Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1f06
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting... 395 e-109
BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting... 326 4e-89
AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2 s... 326 4e-89
AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens ... 326 4e-89
X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase pr... 278 2e-74
BC020880-1|AAH20880.1| 293|Homo sapiens F-box protein 6 protein. 32 2.0
AL031731-6|CAI20214.1| 293|Homo sapiens F-box protein 6 protein. 32 2.0
AF233223-1|AAF67153.1| 293|Homo sapiens F-box protein FBG2 prot... 32 2.0
>BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d1 protein.
Length = 351
Score = 395 bits (972), Expect = e-109
Identities = 179/222 (80%), Positives = 201/222 (90%)
Frame = +1
Query: 112 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 291
FN+D GYLEGL RG K G+L Q+DYLNLVQCETLEDLKLHLQ TDYG FLANE SPL+VS
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVS 68
Query: 292 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 471
IDD+L+EK+V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PK
Sbjct: 69 VIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPK 128
Query: 472 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 651
CHPLGSFEQMEA+++A TPAELYNA+LVDTPLA FF DCISEQDLDEMNIEIIRNTLYKA
Sbjct: 129 CHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKA 188
Query: 652 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGT 777
YLE+FY FC +GGTTAD MC IL FEADRRA IITINSFGT
Sbjct: 189 YLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGT 230
>BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d2 protein.
Length = 350
Score = 326 bits (802), Expect = 4e-89
Identities = 144/222 (64%), Positives = 183/222 (82%)
Frame = +1
Query: 112 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 291
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 292 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 471
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 472 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 651
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE LDE+NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 652 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGT 777
YLEAFY FCK G TA+VMC IL FEADRRA IIT+NSFGT
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGT 230
>AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2
subunit protein.
Length = 350
Score = 326 bits (802), Expect = 4e-89
Identities = 144/222 (64%), Positives = 183/222 (82%)
Frame = +1
Query: 112 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 291
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 292 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 471
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 472 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 651
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE LDE+NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 652 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGT 777
YLEAFY FCK G TA+VMC IL FEADRRA IIT+NSFGT
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGT 230
>AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38708 fis, clone KIDNE2002872, moderately
similar to Mus musculus Ac39/physophilin mRNA. ).
Length = 350
Score = 326 bits (802), Expect = 4e-89
Identities = 144/222 (64%), Positives = 183/222 (82%)
Frame = +1
Query: 112 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 291
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 292 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 471
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 472 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 651
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE LDE+NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 652 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGT 777
YLEAFY FCK G TA+VMC IL FEADRRA IIT+NSFGT
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGT 230
>X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase
protein.
Length = 274
Score = 278 bits (681), Expect = 2e-74
Identities = 125/153 (81%), Positives = 141/153 (92%)
Frame = +1
Query: 319 LVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQ 498
+V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PKCHPLGSFEQ
Sbjct: 1 MVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQ 60
Query: 499 MEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYDFC 678
MEA+++A TPAELYNA+LVDTPLA FF DCISEQDLDEMNIEIIRNTLYKAYLE+FY FC
Sbjct: 61 MEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 120
Query: 679 KQIGGTTADVMCEILAFEADRRAIIITINSFGT 777
+GGTTAD MC IL FEADRRA IITINSFGT
Sbjct: 121 TLLGGTTADAMCPILEFEADRRAFIITINSFGT 153
>BC020880-1|AAH20880.1| 293|Homo sapiens F-box protein 6 protein.
Length = 293
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 58 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 237
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 238 GTDYGTFLANEPSPLSV 288
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
>AL031731-6|CAI20214.1| 293|Homo sapiens F-box protein 6 protein.
Length = 293
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 58 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 237
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 238 GTDYGTFLANEPSPLSV 288
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
>AF233223-1|AAF67153.1| 293|Homo sapiens F-box protein FBG2
protein.
Length = 293
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 58 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 237
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 238 GTDYGTFLANEPSPLSV 288
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,931,666
Number of Sequences: 237096
Number of extensions: 2474040
Number of successful extensions: 4769
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4769
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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