Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1g21
(641 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26648-1|AAC71078.1| 301|Homo sapiens syntaxin 5 protein. 40 0.006
BX537426-1|CAD97668.1| 355|Homo sapiens hypothetical protein pr... 40 0.006
BT019647-1|AAV38453.1| 301|Homo sapiens syntaxin 5A protein. 40 0.006
BT019646-1|AAV38452.1| 301|Homo sapiens syntaxin 5A protein. 40 0.006
BC012137-1|AAH12137.2| 355|Homo sapiens syntaxin 5 protein. 40 0.006
BC002645-1|AAH02645.1| 267|Homo sapiens STX5 protein protein. 40 0.006
AY005130-1|AAF89088.1| 666|Homo sapiens frizzled-3 protein. 31 4.6
AJ272427-1|CAB89114.1| 666|Homo sapiens frizzled homolog 3 prot... 31 4.6
AB039723-1|BAA94968.1| 666|Homo sapiens WNT receptor frizzled-3... 31 4.6
>U26648-1|AAC71078.1| 301|Homo sapiens syntaxin 5 protein.
Length = 301
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 408 MASRDRTSEFISTVRSLQ----GRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 575
M+ RDRT EF+S +SLQ G NKP +R R+ S+F MAK I K++++T
Sbjct: 1 MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 54
Query: 576 YTXXXXXXXXXXXXXXFDDR 635
+ FDD+
Sbjct: 55 FAKLEKLTILAKRKSLFDDK 74
>BX537426-1|CAD97668.1| 355|Homo sapiens hypothetical protein
protein.
Length = 355
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 408 MASRDRTSEFISTVRSLQ----GRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 575
M+ RDRT EF+S +SLQ G NKP +R R+ S+F MAK I K++++T
Sbjct: 55 MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 108
Query: 576 YTXXXXXXXXXXXXXXFDDR 635
+ FDD+
Sbjct: 109 FAKLEKLTILAKRKSLFDDK 128
>BT019647-1|AAV38453.1| 301|Homo sapiens syntaxin 5A protein.
Length = 301
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 408 MASRDRTSEFISTVRSLQ----GRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 575
M+ RDRT EF+S +SLQ G NKP +R R+ S+F MAK I K++++T
Sbjct: 1 MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 54
Query: 576 YTXXXXXXXXXXXXXXFDDR 635
+ FDD+
Sbjct: 55 FAKLEKLTILAKRKSLFDDK 74
>BT019646-1|AAV38452.1| 301|Homo sapiens syntaxin 5A protein.
Length = 301
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 408 MASRDRTSEFISTVRSLQ----GRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 575
M+ RDRT EF+S +SLQ G NKP +R R+ S+F MAK I K++++T
Sbjct: 1 MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 54
Query: 576 YTXXXXXXXXXXXXXXFDDR 635
+ FDD+
Sbjct: 55 FAKLEKLTILAKRKSLFDDK 74
>BC012137-1|AAH12137.2| 355|Homo sapiens syntaxin 5 protein.
Length = 355
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 408 MASRDRTSEFISTVRSLQ----GRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 575
M+ RDRT EF+S +SLQ G NKP +R R+ S+F MAK I K++++T
Sbjct: 55 MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 108
Query: 576 YTXXXXXXXXXXXXXXFDDR 635
+ FDD+
Sbjct: 109 FAKLEKLTILAKRKSLFDDK 128
>BC002645-1|AAH02645.1| 267|Homo sapiens STX5 protein protein.
Length = 267
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 408 MASRDRTSEFISTVRSLQ----GRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 575
M+ RDRT EF+S +SLQ G NKP +R R+ S+F MAK I K++++T
Sbjct: 1 MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 54
Query: 576 YTXXXXXXXXXXXXXXFDDR 635
+ FDD+
Sbjct: 55 FAKLEKLTILAKRKSLFDDK 74
>AY005130-1|AAF89088.1| 666|Homo sapiens frizzled-3 protein.
Length = 666
Score = 30.7 bits (66), Expect = 4.6
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 113 ILYTHECTMKVRNYLNAIGFLSED*RLQCDASSKAKYRRYRKTLGNRN 256
I++ C M V + + IGFL ED R+ C+AS A+Y+ T G+ N
Sbjct: 238 IIFYAVCYMMV-SLIFFIGFLLED-RVACNASIPAQYKASTVTQGSHN 283
>AJ272427-1|CAB89114.1| 666|Homo sapiens frizzled homolog 3
protein.
Length = 666
Score = 30.7 bits (66), Expect = 4.6
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 113 ILYTHECTMKVRNYLNAIGFLSED*RLQCDASSKAKYRRYRKTLGNRN 256
I++ C M V + + IGFL ED R+ C+AS A+Y+ T G+ N
Sbjct: 238 IIFYAVCYMMV-SLIFFIGFLLED-RVACNASIPAQYKASTVTQGSHN 283
>AB039723-1|BAA94968.1| 666|Homo sapiens WNT receptor frizzled-3
protein.
Length = 666
Score = 30.7 bits (66), Expect = 4.6
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 113 ILYTHECTMKVRNYLNAIGFLSED*RLQCDASSKAKYRRYRKTLGNRN 256
I++ C M V + + IGFL ED R+ C+AS A+Y+ T G+ N
Sbjct: 238 IIFYAVCYMMV-SLIFFIGFLLED-RVACNASIPAQYKASTVTQGSHN 283
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,454,800
Number of Sequences: 237096
Number of extensions: 1482807
Number of successful extensions: 2752
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2741
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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