Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1f06
         (780 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069530-1|AAL39675.1|  350|Drosophila melanogaster LD24653p pro...   450   e-126
AE014298-571|AAF45902.1|  350|Drosophila melanogaster CG2934-PA ...   450   e-126
AY118615-1|AAM49984.1|  350|Drosophila melanogaster LP10945p pro...   253   2e-67
AE014297-3283|AAF56104.1|  350|Drosophila melanogaster CG4624-PA...   252   5e-67
AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase...    30   4.1  
BT016104-1|AAV36989.1| 1377|Drosophila melanogaster LD21943p pro...    29   7.2  
AL009147-1|CAA15636.2| 1385|Drosophila melanogaster EG:171D11.6 ...    29   7.2  
AE014298-40|AAG22361.3| 1377|Drosophila melanogaster CG18273-PA ...    29   7.2  
AY069334-1|AAL39479.1|  629|Drosophila melanogaster LD04957p pro...    29   9.5  
AE013599-33|EAA45994.1|  629|Drosophila melanogaster CG17082-PF,...    29   9.5  
AE013599-32|EAA45995.1|  629|Drosophila melanogaster CG17082-PE,...    29   9.5  
AE013599-31|EAA45990.1|  629|Drosophila melanogaster CG17082-PD,...    29   9.5  
AE013599-30|EAA45993.1|  629|Drosophila melanogaster CG17082-PB,...    29   9.5  
AE013599-29|EAA45992.1|  629|Drosophila melanogaster CG17082-PA,...    29   9.5  
AE013599-28|EAA45991.2|  665|Drosophila melanogaster CG17082-PC,...    29   9.5  

>AY069530-1|AAL39675.1|  350|Drosophila melanogaster LD24653p
           protein.
          Length = 350

 Score =  450 bits (1108), Expect = e-126
 Identities = 210/225 (93%), Positives = 218/225 (96%)
 Frame = +1

Query: 103 GCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPL 282
           G +FNID GYLEGLCRGFKCGILKQ+DYLNLVQCETLEDLKLHLQGTDYG+FLANEPSPL
Sbjct: 5   GFMFNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPL 64

Query: 283 SVSTIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISEL 462
           SVS IDDKLREKLVIEFQH+RNH+VEPLS FLDFITY YMIDNIILLITGTLHQRPISEL
Sbjct: 65  SVSVIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISEL 124

Query: 463 IPKCHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTL 642
           IPKCHPLGSFEQMEAIHVA+TPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTL
Sbjct: 125 IPKCHPLGSFEQMEAIHVASTPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTL 184

Query: 643 YKAYLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGT 777
           YKAYLEAFY+FCK +GG TADVMCEILAFEADRRAIIITINSFGT
Sbjct: 185 YKAYLEAFYNFCKNMGGATADVMCEILAFEADRRAIIITINSFGT 229


>AE014298-571|AAF45902.1|  350|Drosophila melanogaster CG2934-PA
           protein.
          Length = 350

 Score =  450 bits (1108), Expect = e-126
 Identities = 210/225 (93%), Positives = 218/225 (96%)
 Frame = +1

Query: 103 GCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPL 282
           G +FNID GYLEGLCRGFKCGILKQ+DYLNLVQCETLEDLKLHLQGTDYG+FLANEPSPL
Sbjct: 5   GFMFNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPL 64

Query: 283 SVSTIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISEL 462
           SVS IDDKLREKLVIEFQH+RNH+VEPLS FLDFITY YMIDNIILLITGTLHQRPISEL
Sbjct: 65  SVSVIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISEL 124

Query: 463 IPKCHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTL 642
           IPKCHPLGSFEQMEAIHVA+TPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTL
Sbjct: 125 IPKCHPLGSFEQMEAIHVASTPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTL 184

Query: 643 YKAYLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGT 777
           YKAYLEAFY+FCK +GG TADVMCEILAFEADRRAIIITINSFGT
Sbjct: 185 YKAYLEAFYNFCKNMGGATADVMCEILAFEADRRAIIITINSFGT 229


>AY118615-1|AAM49984.1|  350|Drosophila melanogaster LP10945p
           protein.
          Length = 350

 Score =  253 bits (620), Expect = 2e-67
 Identities = 115/223 (51%), Positives = 160/223 (71%)
 Frame = +1

Query: 109 IFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSV 288
           IFN + GYLE L RGFK G+LK SDYLNL QCE+LED+ + +QGTDYG     E S  SV
Sbjct: 4   IFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSAPSV 63

Query: 289 STIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIP 468
             I+  LR++L+ ++ ++R+HS EPL+TF+DFI Y +MIDN+ LL+ G  + R +  L+ 
Sbjct: 64  EVIERCLRDRLLQQYYYIRSHSTEPLTTFMDFIRYPFMIDNVALLVAGLNNHRSMKRLLR 123

Query: 469 KCHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYK 648
            CHPLG F+Q+ AI VA+  AEL++AVL+DTP+A F    +  + L  +++EI+R  LY+
Sbjct: 124 MCHPLGEFDQLGAIEVASNSAELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAHLYR 183

Query: 649 AYLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGT 777
           AYLE FY +C Q+GG TA+VM  +L+FEADRR I I +N+ G+
Sbjct: 184 AYLEKFYAYCSQLGGNTANVMTNLLSFEADRRTITIAVNAIGS 226


>AE014297-3283|AAF56104.1|  350|Drosophila melanogaster CG4624-PA
           protein.
          Length = 350

 Score =  252 bits (616), Expect = 5e-67
 Identities = 114/223 (51%), Positives = 160/223 (71%)
 Frame = +1

Query: 109 IFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSV 288
           IFN + GYLE L RGFK G+LK SDYLNL QCE+LED+ + +QGTDYG     E S  SV
Sbjct: 4   IFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSAPSV 63

Query: 289 STIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIP 468
             I+  LR++L+ ++ ++R+HS EPL+TF++FI Y +MIDN+ LL+ G  + R +  L+ 
Sbjct: 64  EVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKRLLR 123

Query: 469 KCHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYK 648
            CHPLG F+Q+ AI VA+  AEL++AVL+DTP+A F    +  + L  +++EI+R  LY+
Sbjct: 124 MCHPLGEFDQLGAIEVASNSAELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAHLYR 183

Query: 649 AYLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGT 777
           AYLE FY +C Q+GG TA+VM  +L+FEADRR I I +N+ G+
Sbjct: 184 AYLEKFYAYCSQLGGNTANVMTNLLSFEADRRTITIAVNAIGS 226


>AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase
            protein.
          Length = 1924

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -3

Query: 622  QYSFHPSLVR*CNPQRMAPMVCPPTQHCKVQLVLQLHE*LPSAQMSLMDGTLELTP 455
            Q+S  PS    C P ++ P+V P  +  K +  LQL +      + LMD   +  P
Sbjct: 938  QHSLAPSAALHCLPDKLNPVVKPLMESIKREQCLQLQQLSAEFLVHLMDQVCDRNP 993


>BT016104-1|AAV36989.1| 1377|Drosophila melanogaster LD21943p protein.
          Length = 1377

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +1

Query: 265  NEPSPLSVSTIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLI 426
            N   PL+  ++D  L   L I+ +HL +H       F+D   YS + DN+I+L+
Sbjct: 1179 NRTVPLTGESLDCLLSSMLDIDIKHLISHG-GSWQQFVDL--YSALTDNLIVLL 1229


>AL009147-1|CAA15636.2| 1385|Drosophila melanogaster EG:171D11.6
            protein.
          Length = 1385

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +1

Query: 265  NEPSPLSVSTIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLI 426
            N   PL+  ++D  L   L I+ +HL +H       F+D   YS + DN+I+L+
Sbjct: 1179 NRTVPLTGESLDCLLSSMLDIDIKHLISHG-GSWQQFVDL--YSALTDNLIVLL 1229


>AE014298-40|AAG22361.3| 1377|Drosophila melanogaster CG18273-PA
            protein.
          Length = 1377

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +1

Query: 265  NEPSPLSVSTIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLI 426
            N   PL+  ++D  L   L I+ +HL +H       F+D   YS + DN+I+L+
Sbjct: 1179 NRTVPLTGESLDCLLSSMLDIDIKHLISHG-GSWQQFVDL--YSALTDNLIVLL 1229


>AY069334-1|AAL39479.1|  629|Drosophila melanogaster LD04957p
           protein.
          Length = 629

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 457 ELIPKCHPLGSFEQMEAIHVAA--TPAELYNAVLVDTPLAPFFVDCISEQDLDEMNI 621
           +L  +CH L S +QM A+ +     P E  N +     L  FF   I+ +D+++MN+
Sbjct: 462 QLFYQCHTLPSIDQMNALSILCHLLPPENRNTL---RSLLSFFNIIINLKDINKMNV 515


>AE013599-33|EAA45994.1|  629|Drosophila melanogaster CG17082-PF,
           isoform F protein.
          Length = 629

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 457 ELIPKCHPLGSFEQMEAIHVAA--TPAELYNAVLVDTPLAPFFVDCISEQDLDEMNI 621
           +L  +CH L S +QM A+ +     P E  N +     L  FF   I+ +D+++MN+
Sbjct: 462 QLFYQCHTLPSIDQMNALSILCHLLPPENRNTL---RSLLSFFNIIINLKDINKMNV 515


>AE013599-32|EAA45995.1|  629|Drosophila melanogaster CG17082-PE,
           isoform E protein.
          Length = 629

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 457 ELIPKCHPLGSFEQMEAIHVAA--TPAELYNAVLVDTPLAPFFVDCISEQDLDEMNI 621
           +L  +CH L S +QM A+ +     P E  N +     L  FF   I+ +D+++MN+
Sbjct: 462 QLFYQCHTLPSIDQMNALSILCHLLPPENRNTL---RSLLSFFNIIINLKDINKMNV 515


>AE013599-31|EAA45990.1|  629|Drosophila melanogaster CG17082-PD,
           isoform D protein.
          Length = 629

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 457 ELIPKCHPLGSFEQMEAIHVAA--TPAELYNAVLVDTPLAPFFVDCISEQDLDEMNI 621
           +L  +CH L S +QM A+ +     P E  N +     L  FF   I+ +D+++MN+
Sbjct: 462 QLFYQCHTLPSIDQMNALSILCHLLPPENRNTL---RSLLSFFNIIINLKDINKMNV 515


>AE013599-30|EAA45993.1|  629|Drosophila melanogaster CG17082-PB,
           isoform B protein.
          Length = 629

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 457 ELIPKCHPLGSFEQMEAIHVAA--TPAELYNAVLVDTPLAPFFVDCISEQDLDEMNI 621
           +L  +CH L S +QM A+ +     P E  N +     L  FF   I+ +D+++MN+
Sbjct: 462 QLFYQCHTLPSIDQMNALSILCHLLPPENRNTL---RSLLSFFNIIINLKDINKMNV 515


>AE013599-29|EAA45992.1|  629|Drosophila melanogaster CG17082-PA,
           isoform A protein.
          Length = 629

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 457 ELIPKCHPLGSFEQMEAIHVAA--TPAELYNAVLVDTPLAPFFVDCISEQDLDEMNI 621
           +L  +CH L S +QM A+ +     P E  N +     L  FF   I+ +D+++MN+
Sbjct: 462 QLFYQCHTLPSIDQMNALSILCHLLPPENRNTL---RSLLSFFNIIINLKDINKMNV 515


>AE013599-28|EAA45991.2|  665|Drosophila melanogaster CG17082-PC,
           isoform C protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 457 ELIPKCHPLGSFEQMEAIHVAA--TPAELYNAVLVDTPLAPFFVDCISEQDLDEMNI 621
           +L  +CH L S +QM A+ +     P E  N +     L  FF   I+ +D+++MN+
Sbjct: 498 QLFYQCHTLPSIDQMNALSILCHLLPPENRNTL---RSLLSFFNIIINLKDINKMNV 551


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,222,965
Number of Sequences: 53049
Number of extensions: 770483
Number of successful extensions: 1888
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1888
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)