Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1i04
(788 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.3
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 22 7.5
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 22 7.5
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 22 7.5
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 7.5
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 22 7.5
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 7.5
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 7.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.9
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.9
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.9
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.9
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.9
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 215 MR*TKNTGGKKYLRKVD 165
M+ TK T KYLRKVD
Sbjct: 503 MKPTKGTELLKYLRKVD 519
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 380 MIKLLVMMLIAIMFSIRQMIHQPLRLFIRWDSREHHR 270
++ LL M ++AIM + + +PL F + + HR
Sbjct: 6 IVGLLFMAMVAIMAAPVEDEFEPLEHFENEERADRHR 42
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.8 bits (44), Expect = 7.5
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +3
Query: 351 NEHHNKQFDHDAFLGEDQAKTFDQLSPEESKRRLGEIADKIDSDQDGFITLVELKDWI 524
N H KQ HD L Q D+ K E+A +I ++ +V+ D +
Sbjct: 296 NTDHTKQLSHDVLLRAKQIGFSDKQIASVVKS--SELAVRIQRQENNIRPMVKQIDTV 351
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 380 MIKLLVMMLIAIMFSIRQMIHQPLRLFIRWDSREHHR 270
++ LL M ++AIM + + +PL F + + HR
Sbjct: 6 IVGLLFMAMVAIMAAPVEDEFEPLEHFENEERADRHR 42
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 233 QNVEVFLCAIGNFDGVRGSPN 295
+N +F A+ F GVRG N
Sbjct: 49 ENFGIFKRALMGFQGVRGKKN 69
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 233 QNVEVFLCAIGNFDGVRGSPN 295
+N +F A+ F GVRG N
Sbjct: 50 ENFGIFKRALMGFQGVRGKKN 70
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 233 QNVEVFLCAIGNFDGVRGSPN 295
+N +F A+ F GVRG N
Sbjct: 49 ENFGIFKRALMGFQGVRGKKN 69
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 233 QNVEVFLCAIGNFDGVRGSPN 295
+N +F A+ F GVRG N
Sbjct: 49 ENFGIFKRALMGFQGVRGKKN 69
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +2
Query: 407 QNFRSTITRRK*EETWRNSGQDR 475
+++++ + RK ETW+ +DR
Sbjct: 48 KSYKNENSYRKYRETWKERSRDR 70
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +2
Query: 407 QNFRSTITRRK*EETWRNSGQDR 475
+++++ + RK ETW+ +DR
Sbjct: 48 KSYKNENSYRKYRETWKERSRDR 70
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +2
Query: 407 QNFRSTITRRK*EETWRNSGQDR 475
+++++ + RK ETW+ +DR
Sbjct: 48 KSYKNENSYRKYRETWKERSRDR 70
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +2
Query: 407 QNFRSTITRRK*EETWRNSGQDR 475
+++++ + RK ETW+ +DR
Sbjct: 48 KSYKNENSYRKYRETWKERSRDR 70
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 339 EHYRNEHHNKQFDHDAFLGE 398
E++ + + K FD + LGE
Sbjct: 414 EYFEHRYQGKFFDEELILGE 433
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 339 EHYRNEHHNKQFDHDAFLGE 398
E++ + + K FD + LGE
Sbjct: 382 EYFEHRYQGKFFDEELILGE 401
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,071
Number of Sequences: 438
Number of extensions: 5020
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -