Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1i22
(474 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D29956-1|BAA06225.2| 1120|Homo sapiens KIAA0055 protein. 72 9e-13
BX537420-1|CAD97662.1| 1118|Homo sapiens hypothetical protein pr... 72 9e-13
BC110590-1|AAI10591.1| 1118|Homo sapiens ubiquitin specific pept... 72 9e-13
BC051345-1|AAH51345.1| 480|Homo sapiens USP8 protein protein. 72 9e-13
BC038801-1|AAH38801.1| 478|Homo sapiens USP8 protein protein. 72 9e-13
BC026954-1|AAH26954.1| 481|Homo sapiens USP8 protein protein. 72 9e-13
BC015545-1|AAH15545.1| 483|Homo sapiens Unknown (protein for IM... 72 9e-13
>D29956-1|BAA06225.2| 1120|Homo sapiens KIAA0055 protein.
Length = 1120
Score = 72.1 bits (169), Expect = 9e-13
Identities = 37/102 (36%), Positives = 62/102 (60%)
Frame = +2
Query: 164 KQLHLGKCIEDLDXLHNVPDLKTKRANLLCKTAQKLFESAEEARKNGDEEYSYVYYMKYL 343
K+L+L ++DL+ V K + + +A K+F++AEE R + DEE +YV YMKY+
Sbjct: 11 KELYLSSSLKDLNKKTEVKPEKISTKSYV-HSALKIFKTAEECRLDRDEERAYVLYMKYV 69
Query: 344 RVIAYLSKDKEYLKDKSYYNSMLGAKNPNKAIDAAEKLKNSL 469
V + K ++ + + Y++S+LG N KA++ AE+L SL
Sbjct: 70 TVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEAERLSESL 111
>BX537420-1|CAD97662.1| 1118|Homo sapiens hypothetical protein
protein.
Length = 1118
Score = 72.1 bits (169), Expect = 9e-13
Identities = 37/102 (36%), Positives = 62/102 (60%)
Frame = +2
Query: 164 KQLHLGKCIEDLDXLHNVPDLKTKRANLLCKTAQKLFESAEEARKNGDEEYSYVYYMKYL 343
K+L+L ++DL+ V K + + +A K+F++AEE R + DEE +YV YMKY+
Sbjct: 9 KELYLSSSLKDLNKKTEVKPEKISTKSYV-HSALKIFKTAEECRLDRDEERAYVLYMKYV 67
Query: 344 RVIAYLSKDKEYLKDKSYYNSMLGAKNPNKAIDAAEKLKNSL 469
V + K ++ + + Y++S+LG N KA++ AE+L SL
Sbjct: 68 TVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEAERLSESL 109
>BC110590-1|AAI10591.1| 1118|Homo sapiens ubiquitin specific
peptidase 8 protein.
Length = 1118
Score = 72.1 bits (169), Expect = 9e-13
Identities = 37/102 (36%), Positives = 62/102 (60%)
Frame = +2
Query: 164 KQLHLGKCIEDLDXLHNVPDLKTKRANLLCKTAQKLFESAEEARKNGDEEYSYVYYMKYL 343
K+L+L ++DL+ V K + + +A K+F++AEE R + DEE +YV YMKY+
Sbjct: 9 KELYLSSSLKDLNKKTEVKPEKISTKSYV-HSALKIFKTAEECRLDRDEERAYVLYMKYV 67
Query: 344 RVIAYLSKDKEYLKDKSYYNSMLGAKNPNKAIDAAEKLKNSL 469
V + K ++ + + Y++S+LG N KA++ AE+L SL
Sbjct: 68 TVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEAERLSESL 109
>BC051345-1|AAH51345.1| 480|Homo sapiens USP8 protein protein.
Length = 480
Score = 72.1 bits (169), Expect = 9e-13
Identities = 37/102 (36%), Positives = 62/102 (60%)
Frame = +2
Query: 164 KQLHLGKCIEDLDXLHNVPDLKTKRANLLCKTAQKLFESAEEARKNGDEEYSYVYYMKYL 343
K+L+L ++DL+ V K + + +A K+F++AEE R + DEE +YV YMKY+
Sbjct: 9 KELYLSSSLKDLNKKTEVKPEKISTKSYV-HSALKIFKTAEECRLDRDEERAYVLYMKYV 67
Query: 344 RVIAYLSKDKEYLKDKSYYNSMLGAKNPNKAIDAAEKLKNSL 469
V + K ++ + + Y++S+LG N KA++ AE+L SL
Sbjct: 68 TVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEAERLSESL 109
>BC038801-1|AAH38801.1| 478|Homo sapiens USP8 protein protein.
Length = 478
Score = 72.1 bits (169), Expect = 9e-13
Identities = 37/102 (36%), Positives = 62/102 (60%)
Frame = +2
Query: 164 KQLHLGKCIEDLDXLHNVPDLKTKRANLLCKTAQKLFESAEEARKNGDEEYSYVYYMKYL 343
K+L+L ++DL+ V K + + +A K+F++AEE R + DEE +YV YMKY+
Sbjct: 9 KELYLSSSLKDLNKKTEVKPEKISTKSYV-HSALKIFKTAEECRLDRDEERAYVLYMKYV 67
Query: 344 RVIAYLSKDKEYLKDKSYYNSMLGAKNPNKAIDAAEKLKNSL 469
V + K ++ + + Y++S+LG N KA++ AE+L SL
Sbjct: 68 TVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEAERLSESL 109
>BC026954-1|AAH26954.1| 481|Homo sapiens USP8 protein protein.
Length = 481
Score = 72.1 bits (169), Expect = 9e-13
Identities = 37/102 (36%), Positives = 62/102 (60%)
Frame = +2
Query: 164 KQLHLGKCIEDLDXLHNVPDLKTKRANLLCKTAQKLFESAEEARKNGDEEYSYVYYMKYL 343
K+L+L ++DL+ V K + + +A K+F++AEE R + DEE +YV YMKY+
Sbjct: 9 KELYLSSSLKDLNKKTEVKPEKISTKSYV-HSALKIFKTAEECRLDRDEERAYVLYMKYV 67
Query: 344 RVIAYLSKDKEYLKDKSYYNSMLGAKNPNKAIDAAEKLKNSL 469
V + K ++ + + Y++S+LG N KA++ AE+L SL
Sbjct: 68 TVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEAERLSESL 109
>BC015545-1|AAH15545.1| 483|Homo sapiens Unknown (protein for
IMAGE:3914321) protein.
Length = 483
Score = 72.1 bits (169), Expect = 9e-13
Identities = 37/102 (36%), Positives = 62/102 (60%)
Frame = +2
Query: 164 KQLHLGKCIEDLDXLHNVPDLKTKRANLLCKTAQKLFESAEEARKNGDEEYSYVYYMKYL 343
K+L+L ++DL+ V K + + +A K+F++AEE R + DEE +YV YMKY+
Sbjct: 9 KELYLSSSLKDLNKKTEVKPEKISTKSYV-HSALKIFKTAEECRLDRDEERAYVLYMKYV 67
Query: 344 RVIAYLSKDKEYLKDKSYYNSMLGAKNPNKAIDAAEKLKNSL 469
V + K ++ + + Y++S+LG N KA++ AE+L SL
Sbjct: 68 TVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEAERLSESL 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,047,761
Number of Sequences: 237096
Number of extensions: 1046373
Number of successful extensions: 2118
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2113
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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