Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1p23
         (139 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    20   3.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   4.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   5.4  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 120 ITIYSKNQNRSL*VVIIYFL 61
           + +YS  QNRS  +   YF+
Sbjct: 217 LIVYSWEQNRSWRITHSYFM 236


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 108 SKNQNRSL*VVIIYFLNYFCGLSRVETEEYSN 13
           +KN N     V   F N +CG   +  E  SN
Sbjct: 92  NKNCNAGSLTVKKNFANKYCGNITLNIESTSN 123


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 48  GLSRVETEEYSN 13
           GL  V+TE++SN
Sbjct: 277 GLYYVDTEQFSN 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,285
Number of Sequences: 438
Number of extensions: 482
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 26
effective length of database: 134,955
effective search space used:  2564145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)