Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1j03
(464 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0202 - 1638978-1639571 36 0.021
06_01_0613 + 4439829-4439917,4440650-4440738,4441219-4441453,444... 36 0.021
03_06_0587 - 34921535-34922041,34922579-34922689 33 0.086
02_05_1020 - 33561454-33561568,33561839-33562070,33563286-335633... 33 0.086
02_01_0158 - 1103461-1104186 33 0.086
05_03_0201 - 9762563-9762843,9763037-9763919,9763988-9764036,980... 32 0.20
12_02_0371 - 18187169-18188386 32 0.26
10_02_0125 - 5537541-5538758 32 0.26
04_04_0086 - 22679233-22680450 32 0.26
05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-56... 31 0.46
02_04_0577 - 24011542-24011906,24012285-24012385,24013029-240132... 31 0.46
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921... 31 0.60
08_01_0688 - 6072815-6073918 31 0.60
07_01_1127 + 10456895-10457388,10457488-10458112 31 0.60
05_03_0545 - 15244647-15245147,15245342-15245635 31 0.60
04_02_0022 - 8645919-8646697,8646819-8646875,8653799-8654318 31 0.60
04_01_0252 - 3329712-3331061 31 0.60
09_02_0546 - 10454404-10455687 30 0.80
06_01_1059 + 8512335-8513444 30 1.1
02_02_0357 + 9360108-9360754,9363732-9364137 30 1.1
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 29 1.4
07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637 29 1.4
03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594 29 1.4
02_03_0327 + 17770766-17770819,17770913-17771380 29 1.4
10_02_0188 - 6473353-6473432,6473619-6474816 29 2.4
05_01_0553 + 4849535-4849553,4850727-4851913 28 3.2
02_05_0839 - 32113992-32114210,32114321-32114484,32114612-321147... 28 3.2
02_02_0741 + 13590883-13591582,13591955-13592250 28 4.3
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 27 5.6
12_02_0077 - 13288916-13289659,13289689-13289691 27 7.4
11_03_0149 + 10787332-10787454,10787776-10788529,10790406-107904... 27 7.4
10_06_0146 + 11230357-11230364,11230847-11230893,11231535-112316... 27 7.4
08_02_0701 + 20177860-20178603 27 7.4
03_02_1028 - 13444284-13445381 27 7.4
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 27 9.8
07_03_0964 - 22989470-22989618,22989729-22990476 27 9.8
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810... 27 9.8
01_01_0419 - 3146851-3147339,3148428-3148663,3148847-3149793,315... 27 9.8
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 27 9.8
>08_01_0202 - 1638978-1639571
Length = 197
Score = 35.5 bits (78), Expect = 0.021
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 398 SSVCYXCNRTGHFARECTQGG 460
S CY C GH AR+C+QGG
Sbjct: 134 SRACYKCGEEGHMARDCSQGG 154
Score = 30.7 bits (66), Expect = 0.60
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 407 CYXCNRTGHFAREC 448
CY C TGH AREC
Sbjct: 179 CYNCGETGHIAREC 192
>06_01_0613 +
4439829-4439917,4440650-4440738,4441219-4441453,
4441768-4441771,4441829-4441930
Length = 172
Score = 35.5 bits (78), Expect = 0.021
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFAREC 448
S S CY C TGHFAREC
Sbjct: 85 SESKCYECGETGHFAREC 102
>03_06_0587 - 34921535-34922041,34922579-34922689
Length = 205
Score = 33.5 bits (73), Expect = 0.086
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 407 CYXCNRTGHFARECTQG 457
CY C + GHFAREC G
Sbjct: 128 CYKCGKPGHFARECPSG 144
>02_05_1020 -
33561454-33561568,33561839-33562070,33563286-33563374,
33563856-33563944
Length = 174
Score = 33.5 bits (73), Expect = 0.086
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFAREC 448
S CY C TGHFAREC
Sbjct: 84 SEMKCYECGETGHFAREC 101
>02_01_0158 - 1103461-1104186
Length = 241
Score = 33.5 bits (73), Expect = 0.086
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 407 CYXCNRTGHFARECTQGG 460
CY C TGH AR+C GG
Sbjct: 193 CYNCGETGHLARDCYNGG 210
Score = 30.3 bits (65), Expect = 0.80
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 407 CYXCNRTGHFARECTQGG 460
C+ C +GH AR+C GG
Sbjct: 126 CFKCGESGHMARDCFNGG 143
Score = 27.5 bits (58), Expect = 5.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 407 CYXCNRTGHFAREC 448
CY C GH AR+C
Sbjct: 226 CYNCGEAGHIARDC 239
Score = 27.1 bits (57), Expect = 7.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 407 CYXCNRTGHFARECTQGG 460
C+ C GH AR+C G
Sbjct: 161 CFKCGEMGHMARDCFNSG 178
>05_03_0201 -
9762563-9762843,9763037-9763919,9763988-9764036,
9806710-9807680
Length = 727
Score = 32.3 bits (70), Expect = 0.20
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFARECTQ 454
+S +C+ C+ GH+AREC Q
Sbjct: 98 ASIICFMCDEQGHYARECPQ 117
>12_02_0371 - 18187169-18188386
Length = 405
Score = 31.9 bits (69), Expect = 0.26
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 389 AMSSSVCYXCNRTGHFARECTQ 454
A + +CY C GHF+R+C Q
Sbjct: 345 AKKTLICYNCKEPGHFSRDCPQ 366
>10_02_0125 - 5537541-5538758
Length = 405
Score = 31.9 bits (69), Expect = 0.26
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 389 AMSSSVCYXCNRTGHFARECTQ 454
A + +CY C GHF+R+C Q
Sbjct: 345 AKKTLICYNCKEPGHFSRDCPQ 366
>04_04_0086 - 22679233-22680450
Length = 405
Score = 31.9 bits (69), Expect = 0.26
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 389 AMSSSVCYXCNRTGHFARECTQ 454
A + +CY C GHF+R+C Q
Sbjct: 345 AKKTLICYNCKEPGHFSRDCPQ 366
>05_01_0084 +
562119-562411,562854-562902,563151-563162,563194-563327,
563716-566278
Length = 1016
Score = 31.1 bits (67), Expect = 0.46
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 398 SSVCYXCNRTGHFAREC 448
SS CY C + GH+AR+C
Sbjct: 923 SSECYKCKQPGHYARDC 939
Score = 29.1 bits (62), Expect = 1.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 401 SVCYXCNRTGHFAREC 448
S C+ C + GHFAR+C
Sbjct: 970 SECFKCKQPGHFARDC 985
Score = 27.1 bits (57), Expect = 7.4
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 407 CYXCNRTGHFAREC 448
C+ C + GHF+R+C
Sbjct: 949 CFKCKQPGHFSRDC 962
>02_04_0577 -
24011542-24011906,24012285-24012385,24013029-24013287,
24014176-24014264,24015331-24015419
Length = 300
Score = 31.1 bits (67), Expect = 0.46
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFAREC 448
S CY C GHFAREC
Sbjct: 84 SDMKCYECGEPGHFAREC 101
>12_02_0792 - 23191120-23191313,23191419-23191775,23192027-23192108,
23192186-23193097,23193190-23193346,23193540-23193694,
23194667-23194819,23195334-23195627,23195711-23195896,
23196062-23196662,23196868-23196992,23197101-23197197,
23197299-23197411,23198129-23198233
Length = 1176
Score = 30.7 bits (66), Expect = 0.60
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 398 SSVCYXCNRTGHFARECTQ 454
S +CY C ++GH +R+C +
Sbjct: 999 SKICYKCKKSGHLSRDCPE 1017
>08_01_0688 - 6072815-6073918
Length = 367
Score = 30.7 bits (66), Expect = 0.60
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 404 VCYXCNRTGHFAREC 448
VC+ C + GHFAREC
Sbjct: 308 VCFNCYKPGHFAREC 322
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 30.7 bits (66), Expect = 0.60
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 389 AMSSSVCYXCNRTGHFARECTQ 454
A + +CY C GH++R+C Q
Sbjct: 312 AKKTLICYNCKEPGHYSRDCLQ 333
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 30.7 bits (66), Expect = 0.60
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 389 AMSSSVCYXCNRTGHFARECTQ 454
A + +CY C GH++R+C Q
Sbjct: 204 AKKTLICYNCKEPGHYSRDCLQ 225
>04_02_0022 - 8645919-8646697,8646819-8646875,8653799-8654318
Length = 451
Score = 30.7 bits (66), Expect = 0.60
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 404 VCYXCNRTGHFAREC 448
VC+ C + GHFAREC
Sbjct: 392 VCFNCYKPGHFAREC 406
>04_01_0252 - 3329712-3331061
Length = 449
Score = 30.7 bits (66), Expect = 0.60
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 389 AMSSSVCYXCNRTGHFARECTQ 454
A + +CY C GH++R+C Q
Sbjct: 389 AKKTLICYNCKEPGHYSRDCLQ 410
>09_02_0546 - 10454404-10455687
Length = 427
Score = 30.3 bits (65), Expect = 0.80
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFARECTQ 454
+S +C+ C+ GH+AR C Q
Sbjct: 98 ASIICFMCDEQGHYARNCPQ 117
>06_01_1059 + 8512335-8513444
Length = 369
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 404 VCYXCNRTGHFAREC 448
VC+ C GHFAREC
Sbjct: 312 VCFNCYNPGHFAREC 326
>02_02_0357 + 9360108-9360754,9363732-9364137
Length = 350
Score = 29.9 bits (64), Expect = 1.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 389 AMSSSVCYXCNRTGHFARECTQ 454
A + +CY C GH++R+C Q
Sbjct: 290 AKKTLICYNCKGPGHYSRDCLQ 311
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFARECTQG 457
S VC CN+ GH +R+C G
Sbjct: 195 SDVVCRACNQVGHMSRDCMAG 215
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 398 SSVCYXCNRTGHFAREC 448
+ +C C R GHFAR+C
Sbjct: 38 NDLCNNCKRPGHFARDC 54
Score = 28.3 bits (60), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFARECT 451
+ +C C ++GH AREC+
Sbjct: 94 NEGICRNCGKSGHIARECS 112
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 404 VCYXCNRTGHFAREC 448
VC CN +GH AREC
Sbjct: 161 VCNLCNVSGHLAREC 175
Score = 26.6 bits (56), Expect = 9.8
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFARECTQGGV 463
S +C+ C GH A C G+
Sbjct: 75 SKDLCWNCKEPGHMANSCPNEGI 97
>07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637
Length = 309
Score = 29.5 bits (63), Expect = 1.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 407 CYXCNRTGHFAREC 448
C+ C R GH+AREC
Sbjct: 128 CFKCGRAGHWAREC 141
>03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594
Length = 323
Score = 29.5 bits (63), Expect = 1.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 407 CYXCNRTGHFARECTQGG 460
C+ C R GH+AR+C G
Sbjct: 131 CFECGRAGHWARDCPNPG 148
>02_03_0327 + 17770766-17770819,17770913-17771380
Length = 173
Score = 29.5 bits (63), Expect = 1.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 404 VCYXCNRTGHFARECTQ 454
+C+ C GHFAREC++
Sbjct: 119 LCFNCYEPGHFARECSK 135
>10_02_0188 - 6473353-6473432,6473619-6474816
Length = 425
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFARECTQ 454
+S++C+ C+ GH+ARE Q
Sbjct: 98 ASNICFTCDEQGHYARERPQ 117
>05_01_0553 + 4849535-4849553,4850727-4851913
Length = 401
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 395 SSSVCYXCNRTGHFAREC 448
S+ VCY C GHF +C
Sbjct: 135 SARVCYVCKEPGHFIADC 152
>02_05_0839 -
32113992-32114210,32114321-32114484,32114612-32114708,
32115822-32115944,32116770-32117141
Length = 324
Score = 28.3 bits (60), Expect = 3.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 407 CYXCNRTGHFAREC 448
CY C R GH++R+C
Sbjct: 9 CYKCGRPGHWSRDC 22
>02_02_0741 + 13590883-13591582,13591955-13592250
Length = 331
Score = 27.9 bits (59), Expect = 4.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 398 SSVCYXCNRTGHFAREC 448
S+ CY C GH+ R C
Sbjct: 90 SATCYDCGEQGHYVRNC 106
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 389 AMSSSVCYXCNRTGHFARECTQG 457
A S C+ C GH+ R CT G
Sbjct: 104 AHGSDHCFNCGMEGHWHRNCTAG 126
>12_02_0077 - 13288916-13289659,13289689-13289691
Length = 248
Score = 27.1 bits (57), Expect = 7.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 404 VCYXCNRTGHFAREC 448
VC+ C GHF +EC
Sbjct: 191 VCFNCYEPGHFVKEC 205
>11_03_0149 +
10787332-10787454,10787776-10788529,10790406-10790473,
10791254-10791421
Length = 370
Score = 27.1 bits (57), Expect = 7.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 404 VCYXCNRTGHFARECTQ 454
+C+ C+ GH+A C Q
Sbjct: 269 ICFNCHEEGHYANRCPQ 285
>10_06_0146 +
11230357-11230364,11230847-11230893,11231535-11231642,
11231789-11231828,11231995-11232757
Length = 321
Score = 27.1 bits (57), Expect = 7.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 404 VCYXCNRTGHFAREC 448
VC+ C GHF +EC
Sbjct: 264 VCFNCYEPGHFVKEC 278
>08_02_0701 + 20177860-20178603
Length = 247
Score = 27.1 bits (57), Expect = 7.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 407 CYXCNRTGHFAREC 448
CY C GH AR+C
Sbjct: 232 CYNCGEPGHIARDC 245
>03_02_1028 - 13444284-13445381
Length = 365
Score = 27.1 bits (57), Expect = 7.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 404 VCYXCNRTGHFAREC 448
VC+ C GHF +EC
Sbjct: 312 VCFNCYEPGHFVKEC 326
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 26.6 bits (56), Expect = 9.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 398 SSVCYXCNRTGHFAREC 448
S+ CY C GH++R C
Sbjct: 401 SNPCYRCGEDGHWSRNC 417
>07_03_0964 - 22989470-22989618,22989729-22990476
Length = 298
Score = 26.6 bits (56), Expect = 9.8
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +2
Query: 407 CYXCNRTGHFARECTQ 454
C+ C ++GH+A++C +
Sbjct: 214 CFVCGKSGHWAKDCPE 229
>01_05_0320 -
20874691-20875230,20879337-20879590,20880014-20881087,
20881259-20881511,20881548-20882369
Length = 980
Score = 26.6 bits (56), Expect = 9.8
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +2
Query: 407 CYXCNRTGHFARECTQ 454
C+ C ++GH+A++C +
Sbjct: 214 CFVCGKSGHWAKDCPE 229
>01_01_0419 -
3146851-3147339,3148428-3148663,3148847-3149793,
3150258-3150356,3151128-3151501
Length = 714
Score = 26.6 bits (56), Expect = 9.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 407 CYXCNRTGHFARECTQ 454
C+ C + GHFA EC +
Sbjct: 676 CHRCGKFGHFADECDE 691
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 398 SSVCYXCNRTGHFARECTQG 457
S C+ C GH+AR+C G
Sbjct: 108 SGRCFNCGIDGHWARDCKAG 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,770,208
Number of Sequences: 37544
Number of extensions: 138037
Number of successful extensions: 436
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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