Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1p21
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.7
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 2.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 2.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 3.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 9.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 9.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 9.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 9.0
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 9.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 9.0
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 221 TTINHYLIKLHKVYFLSM-LVLPSCLDFTIALLFFY 117
T I Y+I K F ++ L+LP+ L + +L FY
Sbjct: 221 TDITFYIIIRRKTLFYTVNLILPTVLISFLCVLVFY 256
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -3
Query: 206 YLIKLHK--VYFLSMLVLPSCLDFTIALLFFY 117
Y I+L + ++++ L+LP L ++ALL FY
Sbjct: 205 YEIRLRRRPMFYVFNLILPCILINSVALLVFY 236
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -1
Query: 127 CFFTKISTLYLF*FCKFLSGFITFITNILAVLG 29
C+FT T C F++G + ++ +L ++G
Sbjct: 164 CYFTAHVTHPRHRLCVFVAGVVFIVSGLLMLVG 196
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.0 bits (47), Expect = 2.9
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = +3
Query: 663 WCCQELDYTHPIYKEYACL 719
W C + + +Y EY C+
Sbjct: 558 WVCDQCEEYEYVYDEYTCM 576
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 383 YLKSAFQIKEPYPKTHI 333
YLK ++ +EP KTH+
Sbjct: 410 YLKPSYDAQEPAWKTHV 426
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 291 IIELVKPYSYCNRKNIKYICLIYNHN 214
I L Y+Y N N Y L YN N
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 291 IIELVKPYSYCNRKNIKYICLIYNHN 214
I L Y+Y N N Y L YN N
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 291 IIELVKPYSYCNRKNIKYICLIYNHN 214
I L Y+Y N N Y L YN N
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 291 IIELVKPYSYCNRKNIKYICLIYNHN 214
I L Y+Y N N Y L YN N
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 291 IIELVKPYSYCNRKNIKYICLIYNHN 214
I L Y+Y N N Y L YN N
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 291 IIELVKPYSYCNRKNIKYICLIYNHN 214
I L Y+Y N N Y L YN N
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNIN 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,359
Number of Sequences: 438
Number of extensions: 4715
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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