Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1f15
(707 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 32 0.092
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 0.28
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 29 0.49
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.65
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 29 0.86
SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subuni... 28 1.1
SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 1.5
SPBC2G2.09c |crs1|mug17|meiosis specific cyclin Crs1|Schizosacch... 28 1.5
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 2.0
SPAC513.02 |||phosphoglycerate mutase family|Schizosaccharomyces... 27 2.6
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar... 27 3.5
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 27 3.5
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 4.6
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 26 6.1
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 26 6.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 8.0
SPAC23C4.06c |||methyltransferase |Schizosaccharomyces pombe|chr... 25 8.0
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 31.9 bits (69), Expect = 0.092
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 485 SESDSLPALSLENSSATVEHSLLQDKSSGTDAHGSSENSRTETFKQPVFITSTMENSNNA 664
S S++LP ++SSA V + L + + +S TFK+PVF+ S + S+N+
Sbjct: 6 STSETLPKQESKSSSAPVSNFLSPNNLTEQTCSPLRAHS---TFKEPVFLLSQRQYSHNS 62
Query: 665 VDSVPLFRDVRLP 703
L V+ P
Sbjct: 63 KILTELINSVKRP 75
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.28
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +2
Query: 368 TSKHCETAEPESSTRNIDSTDNIAVKIFGLDLEICTKVNSESDSLPALSLENSSATVEHS 547
+S ++E ESS+ + DS+ + + E +S SDS S ++S ++ S
Sbjct: 218 SSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSS 277
Query: 548 LLQDKSSG----TDAHGSSENSRTETFKQPVFITSTMENSNNAVDS 673
+D SS +++ SSE+S + + +S+ E+ N+ D+
Sbjct: 278 DSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDT 323
Score = 28.7 bits (61), Expect = 0.86
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +2
Query: 347 SVARTNVTSKHCETAEPESSTRNIDSTDNIAVKIFGLDLEICTKVNSE-SDSLPALSLEN 523
S + N +S +E ESS+ + DS+ + + D E ++ +SE SDS + S
Sbjct: 121 SSSEDNDSSSSSSDSESESSSEDSDSSSSSS------DSE--SESSSEGSDSSSSSSSSE 172
Query: 524 SSATVEHSLLQDKSSGTDAHGSSENSRTETFKQPVFITSTMENSNNAVDS 673
S ++ E + SS +++ SSE+S + + S+ E S+++ S
Sbjct: 173 SESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSS 222
Score = 27.9 bits (59), Expect = 1.5
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 347 SVARTNVTSKHCETAEPESSTRNIDSTDNIAVKIFGLDLEICTKVNSE-SDSLPALSLEN 523
S + N +S +E ESS+ + DS+ + + D E ++ +SE SDS + S
Sbjct: 175 SSSEDNDSSSSSSDSESESSSEDSDSSSSSS------DSE--SESSSEGSDSSSSSSSSE 226
Query: 524 SSATVEHSLLQDKSSGTDAHGSSENSRTETFKQPVFITSTMENSNNAVDS 673
S ++ E + SS +++ SSE+S + + S+ ++S+++ +S
Sbjct: 227 SESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNS 276
Score = 27.5 bits (58), Expect = 2.0
Identities = 25/102 (24%), Positives = 50/102 (49%)
Frame = +2
Query: 368 TSKHCETAEPESSTRNIDSTDNIAVKIFGLDLEICTKVNSESDSLPALSLENSSATVEHS 547
+S ++E ESS+ + DS+ + + D E + +SDS + S S ++ E S
Sbjct: 164 SSSSSSSSESESSSEDNDSSSSSS------DSE-SESSSEDSDSSSSSSDSESESSSEGS 216
Query: 548 LLQDKSSGTDAHGSSENSRTETFKQPVFITSTMENSNNAVDS 673
SS +++ SSE++ + + S+ E+S+++ S
Sbjct: 217 DSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSS 258
Score = 26.6 bits (56), Expect = 3.5
Identities = 26/111 (23%), Positives = 53/111 (47%)
Frame = +2
Query: 341 ELSVARTNVTSKHCETAEPESSTRNIDSTDNIAVKIFGLDLEICTKVNSESDSLPALSLE 520
E S + ++ ++E ESS+ + DS+ + + D E + +SDS + S
Sbjct: 101 EASGSGSSSDESDSSSSESESSSEDNDSSSSSS------DSE-SESSSEDSDSSSSSSDS 153
Query: 521 NSSATVEHSLLQDKSSGTDAHGSSENSRTETFKQPVFITSTMENSNNAVDS 673
S ++ E S SS +++ SSE++ + + S+ E+S+++ S
Sbjct: 154 ESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSS 204
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 29.5 bits (63), Expect = 0.49
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +2
Query: 398 ESSTRNIDSTDNIAVKIFGLDLEICTKVNSESDSLPALSLENSSATVEHSLLQDKSSGTD 577
E T D+ D+ KI L+ + + S ++ P E + + + G+
Sbjct: 29 EKGTGRKDAEDHTPSKITDLEKNVDHSIPSFPENDPKNYSEFVNLNPPKRPDLEHTRGSS 88
Query: 578 AHGSSEN------SRTETFKQPVFITSTMENSNNAVDSVPLFRDVR 697
H +SEN + + + P FIT TME+ N V+ PL RD R
Sbjct: 89 WHTASENVNDLAANDSTRVQTPEFITQTMEDEN--VEVPPLERDER 132
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 0.65
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +2
Query: 476 KVNSESDSLPALSLENSSATVEHSLLQDKSSGTDAHGSSENSRTETFKQPVFITSTMENS 655
+ S + S+P ++++SS T + + SS T + GSS++S T TST++ +
Sbjct: 255 ETKSSTSSVPTQTIDSSSFT-SSTPVSLTSSSTSSSGSSQDSTTIDSTPSTIATSTLQPT 313
Query: 656 NNA 664
++
Sbjct: 314 TSS 316
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 28.7 bits (61), Expect = 0.86
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 368 TSKHCETAEPESSTRNIDSTDNIAVKIFGLDLEICTKVNSESDSLPALSLENSSATVEHS 547
+S+H T+ E+ T+ I ++ VK+FG D +K + ++ LP S S
Sbjct: 56 SSRHPLTSIKENDTQTIGRRPSMRVKLFGKDK---SKASMSTNDLP-------SHPRSQS 105
Query: 548 LLQDKSSGTDAHGSSENSRTETFK 619
++ SS + G+S +SRT K
Sbjct: 106 VMGFSSSTSQLTGTSNSSRTRLNK 129
>SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subunit
Rpa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1227
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = -3
Query: 549 RLCSTVAEEFSSDNAGRESLSELTLVHISKSKPKILTAILSVESIFLVL 403
R+ VAE+ + GR L ++ LVH+ ++K K + + ++ ++
Sbjct: 365 RVVLGVAEDLTDVEVGRFLLQKVVLVHLREAKDKFRLLLFMIRKLYALV 413
>SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 27.9 bits (59), Expect = 1.5
Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 2/140 (1%)
Frame = +2
Query: 218 SLYERYMRSFKVANPLPEPKSSFGTGEHXXXXXXXXXXGNIELSVARTNVTSKHCETAEP 397
+L +R S ++ + ++ +G+ +IEL + + T E
Sbjct: 47 ALIKRKQLSHSTSSDITRHSNAKNSGKDTQFYEEPSSKQDIELHKLHEKLRNGQITTKEY 106
Query: 398 ESSTRNIDSTDNIAVKIFGLDLEICTKVNSESDSLPALSLENSSATV--EHSLLQDKSSG 571
++ + N + GLD ++ KV S +L L +S V E L +K +
Sbjct: 107 SEKSKELGGDLNTTHLVRGLDRKLLEKVRSNELALDDSLLSSSEKEVDEEADKLLEKVAE 166
Query: 572 TDAHGSSENSRTETFKQPVF 631
+H S + E K P++
Sbjct: 167 ESSHPESVSILEEKKKIPLY 186
>SPBC2G2.09c |crs1|mug17|meiosis specific cyclin
Crs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 229
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 380 CETAEPESSTRNIDSTDNIAVKIFGLDLEICTKVNSESDSLPAL 511
CE P ST+N++ + I + + D+ + + + ES P +
Sbjct: 155 CENLAPSLSTKNLEKYEKIVLALLNFDIYVISLPSVESFLTPLI 198
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 2.0
Identities = 22/91 (24%), Positives = 45/91 (49%)
Frame = +2
Query: 341 ELSVARTNVTSKHCETAEPESSTRNIDSTDNIAVKIFGLDLEICTKVNSESDSLPALSLE 520
E S + + +S E++ ES + + +S+ + + + + E + +SES S + S E
Sbjct: 90 ESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSS-SSESEE 148
Query: 521 NSSATVEHSLLQDKSSGTDAHGSSENSRTET 613
A V+ ++ SS + + SS S +E+
Sbjct: 149 EEEAVVKIEEKKESSSDSSSESSSSESESES 179
>SPAC513.02 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 437 AVKIFGLDLEICTKVNSESDSLPALSLENSSATVEH 544
AV G+D+ + K+ DSL A+ E+S + +H
Sbjct: 162 AVVTHGVDIRLFQKIQKPEDSLDAVPKEHSFSPCQH 197
>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 768
Score = 26.6 bits (56), Expect = 3.5
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 371 SKHCETAEPESSTRNIDS-TDNIAVKIFGLDLEICTKVNSESDS-LPALSLENS--SATV 538
S+H E ++ S ++N+D + + K+ + L +K N+ D+ + EN+ S
Sbjct: 39 SEHVEVSQSSSDSKNVDGRSTSEKRKVESVKLVDESKHNNHDDTGTQNVERENNIVSEAK 98
Query: 539 EHSLLQDKSSGTDAHGSSENSRTET 613
+ L SS +DA S+ +S T
Sbjct: 99 KQKTLGSSSSSSDAVSSNNDSGAST 123
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 485 SESDSLPALSLENSSATVEHSLLQDKSSGTDAHGSSENSRTETFKQPVFITSTMENSNN 661
SESDS + S + S + + S D SSG ++ ++ S ++T S N+ N
Sbjct: 263 SESDSSSSESSSSVSDSSDLSSTSDSSSGDESSDTARQSSSDTISSNNVSVSVSLNTAN 321
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 4.6
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 335 NIELSVARTNVTSKHCETAEPESSTRNIDST-DNIAVKIFGL--DLEICTKVNSE-SDSL 502
N+E ++ + H + A+ ESS + +T D++ +I L DL + SE SD +
Sbjct: 804 NLESKLSSLQQDNFHMK-AQIESSNQEYTATVDSMNSRILELSNDLRVANSKLSECSDDV 862
Query: 503 PALSLENSSATVEHSLL 553
L+L+NS EH L
Sbjct: 863 RRLTLQNSFDLREHQTL 879
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 6.1
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = +2
Query: 377 HCETAEPESSTRNIDSTDNIAVKIFGLDLEICTKVNSESDSLPALSLENSSATVEHSLLQ 556
H +A P SS+ + A + ++ +S S+P + S A+ +HS +
Sbjct: 83 HSNSAAPASSSPTSATLSTAAHPVHTNAAQVAGSSSSYVYSVPPTNSTTSQASAKHSAVP 142
Query: 557 DKS----SGTDAHGSSENSRTETFKQPVFITSTMENSNNAVDSV 676
+S S T ++++S T+ ST +S+NA ++V
Sbjct: 143 HRSSQFQSTTLTPSTTDSSSTDVSSSD--SVSTSASSSNASNTV 184
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.8 bits (54), Expect = 6.1
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +2
Query: 461 LEICTKVNSESDSLPALSLENSSATVEHSLLQDKSSGTDAHGSSENSRTETFKQPVFITS 640
+E +K +S +L +L +SSAT + + D+S G S +S+ + F+ +
Sbjct: 1 MESQSKKSSALKTLSSLWNGSSSATSDPVTVLDRSRTHHHRGRSTSSKAQPFR----LDD 56
Query: 641 TMENSNNAVDSVPLFRDVRLPE 706
++ + D + L R + PE
Sbjct: 57 SVYSDQPPKDHISLARSITRPE 78
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 8.0
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 362 NVTSKHCETAEP-ESSTRNIDSTDNIAVKIFGLDLEICTK-----VNSESDSLPALSLEN 523
+ + K T EP +S N + + + +D+++ + V ES+ + + SL+N
Sbjct: 42 STSRKEQSTIEPMDSFVENNIANSSSQQSVSEIDIQLPSSEPKEGVKEESNLIESNSLDN 101
Query: 524 SSATVEHSLLQDKSSGTDAHGSSEN 598
+ + DKS+ T+ S++N
Sbjct: 102 VQEINPQNTIGDKSAHTEEESSNDN 126
>SPAC23C4.06c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 620 QPVFITSTMENSNNAVDSVPLFRDVRLP 703
Q + +T +EN N+ VDS+ + D LP
Sbjct: 85 QQIQLTLHLENQNSIVDSIHINADTVLP 112
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,674,184
Number of Sequences: 5004
Number of extensions: 53106
Number of successful extensions: 201
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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