Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1k16
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 71 2e-13
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 62 1e-10
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 58 1e-09
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 50 3e-07
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 50 3e-07
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 47 3e-06
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 40 4e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 0.001
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 39 0.001
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 38 0.002
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 35 0.011
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 31 0.24
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 30 0.32
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.74
SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 3.0
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 27 3.0
SPAC22A12.16 |||ATP-citrate synthase subunit 2 |Schizosaccharomy... 26 6.9
SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase comp... 26 6.9
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 25 9.1
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 25 9.1
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 70.5 bits (165), Expect = 2e-13
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Frame = +3
Query: 321 GKSNAADAVVKEIKDKGGVAVADYNSVVEGEK-LIKT---AIDNFG-RIDILINNAGI-L 482
G++ A E++DK GV Y+ +E +I+T A++ G R+D++I NAGI +
Sbjct: 41 GRNKKALEYAAELRDKHGVQAKAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIAI 100
Query: 483 RDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQ-- 656
S E W + ++L GA+ T AA F+KQ G ++ T+S +G N+ Q
Sbjct: 101 PHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQW 160
Query: 657 ANYSAAKLGLVGLANTLAI 713
A+Y A K + LA LA+
Sbjct: 161 ASYHATKAAVKHLARALAV 179
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 61.7 bits (143), Expect = 1e-10
Identities = 36/120 (30%), Positives = 56/120 (46%)
Frame = +3
Query: 354 EIKDKGGVAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQ 533
+++D AD + + E I+ I G ID+LINNAG+ D F +++ + WD
Sbjct: 42 KVQDAALALQADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDV 101
Query: 534 AVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQANYSAAKLGLVGLANTLAI 713
++ L+G + T KQ G ++ + G YSAAK GL L LA+
Sbjct: 102 SLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYLGSPAYSAAKAGLENLTKALAV 161
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 58.4 bits (135), Expect = 1e-09
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +3
Query: 441 FGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMT 620
F IDI++ N GI KS MT +++ V+L G F H A F+KQ +G +V T
Sbjct: 96 FDTIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVAT 155
Query: 621 SSNAGLFGNFGQAN--YSAAKLGLVGLANTLAIGRRK 725
+S +G+ N Q Y+ +K G++ L +LA+ RK
Sbjct: 156 ASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWRK 192
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 50.4 bits (115), Expect = 3e-07
Identities = 34/111 (30%), Positives = 49/111 (44%)
Frame = +3
Query: 375 VAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGA 554
V D N+ +K ++ AI +FGRID+L+NNAG TE+ I ++ GA
Sbjct: 18 VTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGA 77
Query: 555 FKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQANYSAAKLGLVGLANTL 707
+ A FR Q G I+ SS G Y K + G++ L
Sbjct: 78 LEVIKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEAL 128
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 50.4 bits (115), Expect = 3e-07
Identities = 34/111 (30%), Positives = 49/111 (44%)
Frame = +3
Query: 375 VAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGA 554
V D N+ +K ++ AI +FGRID+L+NNAG TE+ I ++ GA
Sbjct: 18 VTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGA 77
Query: 555 FKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQANYSAAKLGLVGLANTL 707
+ A FR Q G I+ SS G Y K + G++ L
Sbjct: 78 LEVIKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEAL 128
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 46.8 bits (106), Expect = 3e-06
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +3
Query: 387 DYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTT 566
D V E K A FG +DI+INNAG F ++ V+ G T
Sbjct: 55 DVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYIT 114
Query: 567 HAAWETFRKQ-KYGRIVMTSSNAGLFGNFGQANYSAAKLGLVGLANTL 707
A R+ K GRI+ SS AG + + + Y+A+K + GL+ T+
Sbjct: 115 KEALNLMRESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTI 162
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 39.9 bits (89), Expect = 4e-04
Identities = 25/127 (19%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Frame = +3
Query: 351 KEIKDKGGVAVADYNSVVEGEKLIKTAIDN----FGRIDILINNAGILRDKSFTKMTEQD 518
K++ ++ GV V + ++ ++ F I +++ NAG+ +S +
Sbjct: 62 KKLAEETGVQVHTLKIDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHE 121
Query: 519 WDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQ--ANYSAAKLGLVG 692
++ + ++ ++ + + F+KQ +G ++ T+S + N Q A Y A+K +
Sbjct: 122 FEKVMNINTNSVYRVAYYMGKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAVRQ 181
Query: 693 LANTLAI 713
L LA+
Sbjct: 182 LCKALAV 188
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 38.7 bits (86), Expect = 0.001
Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 5/135 (3%)
Frame = +3
Query: 318 AGKSNAADAVVKEIKDKGGVAVADYNSVVEGEKLIKTAIDN----FGRIDILINNAGI-L 482
A + + + + KE++ K V+V V K I I++ F ID+LINNAG+ L
Sbjct: 38 ARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLAL 97
Query: 483 RDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQAN 662
+ D + ++ G T A F + G I+ S AG G +
Sbjct: 98 GTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSV 157
Query: 663 YSAAKLGLVGLANTL 707
Y + K L + L
Sbjct: 158 YCSTKSALAQFTSAL 172
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +3
Query: 408 GEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQD---WDLIQAVHLKGAFKTTHAAW 578
G+ I+TAI FG++D +I NAG+L + K+ + D W + ++ +T A
Sbjct: 65 GKASIETAIKKFGKLDSVILNAGVL--EPIAKIADADINEWRKLFDINFFSVVETVKYAI 122
Query: 579 ETFRKQKYGRIVMTSSNAGL 638
RK K G IV+ SS A +
Sbjct: 123 PHLRKTK-GTIVIVSSGAAV 141
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 37.5 bits (83), Expect = 0.002
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +3
Query: 381 VADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDK-SFTKMTEQDWDLIQAVHLKGAF 557
V S E + + A+D ID+L N+GI + + + E+ W+ ++ G
Sbjct: 63 VTSQQSANEAAQSVAKAVDG---IDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPI 119
Query: 558 KTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQANYSA 671
A + K+K +++ TSS G G+F +SA
Sbjct: 120 HVFKAFYPLLTKKKTRQVIFTSSECGSMGDFRATGFSA 157
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 35.1 bits (77), Expect = 0.011
Identities = 37/139 (26%), Positives = 59/139 (42%)
Frame = +3
Query: 297 LGSARDGAGKSNAADAVVKEIKDKGGVAVADYNSVVEGEKLIKTAIDNFGRIDILINNAG 476
L +AR N A ++ +K + V D +SV E E+ ++ + G + LINNAG
Sbjct: 33 LATARQVERMDNLTKAGLQTLK----LDVTDEDSVREVEQEVRKFTN--GSLHYLINNAG 86
Query: 477 ILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQ 656
+ +D + V+ G + A + K G IV +S
Sbjct: 87 APCSAPAIDLDIEDVSKVMDVNFYGVIRMNKAFQHQLIRAK-GTIVNVNSLVSYVPFAFN 145
Query: 657 ANYSAAKLGLVGLANTLAI 713
A Y+A+K L+ +NTL I
Sbjct: 146 AAYNASKAALLAYSNTLRI 164
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 30.7 bits (66), Expect = 0.24
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 450 IDILINNAGILRD-KSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSS 626
ID+L N+GI + + K +++ W ++ G A + ++ K IV TSS
Sbjct: 84 IDVLWVNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHVYQAFYHLLKEGKLKNIVFTSS 143
Query: 627 NAGLFGNFGQANYSA 671
A G YSA
Sbjct: 144 MAACMGGVRPNTYSA 158
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 30.3 bits (65), Expect = 0.32
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +3
Query: 417 LIKTAIDNFGRIDILINNAGILR-DKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRK 593
L+ A+ G ID+L+NN + +S + ++ WDL ++ F T AA +
Sbjct: 111 LVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHMKS 170
Query: 594 QKYGRIVMTSSNAGLFGNFGQANYSAAKLGLVGLANTLA 710
IV SS G +Y++ K + L+
Sbjct: 171 G--SSIVNCSSINAYVGRPDLLDYTSTKGAITAFTRGLS 207
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.74
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = -3
Query: 454 SILPKLSIAVFISFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTTTLA 275
S+LP S++ S ++T SA++T PLS ++ TTA++A P S+ + + +
Sbjct: 413 SVLPTSSVSSTPLSSANSTTATSASST-PLSSVNSTTATSASSTPLSSVNSTTATSASST 471
Query: 274 P 272
P
Sbjct: 472 P 472
Score = 27.1 bits (57), Expect = 3.0
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -3
Query: 454 SILPKLSIAVFISFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTTT 281
S+LP + + S ++T SA++TP S+ S TT SA+ P S++ S T T
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSAS-STPLSSVSSANSTTAT 336
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = -3
Query: 454 SILPKLSIAVFISFSPSTTEL*SATATPPLSLISLTTASAALDFP 320
S+LP S++ S ++T SA++T PL+ ++ TTA++A P
Sbjct: 527 SVLPTSSVSSTPLSSANSTTATSASST-PLTSVNSTTATSASSTP 570
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = -3
Query: 421 ISFSPSTTEL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTTTLAP 272
+S + STT ++T++ PLS ++ TTA++A P S+ + + + P
Sbjct: 327 VSSANSTTA--TSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTP 374
>SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 418
Score = 27.1 bits (57), Expect = 3.0
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -3
Query: 547 FKWTAWIKSQSCSVILVKLLSRRMPALLIRISILPKLSIAVFISFSPSTTEL*SATATPP 368
F+W +W+ SQ S L S + + + P + +F +FS +T L SA P
Sbjct: 317 FEWGSWVSSQDTSKNSSNLASASVDDVSEESQVEP--NTLIFQNFSSPSTSL-SAPKDTP 373
Query: 367 LSLISLTTA 341
+ S+ T+
Sbjct: 374 AVIQSINTS 382
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 27.1 bits (57), Expect = 3.0
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3
Query: 562 VLKAPFKWTAWIK 524
VLKAPF W+AW++
Sbjct: 200 VLKAPFFWSAWLE 212
>SPAC22A12.16 |||ATP-citrate synthase subunit 2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 442 KLSIAVFISFSPSTT--EL*SATATPPLSLISLTTASAALDFPAPSLALPRSLTT 284
K +A +++ SPS + E + +ATP + L A + FP P+L +P TT
Sbjct: 12 KAVLAYWLNRSPSISKEEYKTVSATPAVQL-------AQIQFPLPTLVIPAESTT 59
>SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase complex
II subunit Rpb7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 576 WETFRKQKYGRIVMTSSNAGLFGNFGQAN 662
W FR + IV T + G F N G N
Sbjct: 80 WRPFRGEVVDAIVTTVNKMGFFANIGPLN 108
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 25.4 bits (53), Expect = 9.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 110 YRFSLSASIVNYKLIISFLYIAEDGSIAFRRTCSSSN 220
YR L +S+ + I+ F+Y+A +RT S N
Sbjct: 102 YRDILRSSLEHRPAILRFIYLAASRETLIKRTTSRKN 138
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.4 bits (53), Expect = 9.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 418 SFSPSTTEL*SATATPPLSLISLTTASAALDFPA 317
S S S + S+++TP +S I TT+S + D P+
Sbjct: 114 SNSSSLPSIPSSSSTPSISSIPHTTSSVSNDIPS 147
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,940,351
Number of Sequences: 5004
Number of extensions: 55442
Number of successful extensions: 169
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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