Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1m16
         (404 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC004144-1|AAC27979.1| 1007|Homo sapiens R34001_1 protein.             30   2.6  
X89961-1|CAD56487.1|  116|Homo sapiens mitochondrial capsule sel...    29   5.9  
X89960-1|CAA62000.1|  116|Homo sapiens mitochondrial capsule sel...    29   5.9  
BC016744-1|AAH16744.1|  116|Homo sapiens sperm mitochondria-asso...    29   5.9  
BC014593-1|AAH14593.1|  116|Homo sapiens sperm mitochondria-asso...    29   5.9  
AL162596-3|CAI19552.1|  116|Homo sapiens sperm mitochondria-asso...    29   5.9  

>AC004144-1|AAC27979.1| 1007|Homo sapiens R34001_1 protein.
          Length = 1007

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 206  CQPTSLQCCAPLWNCIHCCYIRRC 277
            C P   Q C P WN    C+ R C
Sbjct: 965  CTPWPAQTCRPCWNTTRSCWCRPC 988


>X89961-1|CAD56487.1|  116|Homo sapiens mitochondrial capsule
           selenoprotein protein.
          Length = 116

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 206 CQPTSLQCCAPLWNCIHCC 262
           CQP   QCC P  N  HCC
Sbjct: 43  CQPKGSQCCPPKHN--HCC 59


>X89960-1|CAA62000.1|  116|Homo sapiens mitochondrial capsule
           selenoprotein protein.
          Length = 116

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 206 CQPTSLQCCAPLWNCIHCC 262
           CQP   QCC P  N  HCC
Sbjct: 43  CQPKGSQCCPPKHN--HCC 59


>BC016744-1|AAH16744.1|  116|Homo sapiens sperm
           mitochondria-associated cysteine-rich protein protein.
          Length = 116

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 206 CQPTSLQCCAPLWNCIHCC 262
           CQP   QCC P  N  HCC
Sbjct: 43  CQPKGSQCCPPKHN--HCC 59


>BC014593-1|AAH14593.1|  116|Homo sapiens sperm
           mitochondria-associated cysteine-rich protein protein.
          Length = 116

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 206 CQPTSLQCCAPLWNCIHCC 262
           CQP   QCC P  N  HCC
Sbjct: 43  CQPKGSQCCPPKHN--HCC 59


>AL162596-3|CAI19552.1|  116|Homo sapiens sperm
           mitochondria-associated cysteine-rich protein protein.
          Length = 116

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 206 CQPTSLQCCAPLWNCIHCC 262
           CQP   QCC P  N  HCC
Sbjct: 43  CQPKGSQCCPPKHN--HCC 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,057,322
Number of Sequences: 237096
Number of extensions: 1036251
Number of successful extensions: 2328
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2327
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)