Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1d17
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 51 2e-07
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 44 3e-05
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 40 3e-04
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 38 0.002
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 35 0.009
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 32 0.088
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 32 0.088
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 31 0.20
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 29 0.62
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 27 1.9
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 1.9
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 27 3.3
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 26 4.4
SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase |Schi... 26 4.4
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 25 7.7
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 50.8 bits (116), Expect = 2e-07
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Frame = +2
Query: 347 TGMAFGF-SAVALPQLQNPNSTL--FISEDQASWIASLSSAGTPIGCILSGYLMDLIGRR 517
+G+ FG+ + V L S L +S Q I S +S I SG+L D +GR+
Sbjct: 91 SGLLFGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRK 150
Query: 518 XXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGFGSGMVGAPARVYTCEVS 673
G ++++ S N+ MM +GR +VG+G G+ +Y E++
Sbjct: 151 RLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITELA 202
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 43.6 bits (98), Expect = 3e-05
Identities = 29/119 (24%), Positives = 54/119 (45%)
Frame = +2
Query: 317 SFLANLGTINTGMAFGFSAVALPQLQNPNSTLFISEDQASWIASLSSAGTPIGCILSGYL 496
+F A +G + G G + AL + ++ +I S +S G +G I++G L
Sbjct: 91 AFAAGIGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGAL 150
Query: 497 MDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGFGSGMVGAPARVYTCEVS 673
D GR+ G I+ T+ ++ M +GR ++G+G G+ +Y E++
Sbjct: 151 ADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIA 209
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 39.9 bits (89), Expect = 3e-04
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +2
Query: 407 TLFISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWIL-ISTSVN 583
T S + + + + GT +GC+LS L D G+R G I+ ++T +
Sbjct: 50 TYSYSSARQGLLVGMVNTGTTVGCLLSSPLGDRFGKRKCIMGWTLVYITGVIVQLTTIPS 109
Query: 584 IPMMYIGRLLVGFGSGMVGAPARVYTCEVSQPH 682
M + ++ G G G + A Y E S PH
Sbjct: 110 WVQMMVAKIWTGLGIGALSVIAPGYQSESSPPH 142
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 37.5 bits (83), Expect = 0.002
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = +2
Query: 395 NP-NSTLFISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILIS 571
NP T S + I + + G+ GC++S D IG+R G I+
Sbjct: 45 NPVTDTYSYSSARQGLITGMVNVGSFFGCLISSPTTDRIGKRNSIIGFCVIYLIGVIIQV 104
Query: 572 TSV-NIPMMYIGRLLVGFGSGMVGAPARVYTCEVSQPH 682
T+V + + + ++ G G G + A Y EV+ PH
Sbjct: 105 TAVPSWVQIMVAKIWTGLGIGALSVLAPGYQSEVAPPH 142
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 35.1 bits (77), Expect = 0.009
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +2
Query: 395 NP-NSTLFISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILIS 571
NP T S + I + + G+ GCILS LMD IG+R G IL
Sbjct: 45 NPVTDTYSYSSARQGLITGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGIILQV 104
Query: 572 TSV-NIPMMYIGRLLVGFGSGMVGAPARVYTCEVS 673
T+V + + + ++ G G + A + EV+
Sbjct: 105 TAVPSWVQIMVAKIWTGLAIGALSVLAPGFQSEVA 139
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 31.9 bits (69), Expect = 0.088
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 416 ISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSV-NIPM 592
+S + + + + G+ GCI+S + D G+R G I+ T+V +
Sbjct: 57 LSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSWVQ 116
Query: 593 MYIGRLLVGFGSGMVGAPARVYTCEVSQP 679
+ + ++ G G G + A Y E + P
Sbjct: 117 IMVAKIWTGIGIGALSVLAPGYQSETAPP 145
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 31.9 bits (69), Expect = 0.088
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 440 IASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSV-NIPMMYIGRLLV 616
I + + G+ GC LS LMD IG+R G IL T+V + + + ++
Sbjct: 61 ITGMVNVGSFFGCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWT 120
Query: 617 GFGSGMVGAPARVYTCEVS 673
G G + A + EV+
Sbjct: 121 GLSIGALSVLAPGFQSEVA 139
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 30.7 bits (66), Expect = 0.20
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +2
Query: 482 LSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGFGSGMVGAPARVYT 661
L G L D+ GRR G S ++P + + R L G G G +G + + +
Sbjct: 85 LYGRLSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSIIS 144
Query: 662 CEV 670
++
Sbjct: 145 SDI 147
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 29.1 bits (62), Expect = 0.62
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +2
Query: 419 SEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWIL-ISTSVNIPMM 595
S + I + + G+ GC+LS + D IG+R G I+ ++T + +
Sbjct: 22 SSSRQGLITGMVNVGSFFGCLLSSPVADKIGKRLSIIVWTTVYLIGIIIQVTTVPSWVQI 81
Query: 596 YIGRLLVGFGSGMVGAPARVYTCEVS 673
+ ++ G G + Y EV+
Sbjct: 82 LVAKIWTGLSIGALSVITPGYQSEVA 107
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 635 PYPNRSQPAAYLYTSWEYLQRSKSESIRE 549
P+P++ PAAY+ + S+ +S+RE
Sbjct: 41 PHPHKEHPAAYVAAKTGFNATSRRQSVRE 69
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/81 (20%), Positives = 29/81 (35%)
Frame = +2
Query: 428 QASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGR 607
Q SW A+ L G D+ GR+ G L TS ++ + R
Sbjct: 125 QVSWTATAYMISCTAFQPLFGKFCDIYGRKKTLLAAYCVFGIGCFLCGTSRSLWQLVAAR 184
Query: 608 LLVGFGSGMVGAPARVYTCEV 670
+ G G G + + + ++
Sbjct: 185 AIAGIGGGGMNSTVSILMSDI 205
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 255 STFLVIVAGTPFLMNGADSFFSSVIVITVCPFS 157
ST+ ++GTP + NG + F+S + + + P+S
Sbjct: 560 STYRWCLSGTP-MQNGVEEFYSLIKFLRIKPYS 591
>SPAC26H5.04 |||vacuolar import and degradation protein
Vid28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 729
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 167 QTVITMTEEKNESAPFIKNGVPATITKKVLIEK 265
Q + T +K ES F+ VP + K+L+EK
Sbjct: 533 QVLRNFTCQKEESVDFLLKMVPMELLAKILLEK 565
>SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/31 (32%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = -2
Query: 609 SLPIYIMGI---FTEVEIRIHPRMRGISVSI 526
S+P+Y +G + E +HPR++G+S+++
Sbjct: 194 SIPLYHIGFNFAYAERHFVMHPRVKGVSMAV 224
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 600 IYIMGIFTEVEIRIHPRMRGISVSIK 523
I + GIF V +R++PRMR + K
Sbjct: 410 IEVTGIFRCVPVRLNPRMRTVKSLFK 435
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,961,123
Number of Sequences: 5004
Number of extensions: 61818
Number of successful extensions: 194
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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