Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1e12
(763 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 25 0.77
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 25 0.77
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 25 0.77
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 1.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 5.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 5.4
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 22 7.1
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 25.0 bits (52), Expect = 0.77
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 253 LRVRILLLVQVPSSSDPQEL-SIVTGAVEH*DYNVQDNFECLHDYSRYSLNGNHFK 89
L I+L+ P S + +I + H D + + F+CL D R + GN K
Sbjct: 10 LMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELK 65
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 25.0 bits (52), Expect = 0.77
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 253 LRVRILLLVQVPSSSDPQEL-SIVTGAVEH*DYNVQDNFECLHDYSRYSLNGNHFK 89
L I+L+ P S + +I + H D + + F+CL D R + GN K
Sbjct: 10 LMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELK 65
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 25.0 bits (52), Expect = 0.77
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 253 LRVRILLLVQVPSSSDPQEL-SIVTGAVEH*DYNVQDNFECLHDYSRYSLNGNHFK 89
L I+L+ P S + +I + H D + + F+CL D R + GN K
Sbjct: 10 LMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELK 65
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 24.2 bits (50), Expect = 1.3
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 152 NIIILVLYRTGYNGEFLGVGGTW--NLNEEKNPDAEIVASGVIVGYLI 289
NI+ L L TG GVG NL + NP+ IV SG+ Y++
Sbjct: 814 NILFLDL-STGKVEMITGVGKATSPNLTKWGNPNRPIVQSGIFGKYMV 860
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 227 NEEKNPDAEIVASGVIVGYLIY 292
+E++ P A++ ASG + +L+Y
Sbjct: 395 HEQQKPVADVAASGPGLAFLVY 416
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = -1
Query: 130 HDYSRYSLNGNHFK*DINTLKYHKLSLLKTVPV 32
+ YS Y+ N++ + L+Y+ + ++ +PV
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = -1
Query: 130 HDYSRYSLNGNHFK*DINTLKYHKLSLLKTVPV 32
+ YS Y+ N++ + L+Y+ + ++ +PV
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = -1
Query: 130 HDYSRYSLNGNHFK*DINTLKYHKLSLLKTVPV 32
+ YS Y+ N++ + L+Y+ + ++ +PV
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = -1
Query: 130 HDYSRYSLNGNHFK*DINTLKYHKLSLLKTVPV 32
+ YS Y+ N++ + L+Y+ + ++ +PV
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = -1
Query: 130 HDYSRYSLNGNHFK*DINTLKYHKLSLLKTVPV 32
+ YS Y+ N++ + L+Y+ + ++ +PV
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = -1
Query: 130 HDYSRYSLNGNHFK*DINTLKYHKLSLLKTVPV 32
+ YS Y+ N++ + L+Y+ + ++ +PV
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = -1
Query: 130 HDYSRYSLNGNHFK*DINTLKYHKLSLLKTVPV 32
+ YS Y+ N++ + L+Y+ + ++ +PV
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -1
Query: 397 HRNP*EHSDEVHHDLRQSAFVLRGTKQECDDLH 299
+R P ++ +V H +R+ A +LR + + D++
Sbjct: 430 YRGPKQNKPKVLHAIRRGASILRVSMPKIKDVN 462
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 36 LCPPTTTYTP 7
LC P TTYTP
Sbjct: 148 LCVPFTTYTP 157
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/19 (47%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = +2
Query: 272 IVGYLIYTLVQI-VTFLFG 325
+VGYL+Y+L Q+ + +FG
Sbjct: 159 VVGYLLYSLGQVFMLCIFG 177
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,940
Number of Sequences: 438
Number of extensions: 5023
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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