Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1e13
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3249|AAF49092.1|  460|Drosophila melanogaster CG7809-PA...   360   e-99 
BT023838-1|AAZ86759.1|  455|Drosophila melanogaster LD13915p pro...    30   3.9  
AE013599-2015|AAF58167.1|  441|Drosophila melanogaster CG8090-PA...    30   3.9  
BT014631-1|AAT27255.1|  890|Drosophila melanogaster SD09860p pro...    29   5.2  
AE014298-2844|AAF48957.1|  890|Drosophila melanogaster CG12202-P...    29   5.2  

>AE014296-3249|AAF49092.1|  460|Drosophila melanogaster CG7809-PA
           protein.
          Length = 460

 Score =  360 bits (886), Expect = e-99
 Identities = 158/212 (74%), Positives = 187/212 (88%)
 Frame = +2

Query: 101 MGSSHSTEVPGGGTEGYHVLRVQEGSPGQKANLEAFFDFILAIETTRLDQDNDTLKELLK 280
           MGSSHS  VPGGGTEGYHVL+VQ+ SPGQKA LEAFFDFI+AI  TRLDQDND LKELL+
Sbjct: 1   MGSSHSIHVPGGGTEGYHVLKVQDNSPGQKAGLEAFFDFIVAIAGTRLDQDNDMLKELLR 60

Query: 281 NNVDKPIKMLIYSSKTQSVREVMITPSANWGGQGLLGVSIRFCSFEGANENVWHVLEVHP 460
            NVDKP+++ +YSSKTQ+VRE+ +TPS NWGGQGLLGVSIRFCSFEGANE+VWH+LEVHP
Sbjct: 61  QNVDKPVRLTVYSSKTQTVRELTLTPSNNWGGQGLLGVSIRFCSFEGANESVWHILEVHP 120

Query: 461 SSPAELAGLRPFSDYIIGSDSILHESEDLFTLIEAHEGRALKLYVYNANDDTCREVLITP 640
           +SPAELAGLR +SDY+IG+D+I HE++DLFTLIE HE + LK+YVYN +DD CREV I P
Sbjct: 121 NSPAELAGLRAYSDYVIGADAIRHENDDLFTLIETHEQQPLKMYVYNLDDDACREVTIKP 180

Query: 641 NHNWGGDGSLGCGIGYGYLHRIPIRHSPPTNS 736
           N  WGG+G+LGCGIG+GYLHRIP++  P T+S
Sbjct: 181 NTAWGGEGALGCGIGFGYLHRIPVQAEPVTSS 212


>BT023838-1|AAZ86759.1|  455|Drosophila melanogaster LD13915p
           protein.
          Length = 455

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 482 QLVLLEMMDVLPIHATHFHWRL 417
           +L++ E++DVL   + +FHWRL
Sbjct: 56  ELIIFEIIDVLESSSRYFHWRL 77


>AE013599-2015|AAF58167.1|  441|Drosophila melanogaster CG8090-PA
           protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 482 QLVLLEMMDVLPIHATHFHWRL 417
           +L++ E++DVL   + +FHWRL
Sbjct: 42  ELIIFEIIDVLESSSRYFHWRL 63


>BT014631-1|AAT27255.1|  890|Drosophila melanogaster SD09860p
           protein.
          Length = 890

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = +2

Query: 392 VSIRFCSFEGANENVWHVLEVHPSSPAELAGLRPFSDYIIG----SDSILHESEDLFTLI 559
           + I+    EG  E   H+  + PS  A   G    S +++G    ++SIL       T I
Sbjct: 124 LQIQMRDLEGYKETRHHLFTLRPSQHASWIGFA-MSYHLLGDYDMANSILETFSQSQTSI 182

Query: 560 EAHEGRALKLYVY 598
           EAH+ R  +L +Y
Sbjct: 183 EAHDYRHSELLLY 195


>AE014298-2844|AAF48957.1|  890|Drosophila melanogaster CG12202-PA
           protein.
          Length = 890

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = +2

Query: 392 VSIRFCSFEGANENVWHVLEVHPSSPAELAGLRPFSDYIIG----SDSILHESEDLFTLI 559
           + I+    EG  E   H+  + PS  A   G    S +++G    ++SIL       T I
Sbjct: 124 LQIQMRDLEGYKETRHHLFTLRPSQHASWIGFA-MSYHLLGDYDMANSILETFSQSQTSI 182

Query: 560 EAHEGRALKLYVY 598
           EAH+ R  +L +Y
Sbjct: 183 EAHDYRHSELLLY 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,999,886
Number of Sequences: 53049
Number of extensions: 747076
Number of successful extensions: 2643
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2633
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)