BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1k23
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033864-1|AAH33864.1| 320|Homo sapiens BCAT1 protein protein. 198 2e-50
AK056255-1|BAB71129.1| 386|Homo sapiens protein ( Homo sapiens ... 198 2e-50
U21551-1|AAB08528.1| 384|Homo sapiens ECA39 protein. 196 8e-50
U68418-1|AAB67672.1| 392|Homo sapiens branched chain aminotrans... 180 3e-45
BC004243-1|AAH04243.2| 379|Homo sapiens BCAT2 protein protein. 180 4e-45
BC001900-1|AAH01900.1| 392|Homo sapiens branched chain aminotra... 180 4e-45
AF268047-1|AAK38368.1| 392|Homo sapiens placental protein 18a p... 180 4e-45
AK223522-1|BAD97242.1| 392|Homo sapiens branched chain aminotra... 180 6e-45
U62739-1|AAB53087.1| 352|Homo sapiens branched-chain amino acid... 171 1e-42
AF268048-1|AAK38369.1| 300|Homo sapiens placental protein 18b p... 116 1e-25
BC067812-1|AAH67812.1| 526|Homo sapiens cyclin L1 protein. 31 5.0
BC007081-1|AAH07081.1| 526|Homo sapiens cyclin L1 protein. 31 5.0
AY358663-1|AAQ89026.1| 299|Homo sapiens CCNL1 protein. 31 5.0
AF180920-1|AAD53184.1| 526|Homo sapiens cyclin L ania-6a protein. 31 5.0
>BC033864-1|AAH33864.1| 320|Homo sapiens BCAT1 protein protein.
Length = 320
Score = 198 bits (482), Expect = 2e-50
Identities = 92/164 (56%), Positives = 123/164 (75%)
Frame = +3
Query: 192 SFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLN 371
+FK +DL V A L KP+ L FG FTDHML + + E G W+KP I P +NL+
Sbjct: 23 TFKAKDLIVTPATI--LKEKPDPNNLVFGTVFTDHMLTVEWSSEFG-WEKPHIKPLQNLS 79
Query: 372 IHPAAKALHYAIQLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQC 551
+HP + ALHYA++LFEGLKA+RGVD+KIRLF+P LNM+RM +A R+ LP+FD EEL++C
Sbjct: 80 LHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLEC 139
Query: 552 IKRLVQIDQEWVPHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
I++LV++DQEWVP+S +++LYIRPT IG EP+ G+ P ALLF
Sbjct: 140 IQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLF 183
>AK056255-1|BAB71129.1| 386|Homo sapiens protein ( Homo sapiens
cDNA FLJ31693 fis, clone NT2RI2005710, highly similar to
BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, CYTOSOLIC
(EC ).
Length = 386
Score = 198 bits (482), Expect = 2e-50
Identities = 92/164 (56%), Positives = 123/164 (75%)
Frame = +3
Query: 192 SFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLN 371
+FK +DL V A L KP+ L FG FTDHML + + E G W+KP I P +NL+
Sbjct: 24 TFKAKDLIVTPATI--LKEKPDPNNLVFGTVFTDHMLTVEWSSEFG-WEKPHIKPLQNLS 80
Query: 372 IHPAAKALHYAIQLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQC 551
+HP + ALHYA++LFEGLKA+RGVD+KIRLF+P LNM+RM +A R+ LP+FD EEL++C
Sbjct: 81 LHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLEC 140
Query: 552 IKRLVQIDQEWVPHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
I++LV++DQEWVP+S +++LYIRPT IG EP+ G+ P ALLF
Sbjct: 141 IQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLF 184
>U21551-1|AAB08528.1| 384|Homo sapiens ECA39 protein.
Length = 384
Score = 196 bits (477), Expect = 8e-50
Identities = 91/164 (55%), Positives = 122/164 (74%)
Frame = +3
Query: 192 SFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLN 371
+FK +DL V A L KP+ L FG FTDHML + + E G W+KP I P +NL+
Sbjct: 22 TFKAKDLIVTPATI--LKEKPDPNNLVFGTVFTDHMLTVEWSSEFG-WEKPHIKPLQNLS 78
Query: 372 IHPAAKALHYAIQLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQC 551
+HP + ALHYA++LFEGLKA+RGVD+KIRLF+P LNM+RM +A R+ LP+FD EEL++C
Sbjct: 79 LHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLEC 138
Query: 552 IKRLVQIDQEWVPHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
I++LV++DQEWVP+S +++LYIRP IG EP+ G+ P ALLF
Sbjct: 139 IQQLVKLDQEWVPYSTSASLYIRPAFIGTEPSLGVKKPTKALLF 182
>U68418-1|AAB67672.1| 392|Homo sapiens branched chain
aminotransferase precursor protein.
Length = 392
Score = 180 bits (439), Expect = 3e-45
Identities = 82/164 (50%), Positives = 117/164 (71%)
Frame = +3
Query: 192 SFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLN 371
SFK DLQ+ + P P + L FGK FTDHML + ++ + GW +P I PF+NL
Sbjct: 31 SFKAADLQLEMTQKPHKKPGP-GEPLVFGKTFTDHMLMVEWNDK--GWGQPRIQPFQNLT 87
Query: 372 IHPAAKALHYAIQLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQC 551
+HPA+ +LHY++QLFEG+KA++G D ++RLFRP LNM+RM +A R LP FD EL++C
Sbjct: 88 LHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLEC 147
Query: 552 IKRLVQIDQEWVPHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
I+RL+++D++WVP + ++LY+RP LIG EP+ G+ P ALLF
Sbjct: 148 IRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLF 191
>BC004243-1|AAH04243.2| 379|Homo sapiens BCAT2 protein protein.
Length = 379
Score = 180 bits (438), Expect = 4e-45
Identities = 82/164 (50%), Positives = 117/164 (71%)
Frame = +3
Query: 192 SFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLN 371
SFK DLQ+ + P P + L FGK FTDHML + ++ + GW +P I PF+NL
Sbjct: 18 SFKAADLQLEMTQKPHKKPGP-GEPLVFGKTFTDHMLMVEWNDK--GWGQPRIQPFQNLT 74
Query: 372 IHPAAKALHYAIQLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQC 551
+HPA+ +LHY++QLFEG+KA++G D ++RLFRP LNM+RM +A R LP FD EL++C
Sbjct: 75 LHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLEC 134
Query: 552 IKRLVQIDQEWVPHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
I+RL+++D++WVP + ++LY+RP LIG EP+ G+ P ALLF
Sbjct: 135 IRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRALLF 178
>BC001900-1|AAH01900.1| 392|Homo sapiens branched chain
aminotransferase 2, mitochondrial protein.
Length = 392
Score = 180 bits (438), Expect = 4e-45
Identities = 82/164 (50%), Positives = 117/164 (71%)
Frame = +3
Query: 192 SFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLN 371
SFK DLQ+ + P P + L FGK FTDHML + ++ + GW +P I PF+NL
Sbjct: 31 SFKAADLQLEMTQKPHKKPGP-GEPLVFGKTFTDHMLMVEWNDK--GWGQPRIQPFQNLT 87
Query: 372 IHPAAKALHYAIQLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQC 551
+HPA+ +LHY++QLFEG+KA++G D ++RLFRP LNM+RM +A R LP FD EL++C
Sbjct: 88 LHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLEC 147
Query: 552 IKRLVQIDQEWVPHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
I+RL+++D++WVP + ++LY+RP LIG EP+ G+ P ALLF
Sbjct: 148 IRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRALLF 191
>AF268047-1|AAK38368.1| 392|Homo sapiens placental protein 18a
precursor protein.
Length = 392
Score = 180 bits (438), Expect = 4e-45
Identities = 82/164 (50%), Positives = 117/164 (71%)
Frame = +3
Query: 192 SFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLN 371
SFK DLQ+ + P P + L FGK FTDHML + ++ + GW +P I PF+NL
Sbjct: 31 SFKAADLQLEMTQKPHKKPGP-GEPLVFGKTFTDHMLMVEWNDK--GWGQPRIQPFQNLT 87
Query: 372 IHPAAKALHYAIQLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQC 551
+HPA+ +LHY++QLFEG+KA++G D ++RLFRP LNM+RM +A R LP FD EL++C
Sbjct: 88 LHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLEC 147
Query: 552 IKRLVQIDQEWVPHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
I+RL+++D++WVP + ++LY+RP LIG EP+ G+ P ALLF
Sbjct: 148 IRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRALLF 191
>AK223522-1|BAD97242.1| 392|Homo sapiens branched chain
aminotransferase 2, mitochondrial variant protein.
Length = 392
Score = 180 bits (437), Expect = 6e-45
Identities = 82/164 (50%), Positives = 116/164 (70%)
Frame = +3
Query: 192 SFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLN 371
SFK DLQ+ + P P + L FGK FTDHML + ++ GW +P I PF+NL
Sbjct: 31 SFKAADLQLEMTQKPHKKPGP-GEPLVFGKTFTDHMLMVEWNDN--GWGQPRIQPFQNLT 87
Query: 372 IHPAAKALHYAIQLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQC 551
+HPA+ +LHY++QLFEG+KA++G D ++RLFRP LNM+RM +A R LP FD EL++C
Sbjct: 88 LHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLEC 147
Query: 552 IKRLVQIDQEWVPHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
I+RL+++D++WVP + ++LY+RP LIG EP+ G+ P ALLF
Sbjct: 148 IRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRALLF 191
>U62739-1|AAB53087.1| 352|Homo sapiens branched-chain amino acid
aminotransferase protein.
Length = 352
Score = 171 bits (417), Expect = 1e-42
Identities = 78/153 (50%), Positives = 111/153 (72%), Gaps = 5/153 (3%)
Frame = +3
Query: 240 LTPKPEAKE-----LGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLNIHPAAKALHYA 404
+T KP K L FGK FTDHML + ++ + GW +P I PF+NL +HPA+ +LHY+
Sbjct: 1 MTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDK--GWGQPRIQPFQNLTLHPASSSLHYS 58
Query: 405 IQLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQCIKRLVQIDQEW 584
+QLFEG+KA++G D ++RLFRP LNM+RM +A R LP FD EL++CI+RL+++D++W
Sbjct: 59 LQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIELDKDW 118
Query: 585 VPHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
VP + ++LY+RP LIG EP+ G+ P ALLF
Sbjct: 119 VPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLF 151
>AF268048-1|AAK38369.1| 300|Homo sapiens placental protein 18b
protein.
Length = 300
Score = 116 bits (278), Expect = 1e-25
Identities = 50/92 (54%), Positives = 71/92 (77%)
Frame = +3
Query: 408 QLFEGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQCIKRLVQIDQEWV 587
QLFEG+KA++G D ++RLFRP LNM+RM +A R LP FD EL++CI+RL+++D++WV
Sbjct: 8 QLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWV 67
Query: 588 PHSETSTLYIRPTLIGIEPTFGIMAPESALLF 683
P + ++LY+RP LIG EP+ G+ P ALLF
Sbjct: 68 PDAAGTSLYVRPVLIGNEPSLGVSQPTRALLF 99
>BC067812-1|AAH67812.1| 526|Homo sapiens cyclin L1 protein.
Length = 526
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 28 ARSW*NGYSRTNTSCRLFDGVALRCGTKS*KTQCRRTTWHHRPRKSHTH-KLHLKSPSST 204
+RS SR++T R ++ R GT S +++ R + PR+ H H HLK+ +
Sbjct: 395 SRSRTRSRSRSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTR 454
Query: 205 KTCKYDSR 228
K +R
Sbjct: 455 DDLKSSNR 462
>BC007081-1|AAH07081.1| 526|Homo sapiens cyclin L1 protein.
Length = 526
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 28 ARSW*NGYSRTNTSCRLFDGVALRCGTKS*KTQCRRTTWHHRPRKSHTH-KLHLKSPSST 204
+RS SR++T R ++ R GT S +++ R + PR+ H H HLK+ +
Sbjct: 395 SRSRTRSRSRSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTR 454
Query: 205 KTCKYDSR 228
K +R
Sbjct: 455 DDLKSSNR 462
>AY358663-1|AAQ89026.1| 299|Homo sapiens CCNL1 protein.
Length = 299
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 28 ARSW*NGYSRTNTSCRLFDGVALRCGTKS*KTQCRRTTWHHRPRKSHTH-KLHLKSPSST 204
+RS SR++T R ++ R GT S +++ R + PR+ H H HLK+ +
Sbjct: 168 SRSRTRSRSRSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTR 227
Query: 205 KTCKYDSR 228
K +R
Sbjct: 228 DDLKSSNR 235
>AF180920-1|AAD53184.1| 526|Homo sapiens cyclin L ania-6a protein.
Length = 526
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 28 ARSW*NGYSRTNTSCRLFDGVALRCGTKS*KTQCRRTTWHHRPRKSHTH-KLHLKSPSST 204
+RS SR++T R ++ R GT S +++ R + PR+ H H HLK+ +
Sbjct: 395 SRSRTRSRSRSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTR 454
Query: 205 KTCKYDSR 228
K +R
Sbjct: 455 DDLKSSNR 462
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,764,128
Number of Sequences: 237096
Number of extensions: 2649097
Number of successful extensions: 10822
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10808
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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