.5 bits (68), Expect = 3.3
Identities = 29/118 (24%), Positives = 50/118 (42%)
Frame = +3
Query: 159 KMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTL 338
+++GKK + KK KP + EK + K K V K + ++ +K T+
Sbjct: 513 QLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHG--KPEEKVLKQVKAVTI 570
Query: 339 ITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
T + K +K E EP +K+D PK +E E + + + + K K +
Sbjct: 571 EKTAKPKP-TKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKAD 627
>AL357352-1|CAI16757.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.5 bits (68), Expect = 3.3
Identities = 29/118 (24%), Positives = 50/118 (42%)
Frame = +3
Query: 159 KMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTL 338
+++GKK + KK KP + EK + K K V K + ++ +K T+
Sbjct: 513 QLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHG--KPEEKVLKQVKAVTI 570
Query: 339 ITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
T + K +K E EP +K+D PK +E E + + + + K K +
Sbjct: 571 EKTAKPKP-TKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKAD 627
>AL133257-1|CAI19636.1| 721|Homo sapiens triadin protein.
Length = 721
Score = 31.5 bits (68), Expect = 3.3
Identities = 29/118 (24%), Positives = 50/118 (42%)
Frame = +3
Query: 159 KMEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTL 338
+++GKK + KK KP + EK + K K V K + ++ +K T+
Sbjct: 513 QLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHG--KPEEKVLKQVKAVTI 570
Query: 339 ITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVKIE 512
T + K +K E EP +K+D PK +E E + + + + K K +
Sbjct: 571 EKTAKPKP-TKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKAD 627
>AY686224-1|AAT95434.1| 153|Homo sapiens voltage-gated sodium
channel Nav1.9 protein.
Length = 153
Score = 31.1 bits (67), Expect = 4.3
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +3
Query: 540 AKPVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNKDLPKYKQPQLRPKGLGLGADXV 719
A+ +T E E D S+ + + + G GW P +PK + + PKG G
Sbjct: 11 AQRITQPEPEQQKSDVTSILSECSTIDLQDGFGWLPEM-VPKKQPERCLPKGFGCCFPCC 69
Query: 720 VSDKKK 737
DK+K
Sbjct: 70 SVDKRK 75
>Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein.
Length = 916
Score = 30.7 bits (66), Expect = 5.7
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 252 VEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKT- 428
VEEKS +V EE+ D + P K + + +++ + E KS PK+
Sbjct: 588 VEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSP 647
Query: 429 VEIPENETLEQMAVRELMEDTKKKVKIETSAITVPLPAKPVTDGEKES 572
VE + + V E + K +E A + P+P PV + + ++
Sbjct: 648 VEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKS-PVPKSPVEEAKSKA 694
>EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein.
Length = 916
Score = 30.7 bits (66), Expect = 5.7
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 252 VEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKT- 428
VEEKS +V EE+ D + P K + + +++ + E KS PK+
Sbjct: 588 VEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSP 647
Query: 429 VEIPENETLEQMAVRELMEDTKKKVKIETSAITVPLPAKPVTDGEKES 572
VE + + V E + K +E A + P+P PV + + ++
Sbjct: 648 VEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKS-PVPKSPVEEAKSKA 694
>BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium
polypeptide 150kDa protein.
Length = 916
Score = 30.7 bits (66), Expect = 5.7
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 252 VEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKT- 428
VEEKS +V EE+ D + P K + + +++ + E KS PK+
Sbjct: 588 VEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSP 647
Query: 429 VEIPENETLEQMAVRELMEDTKKKVKIETSAITVPLPAKPVTDGEKES 572
VE + + V E + K +E A + P+P PV + + ++
Sbjct: 648 VEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKS-PVPKSPVEEAKSKA 694
>AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD
medium) protein.
Length = 260
Score = 30.7 bits (66), Expect = 5.7
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 252 VEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKT- 428
VEEKS +V EE+ D + P K + + +++ + E KS PK+
Sbjct: 151 VEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSP 210
Query: 429 VEIPENETLEQMAVRELMEDTKKKVKIETSAITVPLPAKPVTDGEKES 572
VE + + V E + K +E A + P+P PV + + ++
Sbjct: 211 VEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKS-PVPKSPVEEAKSKA 257
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,717,543
Number of Sequences: 237096
Number of extensions: 1630395
Number of successful extensions: 4895
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4871
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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