Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1g10
(760 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 3.1
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 5.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 7.2
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 9.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.5
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.5
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 658 HPSSQPDCPPEVAK*TLPITYLMFLPNLIFHF 753
HP +A+ T P+ Y MFL H+
Sbjct: 454 HPIRVAKTIDVIARITFPVAYFMFLTFFFIHY 485
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 658 HPSSQPDCPPEVAK*TLPITYLMFLPNLIFHF 753
HP +A+ T P+ Y MFL H+
Sbjct: 440 HPIRVAKTIDVIARITFPVAYFMFLTFFFIHY 471
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 658 HPSSQPDCPPEVAK*TLPITYLMFLPNLIFHF 753
HP +A+ T P+ Y MFL H+
Sbjct: 474 HPIRVAKTIDVIARITFPVAYFMFLTFFFIHY 505
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 658 HPSSQPDCPPEVAK*TLPITYLMFLPNLIFHF 753
HP +A+ T P+ Y MFL H+
Sbjct: 423 HPIRVAKTIDVIARITFPVAYFMFLTFFFIHY 454
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI+ + ++P+P+
Sbjct: 331 YKPLYYNIINIEQIPVPV 348
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 140 GISLRLSAMRTRQEHEL 90
GIS +SA+R ++HEL
Sbjct: 438 GISRAMSALRILEKHEL 454
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI + ++P+P+
Sbjct: 331 YKPLHYNINYIEQIPVPV 348
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 373 RLSFHKFHELLPS 335
RL +H FH +PS
Sbjct: 212 RLGYHLFHTYIPS 224
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI + ++P+P+
Sbjct: 98 YKPLYYNINYIEQIPVPV 115
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI + ++P+P+
Sbjct: 98 YKPLYYNINYIEQIPVPV 115
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI + ++P+P+
Sbjct: 98 YKPLYYNINYIEQIPVPV 115
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI + ++P+P+
Sbjct: 98 YKPLYYNINYIEQIPVPV 115
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +1
Query: 640 PAFRAAHPSSQPDCPPEVAK*TLPITYL 723
P R+ S CPPE+ K + + ++
Sbjct: 467 PVLRSPPAFSHSRCPPEIHKSCICVRFI 494
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +1
Query: 640 PAFRAAHPSSQPDCPPEVAK*TLPITYL 723
P R+ S CPPE+ K + + ++
Sbjct: 467 PVLRSPPAFSHSRCPPEIHKSCICVRFI 494
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI + ++P+P+
Sbjct: 331 YKPLYYNINYIEQIPVPV 348
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI + ++P+P+
Sbjct: 331 YKPLYYNINYIEQIPVPV 348
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI + ++P+P+
Sbjct: 331 YKPLYYNINYIEQIPVPV 348
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 488 YRPLPENIVLVMRLPLPI 541
Y+PL NI + ++P+P+
Sbjct: 320 YKPLYYNINYIEQIPVPV 337
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 436 PSFSPHQHKLAQ 401
PS+ PHQH +Q
Sbjct: 314 PSYHPHQHHPSQ 325
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,680
Number of Sequences: 438
Number of extensions: 4612
Number of successful extensions: 31
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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