Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1l03
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB051470-1|BAB21774.1| 832|Homo sapiens KIAA1683 protein protein. 33 0.97
BC126219-1|AAI26220.1| 917|Homo sapiens scaffold attachment fac... 31 3.9
U72355-1|AAC00056.1| 915|Homo sapiens Hsp27 ERE-TATA-binding pr... 30 6.8
L43631-1|AAC18697.1| 864|Homo sapiens scaffold attachment facto... 30 6.8
AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein. 30 6.8
AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein. 30 6.8
AK127825-1|BAC87149.1| 207|Homo sapiens PROTEIN). protein. 30 6.8
AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein. 30 6.8
DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein. 30 9.0
BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein LO... 30 9.0
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein. 30 9.0
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein. 30 9.0
>AB051470-1|BAB21774.1| 832|Homo sapiens KIAA1683 protein protein.
Length = 832
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 104 EPISVGPALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPA 283
+P P+L I V P L + I V P+L + I V P+L + I V P
Sbjct: 356 QPTGESPSLTQPSLTIRVSPCLAMSSQTIGVSPSLAMPSQTIGVSPSLAMPFHTIGVSPT 415
Query: 284 I 286
+
Sbjct: 416 L 416
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 110 ISVGPALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPAIV 289
I V P L + + I V P+L I V P+L + I V P L I P++
Sbjct: 371 IRVSPCLAMSSQTIGVSPSLAMPSQTIGVSPSLAMPFHTIGVSPTLAHPSMAIRESPSLA 430
Query: 290 E 292
+
Sbjct: 431 Q 431
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +2
Query: 104 EPISVGPALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPA 283
+ I V P+L + I V P L + I P+L + P+L + V P+
Sbjct: 395 QTIGVSPSLAMPFHTIGVSPTLAHPSMAIRESPSLAQPPQSTGESPSLTWPSQATGVSPS 454
Query: 284 IV-EGAPVTVTGLMALPSSRS 343
+ + V+ +A PS S
Sbjct: 455 VAHQSVASRVSSSLAQPSQAS 475
Score = 31.1 bits (67), Expect = 3.9
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = +2
Query: 122 PALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPAIVEGAP 301
P+L +P V P+ V P+L +Y+ V P+ + V P+ G P
Sbjct: 284 PSLAQPSQPTEVSPSSAYPSVVTGESPSLAQSYQRTEVFPSPAYPFMATEVSPS--PGDP 341
Query: 302 VTVTGLMALPSSRSSST 352
VTG P+ S T
Sbjct: 342 SVVTGESPSPAYPSQPT 358
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +2
Query: 101 YEPISVG--PALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISV 274
Y SVG P L ++P V P+ I P L ++P V P+ Y+ V
Sbjct: 80 YPSQSVGEYPMLAQPFQPTEVSPSPTYPSQAIREYPTLAQPFQPTEVSPSPAHPYQLTEV 139
Query: 275 GPA 283
P+
Sbjct: 140 SPS 142
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +2
Query: 122 PALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGP 241
P L ++P V P+ Y V P+ +Y+P V P
Sbjct: 115 PTLAQPFQPTEVSPSPAHPYQLTEVSPSAAYSYQPTEVSP 154
>BC126219-1|AAI26220.1| 917|Homo sapiens scaffold attachment factor
B protein.
Length = 917
Score = 31.1 bits (67), Expect = 3.9
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -2
Query: 382 DQRQSRKDGSR***SGRGECHQPGDSHRGTFNNGRSNRDGL--VGVNKSRSDGDGLVGVN 209
D R++GSR R H P + H G +GR +RDG G +K S+G GL
Sbjct: 759 DHSVDRREGSRSMMGEREGQHYP-ERHGGPERHGRDSRDGWGGYGSDKRMSEGRGLPPPP 817
Query: 208 KSRSNRDGH 182
+ R + H
Sbjct: 818 RGRRDWGDH 826
>U72355-1|AAC00056.1| 915|Homo sapiens Hsp27 ERE-TATA-binding
protein protein.
Length = 915
Score = 30.3 bits (65), Expect = 6.8
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 382 DQRQSRKDGSR***SGRGECHQPGDSHRGTFNNGRSNRDGL--VGVNKSRSDGDGL 221
D R++GSR R H P + H G +GR +RDG G +K S+G GL
Sbjct: 759 DHSVDRREGSRSMMGEREGQHYP-ERHGGPERHGRDSRDGWGGYGSDKRMSEGRGL 813
>L43631-1|AAC18697.1| 864|Homo sapiens scaffold attachment factor B
protein.
Length = 864
Score = 30.3 bits (65), Expect = 6.8
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 382 DQRQSRKDGSR***SGRGECHQPGDSHRGTFNNGRSNRDGL--VGVNKSRSDGDGL 221
D R++GSR R H P + H G +GR +RDG G +K S+G GL
Sbjct: 708 DHSVDRREGSRSMMGEREGQHYP-ERHGGPERHGRDSRDGWGGYGSDKRMSEGRGL 762
>AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 369 LGRTVHVDDDLDEGSAISPVTVTGAPSTMAGPTEMGS 259
LGR DD S PVT TGA ++A P ++GS
Sbjct: 1414 LGRRDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGS 1450
>AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 369 LGRTVHVDDDLDEGSAISPVTVTGAPSTMAGPTEMGS 259
LGR DD S PVT TGA ++A P ++GS
Sbjct: 1414 LGRRDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGS 1450
>AK127825-1|BAC87149.1| 207|Homo sapiens PROTEIN). protein.
Length = 207
Score = 30.3 bits (65), Expect = 6.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 118 WTCSC*HLRTHLCW---TCSC*HLRAHLCWTCSC*HLRAHLR 234
W C+C ++ +H+C C C L ++C C C +R H+R
Sbjct: 125 WVCACTYVCSHVCMCGCVCMCMCLYVYMC-MCVC--VRVHVR 163
>AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein.
Length = 836
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 369 LGRTVHVDDDLDEGSAISPVTVTGAPSTMAGPTEMGS 259
LGR DD S PVT TGA ++A P ++GS
Sbjct: 598 LGRRDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGS 634
>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 29.9 bits (64), Expect = 9.0
Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 1/154 (0%)
Frame = -3
Query: 570 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLN 391
G G S S G+N+ FG+ R G ++ F +YGSG + G FG +
Sbjct: 1080 GSGSSQSSGYGQHGSNSGQTSGFGQHRPG---SGQSSGFGQYGSGSGQSSG---FGQ--H 1131
Query: 390 INGISGNLGRTVHVDDDLDEGSAISPVTVTG-APSTMAGPTEMGS*VSTRAGPTEMGS*V 214
+G + G H + G + TG + S+ G E GS +T G GS
Sbjct: 1132 GSGTGKSSGFAQH---EYRSGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDN 1188
Query: 213 STRAGPTEMGT*VSTRAGPTEMGS*VSTRAGPTE 112
+ +G + ST G GS ST G E
Sbjct: 1189 FSSSGQHISDSGQSTGFGQYGSGSGQSTGLGQGE 1222
>BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein
LOC339344 protein.
Length = 399
Score = 29.9 bits (64), Expect = 9.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 239 PALVDTYEPISVGPAIVEGAPVTVTGLMALPSSRSSS 349
P + T EP+SV A+V+GA V G++ P S +
Sbjct: 329 PKVEITPEPVSVVAAVVDGAVVAARGVIIAPRSEEGA 365
>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
Length = 2391
Score = 29.9 bits (64), Expect = 9.0
Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 1/154 (0%)
Frame = -3
Query: 570 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLN 391
G G S S G+N+ FG+ R G ++ F +YGSG + G FG +
Sbjct: 1080 GSGSSQSSGYGQHGSNSGQTSGFGQHRPG---SGQSSGFGQYGSGSGQSSG---FGQ--H 1131
Query: 390 INGISGNLGRTVHVDDDLDEGSAISPVTVTG-APSTMAGPTEMGS*VSTRAGPTEMGS*V 214
+G + G H + G + TG + S+ G E GS +T G GS
Sbjct: 1132 GSGTGKSSGFAQH---EYRSGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDN 1188
Query: 213 STRAGPTEMGT*VSTRAGPTEMGS*VSTRAGPTE 112
+ +G + ST G GS ST G E
Sbjct: 1189 FSSSGQHISDSGQSTGFGQYGSGSGQSTGLGQGE 1222
>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 29.9 bits (64), Expect = 9.0
Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 1/154 (0%)
Frame = -3
Query: 570 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLN 391
G G S S G+N+ FG+ R G ++ F +YGSG + G FG +
Sbjct: 1080 GSGSSQSSGYGQHGSNSGQTSGFGQHRPG---SGQSSGFGQYGSGSGQSSG---FGQ--H 1131
Query: 390 INGISGNLGRTVHVDDDLDEGSAISPVTVTG-APSTMAGPTEMGS*VSTRAGPTEMGS*V 214
+G + G H + G + TG + S+ G E GS +T G GS
Sbjct: 1132 GSGTGKSSGFAQH---EYRSGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDN 1188
Query: 213 STRAGPTEMGT*VSTRAGPTEMGS*VSTRAGPTE 112
+ +G + ST G GS ST G E
Sbjct: 1189 FSSSGQHISDSGQSTGFGQYGSGSGQSTGLGQGE 1222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,308,691
Number of Sequences: 237096
Number of extensions: 2004875
Number of successful extensions: 4884
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4855
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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