Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1g02
         (444 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235...    27   5.1  
01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-33...    27   5.1  
03_06_0460 - 34098115-34098622,34098981-34099355,34100939-341011...    27   9.0  

>03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,
            2353031-2353708,2353800-2353964,2354139-2354433,
            2354581-2354795,2354885-2355190,2355269-2355332,
            2355426-2355665,2355783-2355886
          Length = 1505

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 12/53 (22%), Positives = 25/53 (47%)
 Frame = +2

Query: 11   LGNTQDSTLQR*SPL*LFYVFSWHLCMLXIPTSLTTFWRSXFTXASSSPITTV 169
            LG    +T+Q    + +    +W + +L +P ++   W   +  ASS  +T +
Sbjct: 1059 LGGFASTTIQLLGIVAVMSKVTWQVLILIVPMAVACMWMQRYYIASSRELTRI 1111


>01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-336498,
            336577-336734,337180-337310,337385-337472,337587-337690,
            338346-338444,339060-339116,339262-339337,339519-339602,
            339969-340010,340128-340198,341516-341564,342370-342441,
            343149-343286,343393-343473,344166-344353,344591-345188,
            345274-345342,346729-346854,347048-347175,347986-348142,
            348342-348388,348472-348535,348691-348765,349292-349414,
            349797-349982,351179-351303,351390-351459,351974-352101,
            352585-352726,353065-353163,353239-353285,353598-353652,
            353758-353967,354686-354757,354836-354905,355231-355414,
            355521-355644,355732-355863,356252-356317,356805-356852,
            357572-357676,357728-357865,358097-358399,358482-358594,
            359082-359148,359236-359310,359395-359517,359610-359618,
            360156-360320,360401-360502,361545-361696,361794-361995,
            362079-362126,362215-362298,362613-362657,363302-363385,
            363890-363970,364044-364133,364217-364279,364824-364841,
            365238-365378,365494-365550,366091-366185,366275-366383,
            367067-367156,367308-367387,367480-367558,367742-367903,
            368005-368136,368335-368469,368553-368618,369317-369457,
            369575-369648,369685-369910
          Length = 2905

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 131  CSSRXSLGTSEXAAYRDATKRHRITIAGFIFGASS 27
            C S   LG        D  K+H ++I GF+   SS
Sbjct: 1142 CESLLQLGEISEPERDDLIKKHMVSIVGFLLSVSS 1176


>03_06_0460 -
           34098115-34098622,34098981-34099355,34100939-34101156,
           34101235-34101297
          Length = 387

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 113 LGTSEXAAYRDATKRHRITIAGFIFGAS 30
           +G ++ A+Y  +T R  + +AG + GAS
Sbjct: 284 VGAADAASYCGSTSRRMVQVAGEVLGAS 311


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,007,854
Number of Sequences: 37544
Number of extensions: 127612
Number of successful extensions: 292
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)