Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1l24
         (717 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   6.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.8  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 290 FEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALIPDSTRILDYL 430
           +  L+ + + G    SW   I PRGE+    V    I +ST +L  L
Sbjct: 178 YHTLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNSTPLLKKL 224


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 290 FEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALIPDSTRILDYL 430
           +  L+ + + G    SW   I PRGE+    V    I +ST +L  L
Sbjct: 193 YHTLVAEQSYGLTLPSWTNNIFPRGELFDATVFTYNITNSTPLLKKL 239


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = +2

Query: 236 YSFYSQKVLMALYEKNIDFEPLIVDITKGEQYSS 337
           Y+    K++ A +E+N   + + +D+   + Y+S
Sbjct: 551 YADTHAKLVQAAFEQNTTDQSMDIDVCDNQTYTS 584


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 653 NLRKLADENPKAKHILLYK 709
           +L KL + NPK    +LYK
Sbjct: 670 SLGKLTETNPKLARSVLYK 688


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 290 FEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALIPDSTRILDYL 430
           +  L+ + + G    SW   I P+GE+    V    I +ST +L  L
Sbjct: 81  YHTLVAEQSYGLTLPSWTNNIFPKGELFDATVFTYNITNSTPLLKKL 127


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 569  PHLCGSPKLPFILP 610
            P + G+P +P ILP
Sbjct: 1173 PFMAGAPNVPTILP 1186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,883
Number of Sequences: 438
Number of extensions: 3616
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)