Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1j02
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.98 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.98 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.9  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   3.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 195 IVGLSKLSLDDVEPEITVLGIHDTSNRVAT 284
           I  L  +SL+ ++PE+T    H   NR+ T
Sbjct: 185 ISSLENISLNGIDPELTESEQHRLQNRLYT 214


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 195 IVGLSKLSLDDVEPEITVLGIHDTSNRVAT 284
           I  L  +SL+ ++PE+T    H   NR+ T
Sbjct: 223 ISSLENISLNGIDPELTESEQHRLQNRLYT 252


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -1

Query: 404 YFPVHTFANLVTVFQKCVWIAFIK*YSIRLIAST*HVISSCSNTIRSIMYT*NGDLRFHI 225
           Y+P  T++N +   Q+ +W  F   Y  + I    +  S  S  I S  Y  N D ++H 
Sbjct: 295 YYPTMTYSNGLPFPQRPIWSNF-PIYKYKYIREIMNKESRISAAIDS-GYILNNDGKWHN 352

Query: 224 IERE 213
           I  E
Sbjct: 353 IYSE 356


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -1

Query: 404 YFPVHTFANLVTVFQKCVWIAFIK*YSIRLIAST*HVISSCSNTIRSIMYT*NGDLRFHI 225
           Y+P  T++N +   Q+ +W  F   Y  + I    +  S  S  I S  Y  N D ++H 
Sbjct: 295 YYPTMTYSNGLPFPQRPIWSNF-PIYKYKYIREIMNKESRISAAIDS-GYILNNDGKWHN 352

Query: 224 IERE 213
           I  E
Sbjct: 353 IYSE 356


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 313 IKRMLYYLMNAIQTHF*KTVTRLAKVCTGKYFFGVLEM 426
           I+ +L  +M A+ T+  +    L K  TG+Y F  L +
Sbjct: 16  IQIVLIIVMGALMTYGPEANVNLLKNRTGRYMFTYLHL 53


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 104  PSKKTYYPVTDNGSHSNFVF 45
            P+K TY+  TD   H  + F
Sbjct: 1268 PAKNTYFEATDLQQHVEYQF 1287


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 104  PSKKTYYPVTDNGSHSNFVF 45
            P+K TY+  TD   H  + F
Sbjct: 1264 PAKNTYFEATDLQQHVEYQF 1283


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,567
Number of Sequences: 438
Number of extensions: 4287
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)