Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1m02
(723 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089689-1|AAL90427.1| 160|Drosophila melanogaster RH65975p pro... 166 2e-41
AE014296-1238|AAF50575.1| 160|Drosophila melanogaster CG4457-PA... 166 2e-41
U35682-1|AAA79181.1| 163|Drosophila melanogaster signal recogni... 144 8e-35
BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p pro... 30 2.8
AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA... 30 2.8
U15803-1|AAC36490.1| 674|Drosophila melanogaster InaD protein. 29 6.4
L27653-1|AAA62385.1| 787|Drosophila melanogaster phosphofructok... 29 6.4
BT004473-1|AAO42637.1| 674|Drosophila melanogaster RH58949p pro... 29 6.4
AF245280-1|AAF81203.1| 674|Drosophila melanogaster INAD protein. 29 6.4
AE013599-3488|AAF46915.1| 674|Drosophila melanogaster CG3504-PA... 29 6.4
AY071235-1|AAL48857.1| 134|Drosophila melanogaster RE27042p pro... 29 8.5
AE014296-1747|AAF50202.1| 134|Drosophila melanogaster CG6736-PA... 29 8.5
>AY089689-1|AAL90427.1| 160|Drosophila melanogaster RH65975p
protein.
Length = 160
Score = 166 bits (404), Expect = 2e-41
Identities = 78/137 (56%), Positives = 99/137 (72%), Gaps = 3/137 (2%)
Frame = +1
Query: 232 MITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGL 411
M +W+P KH+D+ERWICIYPAY+N KKT EGRRLPK CV+NP++ EIRDVL + L
Sbjct: 7 MKKNWSPSMKHNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNL 66
Query: 412 RVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQ 591
+ +ENK Y RE S EM +RGR+RVQ++N DG N +FPTRES+M +I IP+LKTRQ
Sbjct: 67 QFLMENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQ 126
Query: 592 NR---PVEQQPQPTNQA 633
N+ QQ QP + A
Sbjct: 127 NKSGDSYHQQSQPQSNA 143
>AE014296-1238|AAF50575.1| 160|Drosophila melanogaster CG4457-PA
protein.
Length = 160
Score = 166 bits (404), Expect = 2e-41
Identities = 78/137 (56%), Positives = 99/137 (72%), Gaps = 3/137 (2%)
Frame = +1
Query: 232 MITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGL 411
M +W+P KH+D+ERWICIYPAY+N KKT EGRRLPK CV+NP++ EIRDVL + L
Sbjct: 7 MKKNWSPSMKHNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNL 66
Query: 412 RVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQ 591
+ +ENK Y RE S EM +RGR+RVQ++N DG N +FPTRES+M +I IP+LKTRQ
Sbjct: 67 QFLMENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQ 126
Query: 592 NR---PVEQQPQPTNQA 633
N+ QQ QP + A
Sbjct: 127 NKSGDSYHQQSQPQSNA 143
>U35682-1|AAA79181.1| 163|Drosophila melanogaster signal
recognition particle 19kDa protein protein.
Length = 163
Score = 144 bits (350), Expect = 8e-35
Identities = 69/122 (56%), Positives = 87/122 (71%), Gaps = 3/122 (2%)
Frame = +1
Query: 277 RWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGLRVGVENKLYSRECSK 456
RWICIYPAY+N KKT EGRRLPK CV+NP++ EIRD + + L+ +ENK Y RE S
Sbjct: 25 RWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDAVSVSNLQFLMENKKYCRENSS 84
Query: 457 EMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQNR---PVEQQPQPTN 627
EM +RGR+RVQ++N DG N +FPTRES+M +I IP+LKTRQN+ QQ QP +
Sbjct: 85 EMEFRGRVRVQLRNVDGTLYNIDFPTRESIMLHIASKIPQLKTRQNKSGDSYHQQSQPQS 144
Query: 628 QA 633
A
Sbjct: 145 NA 146
>BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p
protein.
Length = 1411
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +1
Query: 388 DVLLATGLRVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGES 567
D L++ +++ ++ +LY RE E++ + R+ + +D+G P+ P R+ K ++
Sbjct: 569 DKLISEDIKIELDKQLYQRESPVEVISKLVARISMIDDNG-PILPSNCVRQIQQKL--QN 625
Query: 568 IPKLK 582
IP L+
Sbjct: 626 IPNLE 630
>AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA
protein.
Length = 1411
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +1
Query: 388 DVLLATGLRVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGES 567
D L++ +++ ++ +LY RE E++ + R+ + +D+G P+ P R+ K ++
Sbjct: 569 DKLISEDIKIELDKQLYQRESPVEVISKLVARISMIDDNG-PILPSNCVRQIQQKL--QN 625
Query: 568 IPKLK 582
IP L+
Sbjct: 626 IPNLE 630
>U15803-1|AAC36490.1| 674|Drosophila melanogaster InaD protein.
Length = 674
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 496 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 597
ND+G V P +FPT K+I + PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370
>L27653-1|AAA62385.1| 787|Drosophila melanogaster
phosphofructokinase protein.
Length = 787
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 265 SDVERWICIYPAYLNSKKTLAEGR 336
SDV W+ AYL SK+TL EG+
Sbjct: 463 SDVSGWVGQGGAYLGSKRTLPEGK 486
>BT004473-1|AAO42637.1| 674|Drosophila melanogaster RH58949p
protein.
Length = 674
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 496 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 597
ND+G V P +FPT K+I + PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370
>AF245280-1|AAF81203.1| 674|Drosophila melanogaster INAD protein.
Length = 674
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 496 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 597
ND+G V P +FPT K+I + PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370
>AE013599-3488|AAF46915.1| 674|Drosophila melanogaster CG3504-PA
protein.
Length = 674
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 496 NDDGAPVNP--EFPTRESVMKYIGESIPKLKTRQNR 597
ND+G V P +FPT K+I + PK +T Q R
Sbjct: 335 NDEGMCVKPIKKFPTASDETKFIFDQFPKARTVQVR 370
>AY071235-1|AAL48857.1| 134|Drosophila melanogaster RE27042p
protein.
Length = 134
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 196 RKFQTK*LDMASMITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTH 375
RK Q D+ + ++KH+D + + PA + +K RR+ C E T+
Sbjct: 67 RKLQQPDEDIEQETETGRLKQKHTDADTEKGVPPAVGSGRKLRRHRRRIAHECCKEGCTY 126
Query: 376 QEIRD 390
+I D
Sbjct: 127 DDILD 131
>AE014296-1747|AAF50202.1| 134|Drosophila melanogaster CG6736-PA
protein.
Length = 134
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 196 RKFQTK*LDMASMITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTH 375
RK Q D+ + ++KH+D + + PA + +K RR+ C E T+
Sbjct: 67 RKLQQPDEDIEQETETGRLKQKHTDADTEKGVPPAVGSGRKLRRHRRRIAHECCKEGCTY 126
Query: 376 QEIRD 390
+I D
Sbjct: 127 DDILD 131
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,052,346
Number of Sequences: 53049
Number of extensions: 621322
Number of successful extensions: 1515
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1515
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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