Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1j14
(724 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.55
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.96
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 2.9
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 2.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.9
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 6.7
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.55
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 266 PDSFYYVAIDLPGNG 310
P +FYY+ LPGNG
Sbjct: 410 PQNFYYIEEYLPGNG 424
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 0.96
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 305 NGRSDHLPPGVRYTVIDLVPA 367
N S+++ PG + V+DLVPA
Sbjct: 1507 NQVSNNVKPGGNFVVLDLVPA 1527
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 308 GRSDHLPPGVRYTVIDLVPAVIKVREHFKWDKFIYIGHSLGVPIGK 445
G+ + +P V V + + + W + IY G ++G P+ K
Sbjct: 607 GKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMGFPLDK 652
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 308 GRSDHLPPGVRYTVIDLVPAVIKVREHFKWDKFIYIGHSLGVPIGK 445
G+ + +P V V + + + W + IY G ++G P+ K
Sbjct: 607 GKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMGFPLDK 652
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 395 WDKFIYIGHSLGVPIG 442
W K IY+ G+P+G
Sbjct: 253 WTKVIYVKRFFGLPVG 268
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 395 WDKFIYIGHSLGVPIG 442
W K IY+ G+P+G
Sbjct: 253 WTKVIYVKRFFGLPVG 268
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 395 WDKFIYIGHSLGVPIG 442
W K IY+ G+P+G
Sbjct: 253 WTKVIYVKRFFGLPVG 268
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 402 LSHLKCSLTFITAGTRSITVYLTPGGR*SDLPFPGKS 292
L H++ FI GT S + ++P LP G+S
Sbjct: 1808 LKHIRAVSDFIYHGTSSTSSDISPMSEQKSLPRRGRS 1844
Score = 22.2 bits (45), Expect = 5.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 251 LVSLLPDSFYYVAIDLPGNGRSDHLPPG 334
+VS L + +Y+ L G+G+ LP G
Sbjct: 164 VVSWLQEPSFYIYPSLQGDGKFHLLPTG 191
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 402 LSHLKCSLTFITAGTRSITVYLTPGGR*SDLPFPGKS 292
L H++ FI GT S + ++P LP G+S
Sbjct: 1804 LKHIRAVSDFIYHGTSSTSSDISPMSEQKSLPRRGRS 1840
Score = 22.2 bits (45), Expect = 5.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 251 LVSLLPDSFYYVAIDLPGNGRSDHLPPG 334
+VS L + +Y+ L G+G+ LP G
Sbjct: 164 VVSWLQEPSFYIYPSLQGDGKFHLLPTG 191
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 707 PSRVHERTPLY*DLSPSSSA 648
P R H R DLSPSS A
Sbjct: 406 PKRFHSRAASKEDLSPSSLA 425
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 707 PSRVHERTPLY*DLSPSSSA 648
P R H R DLSPSS A
Sbjct: 406 PKRFHSRAASKEDLSPSSLA 425
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 2 IMMKYDLTRMYLYGAFKVLKDS 67
+++K D+TR YL + L+ S
Sbjct: 132 VLVKVDMTRQYLLQLIRNLRQS 153
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,610
Number of Sequences: 438
Number of extensions: 4901
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -