Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1k13
(760 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 40 5e-04
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 34 0.019
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 33 0.033
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 32 0.10
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.72
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 29 0.72
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha... 29 0.95
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 28 1.3
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 28 1.7
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 27 2.2
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.8
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 26 5.1
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 26 5.1
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 26 5.1
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 26 6.7
SPCC965.11c |||amino acid transporter |Schizosaccharomyces pombe... 25 8.9
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 8.9
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 39.5 bits (88), Expect = 5e-04
Identities = 29/120 (24%), Positives = 54/120 (45%)
Frame = +2
Query: 5 SFYIEISWLHMEYRPWRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSI 184
++ I+ ++ H+ + WR ++ + +P + +L ESP+ L+ ++++ +A +TL I
Sbjct: 232 AYGIDTAFEHV-HNGWRWMVGLAMVPAAFQLFILIWLPESPRLLVKKERSQEAYNTLARI 290
Query: 185 YRWNTGRKPYTYPVSSVYLDEEPVLMENSSFFRKMWDQTAPLFKPPLLKNSLMLYYILMC 364
Y PY + +YL +E V F W + FK S IL C
Sbjct: 291 Y---PTAHPYEIK-TKLYLIQEGV---RDPFSGSRWQKIVKTFKELYFNPSNFRALILAC 343
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 34.3 bits (75), Expect = 0.019
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +2
Query: 50 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTL 175
WR+ M I + G+I I ++FL ESP++L++ + +ALD +
Sbjct: 178 WRVSMGINLLWGIIMFIGISFLPESPRYLIAIGKDEEALDIM 219
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 33.5 bits (73), Expect = 0.033
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 50 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTL 175
WR+ M I + G+I I ++FL ESP++L+S + +AL +
Sbjct: 178 WRVSMGINLLWGIITFIGISFLPESPRYLISVGRDEEALQIM 219
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.9 bits (69), Expect = 0.10
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = +2
Query: 50 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTL 175
WR+ + I + G+I + ++FL+ESP++L+S + +A+ +
Sbjct: 178 WRVSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVM 219
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.1 bits (62), Expect = 0.72
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 50 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTL 175
WR+ + I + G+I I + FL ESP++L+ + +A+ L
Sbjct: 182 WRVSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVL 223
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 29.1 bits (62), Expect = 0.72
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 50 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKAL 166
WR+ + I + G+I + + FL ESP++L++ + +AL
Sbjct: 148 WRISIGINLLWGIITLVGIIFLPESPRYLIAIGKDDEAL 186
>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
alpha-glucosyltransferase Alg10|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 445
Score = 28.7 bits (61), Expect = 0.95
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 158 KALDTLKSIYRWNTGRKPYTYPVSSVYLDEEPVLMENSSFFRKMWDQTAPLFKPP 322
KA+ + I+ TG Y V + YLDE + + F RK WD + PP
Sbjct: 5 KAIILILWIFLAFTGLLAIQYYVPNPYLDEIFHIAQAQRFCRKDWDWDPAITTPP 59
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 41 YRPWRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTLKSIY 187
++ WR++ I + P + I++ + ESP++LL + K L I+
Sbjct: 236 HQGWRIMFGIGAAPALGQLISLFWTPESPRYLLRHNHVEKVYKILSRIH 284
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 50 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKAL 166
WR I + G++ + + FL ESP++L+ + + +AL
Sbjct: 178 WRTSFGINMLWGILLMVGVLFLPESPRYLIYKGRDEEAL 216
Score = 27.1 bits (57), Expect = 2.9
Identities = 8/30 (26%), Positives = 21/30 (70%)
Frame = -2
Query: 540 AYSVIGWIMLSQSFKVEFVAEAALLATSQN 451
++ +GW+++ ++F + + ++ A +ATS N
Sbjct: 382 SWGPMGWVIVGETFPIRYRSKCASVATSGN 411
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 27.5 bits (58), Expect = 2.2
Identities = 8/30 (26%), Positives = 21/30 (70%)
Frame = -2
Query: 540 AYSVIGWIMLSQSFKVEFVAEAALLATSQN 451
++ +GW+++ ++F + + ++ A +ATS N
Sbjct: 382 SWGPMGWVIVGETFPIRYRSKCAAVATSGN 411
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 50 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKAL 166
WR I + G+ + + FL ESP++L+ + + +AL
Sbjct: 178 WRTSFGINILWGIFLMVGVLFLPESPRYLIYKGRDEEAL 216
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 3.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 523 TNDAIRSHVLLGSVDRILSSPVLRRRTFREK---VDHAPSVCRSSILRGSTPVRQDTNAQ 693
++ AI S ++ S I SS VL T ++ + + SSIL STP+ T
Sbjct: 3092 SSTAITSSSIVNSSTPITSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSSTVVN 3151
Query: 694 YSTVLLIS 717
ST + S
Sbjct: 3152 SSTPITSS 3159
Score = 25.4 bits (53), Expect = 8.9
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 523 TNDAIRSHVLLGSVDRILSSPVLRRRT---FREKVDHAPSVCRSSILRGSTPVRQDTNAQ 693
T+ I S +L S I SS L T ++ + ++ SSIL STPV +
Sbjct: 3308 TSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLN 3367
Query: 694 YSTVLLIS 717
ST + S
Sbjct: 3368 SSTPITSS 3375
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 126 GLSLRKAIAIVPITPG-ILMICISIRHGRYSMCNH 25
G+S K V + PG + +C R GRY++C H
Sbjct: 79 GVSSLKPGDPVAVEPGCVCRLCDYCRSGRYNLCPH 113
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2
Query: 239 LDEEPVLMENSSFFRKMWDQTAPLFKPPLLKN----SLMLYYILMCAYMTSTGYTMWVPT 406
LDE +L+ ++ +WD + P L N S+M ++ A++T+ ++ + P
Sbjct: 479 LDERNLLITSTGLSLSIWDISQGFMNPSLCVNLDFSSVMRKHLTPSAFITTASFSTYNPE 538
Query: 407 MTNA 418
+ A
Sbjct: 539 FSCA 542
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 50 WRMLMQIISIPGVIGTIAMAFLNESPKFLLSRDQTVKALDTL 175
WR+ + I + G++ M FL ESP++L + + + + L
Sbjct: 180 WRVPIGINLLWGILMFFGMLFLPESPRYLAVKGRNEECMKIL 221
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 25.8 bits (54), Expect = 6.7
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 481 CNELYFKRLR*HYPTNDAIRSHVLLGSVDRILSSPVLRRRTFREKVD---HAPSVCRSSI 651
C E + +RLR YPT R +L V ++S L++R +D PS S+
Sbjct: 68 CFETFLRRLRAQYPTWLKFRVPMLKNLVIDHIASRDLQKRVLNILIDLWHFNPSEIEKSL 127
Query: 652 LRGST 666
+ ST
Sbjct: 128 IHLST 132
>SPCC965.11c |||amino acid transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 165 WILLNPFIDGILAENHILIQSVVFIWTKSRF*WKT 269
W + PF G + +IL+ IW +F KT
Sbjct: 456 WTVFKPFAAGDFVDAYILLPLFFVIWLSYKFIKKT 490
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 675 TNRSRTPQNAAAANTRSVVNFFPKGPTAKDRRTEDTVDTPE*H 547
T+ TP+ A++ + N PKGPT +T +P H
Sbjct: 136 TSNHSTPERTFASDAK---NHSPKGPTTTSFSRNETQSSPHSH 175
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,257,035
Number of Sequences: 5004
Number of extensions: 69259
Number of successful extensions: 216
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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