Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1h17
(719 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr ... 48 2e-06
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 42 7e-05
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 42 9e-05
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 41 2e-04
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 39 8e-04
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 38 0.001
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 38 0.001
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 38 0.001
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 36 0.006
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 36 0.006
SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 33 0.041
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 33 0.041
SPBPB2B2.16c |||MFS family membrane transporter |Schizosaccharom... 33 0.041
SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|ch... 33 0.041
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 33 0.054
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 32 0.072
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 31 0.17
SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr... 31 0.22
SPBC1683.12 |||nicotinic acid plasma membrane transporter |Schiz... 28 1.5
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.7
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 27 2.7
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 27 3.6
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 26 6.2
>SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 448
Score = 47.6 bits (108), Expect = 2e-06
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = +1
Query: 427 YGWPSPTLLYLESEESSIPTTAYQG--SWIVSIMILCSALTPIPSAYLADKF-GRKTTLL 597
YG +P L + + I Q S ++++ + + P +LADKF RK +L
Sbjct: 31 YGIITPILPFSLVDRVGISPDRVQSVISTLLAVYAVANIAASSPIGFLADKFLTRKVPML 90
Query: 598 LGAIPFIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTV 714
+G I L+ S+PML VAR+ GL VV+TV
Sbjct: 91 IGLIFLTSATALLTFGNSVPMLIVARVLQGLSAAVVWTV 129
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 42.3 bits (95), Expect = 7e-05
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +1
Query: 508 IVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARIFSG 687
I+SI +L A++P+ SA L++ FGR+ L +G + FI+ + +A++ +Y+ R +G
Sbjct: 87 ILSIYLLVFAISPMISAPLSEVFGRRMLLQVGNVIFIVFNMACGLARTKAQMYIFRFLAG 146
Query: 688 LG 693
G
Sbjct: 147 FG 148
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 41.9 bits (94), Expect = 9e-05
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 496 QGSWIVSI-MILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVA 672
Q SW + MI C+A P+ + D +GRK TLL F IG L ++SL L A
Sbjct: 125 QVSWTATAYMISCTAFQPLFGKF-CDIYGRKKTLLAAYCVFGIGCFLCGTSRSLWQLVAA 183
Query: 673 RIFSGLGYG 699
R +G+G G
Sbjct: 184 RAIAGIGGG 192
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 40.7 bits (91), Expect = 2e-04
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +1
Query: 496 QGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVAR 675
Q I S + ++ S +LAD GRK LL F+IG +++ ++++ M+ V R
Sbjct: 121 QKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGR 180
Query: 676 IFSGLGYGV 702
G G G+
Sbjct: 181 FIVGYGIGL 189
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 38.7 bits (86), Expect = 8e-04
Identities = 21/70 (30%), Positives = 40/70 (57%)
Frame = +1
Query: 508 IVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARIFSG 687
+ + +I +A P+ L+D FGR+ T++ F +G +++SLP L +AR +G
Sbjct: 72 VTAYLITNTAFQPLYGR-LSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAG 130
Query: 688 LGYGVVYTVA 717
+G G + T++
Sbjct: 131 IGGGGLGTMS 140
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 37.9 bits (84), Expect = 0.001
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +1
Query: 484 TTAYQGSWIVSIM----ILCSALT-PIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 648
TT + S VS++ LC + PI A L++ GRK LL+G F I I V VAK
Sbjct: 162 TTIFHISLTVSLLTMTVFLCGYIAGPIVWAPLSELSGRKLPLLIGMFGFGIFNISVAVAK 221
Query: 649 SLPMLYVARIFSGLGYGVVYTV 714
+ + + R FSG TV
Sbjct: 222 DIQTIMMCRFFSGFFASAPLTV 243
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +1
Query: 505 WIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARIFS 684
+I S L + L I + LAD FGRK + + +I I+G I+ + A L + V R
Sbjct: 131 FITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVI 190
Query: 685 GLGYGV 702
G G G+
Sbjct: 191 GWGVGI 196
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 511 VSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARIFSGL 690
VS+ +L L PI A +++ GRKT L +G F + I V A+ + + + R F G
Sbjct: 180 VSLFMLGYCLGPICWAPMSEITGRKTPLYIGLFLFSVFQIAVATAQDIQTIMICRFFGGY 239
Query: 691 G 693
G
Sbjct: 240 G 240
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 35.9 bits (79), Expect = 0.006
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 547 IPSAYLADKFGRKTTLLLGAIPFIIGWILVIVA-KSLPMLYVARIFSGLGYGVVYTVA 717
I S+ +AD+FG++ +++ +IIG I+ + A S + VA+I++G+G G + +A
Sbjct: 78 IISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSWVQIMVAKIWTGIGIGALSVLA 135
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 35.9 bits (79), Expect = 0.006
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +1
Query: 511 VSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARIFSG 687
+S+ + A PI A +++ GRK L++G F I I V VAK + + + R FSG
Sbjct: 139 MSLYVCGFASGPILWAPISELVGRKIPLIVGMFMFSIFSIAVAVAKDVQTVMICRFFSG 197
>SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 33.1 bits (72), Expect = 0.041
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +1
Query: 439 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 618
+P++ + + + T G+ + ++ IL L P L+++FGR+ L+G F
Sbjct: 63 APSISNIAEQFHASRTLVTLGATLYTLGILFGNLIFAP---LSEQFGRRPIYLIGYSVFA 119
Query: 619 IGWILVIVAKSLPMLYVARIFSGL 690
+ I + ++ +L M V R FSGL
Sbjct: 120 LLQIPIALSVNLAMFLVFRFFSGL 143
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 33.1 bits (72), Expect = 0.041
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 511 VSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARIFSGL 690
+++ +L PI A L++ GRK +L+G + F I I V V K + + + R F+G
Sbjct: 177 MTVFLLGYCSGPIIWAPLSELSGRKPPILIGMLGFGIFNISVAVGKDIQTIMMCRFFAGF 236
Query: 691 GYGVVYTV 714
TV
Sbjct: 237 FASAPLTV 244
>SPBPB2B2.16c |||MFS family membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 33.1 bits (72), Expect = 0.041
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +1
Query: 439 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 618
+P++ + + + T G+ + ++ IL L P L+++FGR+ L+G F
Sbjct: 63 APSISNIAEQFHASRTLVTLGATLYTLGILFGNLIFAP---LSEQFGRRPIYLIGYSVFA 119
Query: 619 IGWILVIVAKSLPMLYVARIFSGL 690
+ I + ++ +L M V R FSGL
Sbjct: 120 LLQIPIALSVNLAMFLVFRFFSGL 143
>SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 33.1 bits (72), Expect = 0.041
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +1
Query: 439 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 618
+P++ + + + T G+ + ++ IL L P L+++FGR+ L+G F
Sbjct: 63 APSISNIAEQFHASRTLVTLGATLYTLGILFGNLIFAP---LSEQFGRRPIYLIGYSVFA 119
Query: 619 IGWILVIVAKSLPMLYVARIFSGL 690
+ I + ++ +L M V R FSGL
Sbjct: 120 LLQIPIALSVNLAMFLVFRFFSGL 143
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 32.7 bits (71), Expect = 0.054
Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 553 SAYLADKFGRKTTLLLGAIPFIIGWIL-VIVAKSLPMLYVARIFSGLGYGVVYTV 714
S+ +ADK G++ ++++ ++IG I+ V S + VA+I++GL G + +
Sbjct: 44 SSPVADKIGKRLSIIVWTTVYLIGIIIQVTTVPSWVQILVAKIWTGLSIGALSVI 98
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 32.3 bits (70), Expect = 0.072
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 502 SWIVSIMILCS-ALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARI 678
SWI S +L S A+ P + + GRK L + F++G L ++++ L V R
Sbjct: 134 SWIGSAYVLASNAVLPAVGVF-CNILGRKIVLYICIFFFMLGSALCGASQNMIWLIVCRA 192
Query: 679 FSGLGYGVVYTV 714
GLG G + ++
Sbjct: 193 IQGLGGGGIISL 204
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 31.1 bits (67), Expect = 0.17
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 484 TTAYQGSWIVSIM-----ILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 648
T+A+ G ++S + I+ +A+ P P A L+D FGR L + +++G IL+ +
Sbjct: 122 TSAFAGHSLLSTIAVANNIISAAIKP-PLARLSDVFGRLEAFLFSLLLYLVGLILMAAST 180
Query: 649 SLPMLYVARIFSGLGY 696
++ + GY
Sbjct: 181 NVQTYAGGSVLYNAGY 196
>SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 537
Score = 30.7 bits (66), Expect = 0.22
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 496 QGSWIV-SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVA 672
Q S++V S+ I+ +A P+ ++D FGRK + I +II I +A +LPM+ +
Sbjct: 125 QVSYLVQSLFIVGNAFGPMLLGPMSDIFGRKWVYVGSLILYIIFQIPQALAYNLPMMAIN 184
Query: 673 RIFSG 687
+G
Sbjct: 185 SAIAG 189
>SPBC1683.12 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = +1
Query: 490 AYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYV 669
AYQ S VS+ PS L KFG L A+ IIGW LV + Y
Sbjct: 78 AYQYSAAVSVFYATYITAETPSVLLVKKFG--PHYYLSAM--IIGWSLVTIFTCFVRHYW 133
Query: 670 ARIFSGLGYGV 702
+ + + L G+
Sbjct: 134 SLVLTRLLLGI 144
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 502 SWIVSIMILC-SALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARI 678
SWI + L +++ P +++ GRK L + F+ G + A+++ L + R
Sbjct: 128 SWIGTAYSLAETSILPF-CGIMSEVVGRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRA 186
Query: 679 FSGLGYGVVYTV 714
G+G G + ++
Sbjct: 187 VQGIGGGGIMSL 198
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 502 SWIVSIMILC-SALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARI 678
SWI + L +++ P +++ GRK L + F+ G + A+++ L + R
Sbjct: 128 SWIGTAYTLAQTSILPF-CGIMSEVVGRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRA 186
Query: 679 FSGLGYG 699
G+G G
Sbjct: 187 VQGIGGG 193
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +1
Query: 514 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSLPMLYVARIFSG 687
++ ++ L P+ + L++ +GR+ + G F + I ++ +L M V R FSG
Sbjct: 82 TLYVIGVMLGPLIFSPLSELYGRRPLNIFGYTLFALMQIPTALSVNLAMFVVFRFFSG 139
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 25.8 bits (54), Expect = 6.2
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 537 SNTDSIRLSRRQIRKKNYTASRSYTLHNRLDTCYR-SEVLANAVRRA 674
S D +LS R IR+ N +YT N + C R ++ + +RRA
Sbjct: 319 SQKDLDKLSSRDIRRLNEKVEHTYT-QNVHNACLREQQIKEDEIRRA 364
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,668,641
Number of Sequences: 5004
Number of extensions: 52058
Number of successful extensions: 168
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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