Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1o12
         (801 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S79862-1|AAB35397.1|  504|Homo sapiens 26 S protease subunit 5b ...    47   9e-05
BC014478-1|AAH14478.1|  504|Homo sapiens proteasome (prosome, ma...    47   9e-05
AL161911-7|CAI95118.1|  504|Homo sapiens proteasome (prosome, ma...    47   9e-05
D31889-1|BAA06687.1|  503|Homo sapiens KIAA0072 protein.               46   1e-04

>S79862-1|AAB35397.1|  504|Homo sapiens 26 S protease subunit 5b
           protein.
          Length = 504

 Score = 46.8 bits (106), Expect = 9e-05
 Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 8/226 (3%)
 Frame = +2

Query: 128 MDAEVAEQLRDLITRLQTDEDIPSAMNQLKTLLVSAP-TEISETILEVGLSKILQCFNIF 304
           M A+    LR+ + RL+   +    +  L ++L + P  E+ +   E+ L  +    N  
Sbjct: 1   MAAQALALLRE-VARLEAPLE---ELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNEN 56

Query: 305 DRHLVDLICEVLTLCFEKFSPGEVIKSFTGNFMYLLRHENAHVRRLAVDEIAKAVISSSN 484
            R    L   +L    +   P  V ++   +    L H +  V+ L + +I + V +S  
Sbjct: 57  HREKTTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDA 116

Query: 485 ALPIPQYIDVYVAVGQLVGDNDIGVANKAI-------LITSNLPEEAYTKVLEEMKIXXX 643
              I    ++   +   +G  ++ VA  AI       L  + L     + +L+++K    
Sbjct: 117 VTEILNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMK 176

Query: 644 XXXXXXXNVFEVIINISIKSYDLFKICLELGYIDIMVQEIQSLDVL 781
                   V+E+II IS  S +    C   G +  +++E+   DVL
Sbjct: 177 TNDIVRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVL 222


>BC014478-1|AAH14478.1|  504|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 504

 Score = 46.8 bits (106), Expect = 9e-05
 Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 8/226 (3%)
 Frame = +2

Query: 128 MDAEVAEQLRDLITRLQTDEDIPSAMNQLKTLLVSAP-TEISETILEVGLSKILQCFNIF 304
           M A+    LR+ + RL+   +    +  L ++L + P  E+ +   E+ L  +    N  
Sbjct: 1   MAAQALALLRE-VARLEAPLE---ELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNEN 56

Query: 305 DRHLVDLICEVLTLCFEKFSPGEVIKSFTGNFMYLLRHENAHVRRLAVDEIAKAVISSSN 484
            R    L   +L    +   P  V ++   +    L H +  V+ L + +I + V +S  
Sbjct: 57  HREKTTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDA 116

Query: 485 ALPIPQYIDVYVAVGQLVGDNDIGVANKAI-------LITSNLPEEAYTKVLEEMKIXXX 643
              I    ++   +   +G  ++ VA  AI       L  + L     + +L+++K    
Sbjct: 117 VTEILNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMK 176

Query: 644 XXXXXXXNVFEVIINISIKSYDLFKICLELGYIDIMVQEIQSLDVL 781
                   V+E+II IS  S +    C   G +  +++E+   DVL
Sbjct: 177 TNDIVRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVL 222


>AL161911-7|CAI95118.1|  504|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 504

 Score = 46.8 bits (106), Expect = 9e-05
 Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 8/226 (3%)
 Frame = +2

Query: 128 MDAEVAEQLRDLITRLQTDEDIPSAMNQLKTLLVSAP-TEISETILEVGLSKILQCFNIF 304
           M A+    LR+ + RL+   +    +  L ++L + P  E+ +   E+ L  +    N  
Sbjct: 1   MAAQALALLRE-VARLEAPLE---ELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNEN 56

Query: 305 DRHLVDLICEVLTLCFEKFSPGEVIKSFTGNFMYLLRHENAHVRRLAVDEIAKAVISSSN 484
            R    L   +L    +   P  V ++   +    L H +  V+ L + +I + V +S  
Sbjct: 57  HREKTTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDA 116

Query: 485 ALPIPQYIDVYVAVGQLVGDNDIGVANKAI-------LITSNLPEEAYTKVLEEMKIXXX 643
              I    ++   +   +G  ++ VA  AI       L  + L     + +L+++K    
Sbjct: 117 VTEILNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMK 176

Query: 644 XXXXXXXNVFEVIINISIKSYDLFKICLELGYIDIMVQEIQSLDVL 781
                   V+E+II IS  S +    C   G +  +++E+   DVL
Sbjct: 177 TNDIVRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVL 222


>D31889-1|BAA06687.1|  503|Homo sapiens KIAA0072 protein.
          Length = 503

 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 8/201 (3%)
 Frame = +2

Query: 203 MNQLKTLLVSAP-TEISETILEVGLSKILQCFNIFDRHLVDLICEVLTLCFEKFSPGEVI 379
           +  L ++L + P  E+ +   E+ L  +    N   R    L   +L    +   P  V 
Sbjct: 21  LRALHSVLQAVPLNELRQQAAELRLGPLFSLLNENHREKTTLCVSILERLLQAMEPVHVA 80

Query: 380 KSFTGNFMYLLRHENAHVRRLAVDEIAKAVISSSNALPIPQYIDVYVAVGQLVGDNDIGV 559
           ++   +    L H +  V+ L + +I + V +S     I    ++   +   +G  ++ V
Sbjct: 81  RNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSDAVTEILNNAELLKQIVYCIGGENLSV 140

Query: 560 ANKAI-------LITSNLPEEAYTKVLEEMKIXXXXXXXXXXNVFEVIINISIKSYDLFK 718
           A  AI       L  + L     + +L+++K            V+E+II IS  S +   
Sbjct: 141 AKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMKTNDIVRYRVYELIIEISSVSPESLN 200

Query: 719 ICLELGYIDIMVQEIQSLDVL 781
            C   G +  +++E+   DVL
Sbjct: 201 YCTTSGLVTQLLRELTGEDVL 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,084,218
Number of Sequences: 237096
Number of extensions: 1938942
Number of successful extensions: 7324
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7324
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)