Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1e11
(770 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 380 e-105
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 380 e-105
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 380 e-105
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 380 e-105
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 379 e-105
AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p pro... 36 0.046
AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-P... 36 0.046
AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-P... 36 0.046
AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-P... 36 0.046
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 30 3.1
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 30 3.1
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 30 3.1
AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA... 30 4.0
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 380 bits (935), Expect = e-105
Identities = 180/193 (93%), Positives = 186/193 (96%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 531
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 712 GNFAKATYAAIAQ 750
GNFAKATYAAIA+
Sbjct: 217 GNFAKATYAAIAK 229
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 380 bits (935), Expect = e-105
Identities = 180/193 (93%), Positives = 186/193 (96%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 531
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 712 GNFAKATYAAIAQ 750
GNFAKATYAAIA+
Sbjct: 217 GNFAKATYAAIAK 229
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 380 bits (935), Expect = e-105
Identities = 180/193 (93%), Positives = 186/193 (96%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 531
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 712 GNFAKATYAAIAQ 750
GNFAKATYAAIA+
Sbjct: 217 GNFAKATYAAIAK 229
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 380 bits (935), Expect = e-105
Identities = 180/193 (93%), Positives = 186/193 (96%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 531
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 712 GNFAKATYAAIAQ 750
GNFAKATYAAIA+
Sbjct: 217 GNFAKATYAAIAK 229
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 379 bits (932), Expect = e-105
Identities = 179/193 (92%), Positives = 186/193 (96%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 531
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTL 216
Query: 712 GNFAKATYAAIAQ 750
GNFAKATYAAIA+
Sbjct: 217 GNFAKATYAAIAK 229
>AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p
protein.
Length = 407
Score = 36.3 bits (80), Expect = 0.046
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
T+ G + P G G+V + + ++ G++D Y GST + N AK
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAK 300
Query: 727 ATYAAI 744
A + +
Sbjct: 301 AFFIGL 306
>AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-PC,
isoform C protein.
Length = 407
Score = 36.3 bits (80), Expect = 0.046
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
T+ G + P G G+V + + ++ G++D Y GST + N AK
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAK 300
Query: 727 ATYAAI 744
A + +
Sbjct: 301 AFFIGL 306
>AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-PA,
isoform A protein.
Length = 407
Score = 36.3 bits (80), Expect = 0.046
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
T+ G + P G G+V + + ++ G++D Y GST + N AK
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAK 300
Query: 727 ATYAAI 744
A + +
Sbjct: 301 AFFIGL 306
>AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-PB,
isoform B protein.
Length = 916
Score = 36.3 bits (80), Expect = 0.046
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
T+ G + P G G+V + + ++ G++D Y GST + N AK
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAK 300
Query: 727 ATYAAI 744
A + +
Sbjct: 301 AFFIGL 306
Score = 36.3 bits (80), Expect = 0.046
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 466 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 518
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
T+ G + P G G+V + + ++ G++D Y GST + N AK
Sbjct: 519 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAK 577
Query: 727 ATYAAI 744
A + +
Sbjct: 578 AFFIGL 583
Score = 36.3 bits (80), Expect = 0.046
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 743 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 795
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
T+ G + P G G+V + + ++ G++D Y GST + N AK
Sbjct: 796 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAK 854
Query: 727 ATYAAI 744
A + +
Sbjct: 855 AFFIGL 860
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 178 LPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRREN-RHVHRLEQRPPLLN 35
L C H D R+H + GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 178 LPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRREN-RHVHRLEQRPPLLN 35
L C H D R+H + GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 541 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 663
PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 907 PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
>AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA
protein.
Length = 579
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 163 HDHGRDHDRVHEDRHGLY 110
HDH DHD VH+ H Y
Sbjct: 413 HDHAPDHDHVHDHHHDHY 430
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,971,061
Number of Sequences: 53049
Number of extensions: 830401
Number of successful extensions: 4467
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3413
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -