Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1d17
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 38 0.009
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 38 0.009
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 36 0.027
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 36 0.035
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 35 0.047
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 35 0.062
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 35 0.062
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 32 0.44
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 31 1.0
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 31 1.0
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 31 1.0
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 31 1.0
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 31 1.0
U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to i... 30 1.8
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 29 3.1
U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified vi... 29 3.1
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 29 3.1
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 28 7.1
Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical p... 27 9.4
Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B regula... 27 9.4
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 5/130 (3%)
Frame = +2
Query: 308 VFASFLANLGTINTGMAFGF--SAVALPQLQNPNSTLFISEDQASW---IASLSSAGTPI 472
+F LA I G FG+ S V+ L P++ D W + S+S +
Sbjct: 23 LFVYILAAASVIG-GFLFGYDTSVVSAAMLYMPDAPGLKPMDTV-WQEVLVSISPGMAAV 80
Query: 473 GCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGFGSGMVGAPAR 652
G ++SG D IGRR G ++ + SVN M+ +GR+L+G G
Sbjct: 81 GSLMSGTSSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVP 140
Query: 653 VYTCEVSQPH 682
VY E + H
Sbjct: 141 VYLGETAPTH 150
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/122 (22%), Positives = 48/122 (39%)
Frame = +2
Query: 317 SFLANLGTINTGMAFGFSAVALPQLQNPNSTLFISEDQASWIASLSSAGTPIGCILSGYL 496
+F A +G G G + A+ + N + + I S++ IG + SG
Sbjct: 32 AFSAVIGGFLFGYDTGIVSAAMLYVPNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPG 91
Query: 497 MDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGFGSGMVGAPARVYTCEVSQ 676
D +GR+ G I+ + + ++ IGR+L+G G +Y E S
Sbjct: 92 SDFLGRKKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASP 151
Query: 677 PH 682
H
Sbjct: 152 SH 153
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 446 SLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNI---PMMYIGRLLV 616
S+ + G IG + SG+L D +GRR L+ + ++ PM+ +GRL++
Sbjct: 104 SVFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLII 163
Query: 617 GFGSGMVGAPARVYTCEVS 673
G G A ++ E+S
Sbjct: 164 GLNCGFSSALVPMFLTEIS 182
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 446 SLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNI---PMMYIGRLLV 616
S+ + G IG + SG+L D +GRR L+ + ++ PM+ +GRL++
Sbjct: 86 SVFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLII 145
Query: 617 GFGSGMVGAPARVYTCEVS 673
G G A ++ E+S
Sbjct: 146 GLNCGFSSALVPMFLTEIS 164
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 35.9 bits (79), Expect = 0.027
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = +2
Query: 416 ISEDQASWI----ASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTS-- 577
+S+ QA +I S+ S G G SG+L D GR+ + +STS
Sbjct: 91 LSQYQADFIWSVAVSMFSVGGMFGSFCSGFLADKFGRKSTLLYNNILALLAAVCLSTSKL 150
Query: 578 VNI-PMMYIGRLLVGFGSGMVGAPARVYTCEVS 673
N PM+ GR LVG G+ ++ E++
Sbjct: 151 FNFYPMIVFGRFLVGLNCGITSGLVPMFLTELA 183
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 461 GTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGF 622
GT +G ++ GYL D IGRR IL + ++ YI R LVGF
Sbjct: 116 GTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIFRFLVGF 169
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 35.1 bits (77), Expect = 0.047
Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 5/141 (3%)
Frame = +2
Query: 275 GKEGRGKALKQVFASFLANLGTINTGMAFGF--SAVALPQLQNPNSTLFISEDQASW--- 439
G+ K K F +L I G FG+ S V+ L P + + W
Sbjct: 12 GRPRPEKNPKLGFFVYLLGSAAIIGGFLFGYDTSVVSAAMLYVPEAP-GLKPMGTVWKEV 70
Query: 440 IASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVG 619
I S++ +G SG D GR+ G ++ + + +M IGR+ +G
Sbjct: 71 IVSITPGMAAVGAWFSGAGSDRYGRKPIIIGSTLIFVCGAVICAVAWTKIVMLIGRIFLG 130
Query: 620 FGSGMVGAPARVYTCEVSQPH 682
G G VY E S H
Sbjct: 131 VGIGFASMVVPVYLGEASPTH 151
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 34.7 bits (76), Expect = 0.062
Identities = 24/80 (30%), Positives = 31/80 (38%)
Frame = +2
Query: 443 ASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGF 622
A + G IG I+ GY+ D IGR+ L +T +I YI R L G
Sbjct: 112 AFVQYVGVLIGNIILGYVADQIGRKKTFILSMLIGIPSLSLSATFNSIAAFYIFRALTGI 171
Query: 623 GSGMVGAPARVYTCEVSQPH 682
G Y E+ PH
Sbjct: 172 GIAGTMIVGWAYFSELVSPH 191
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 446 SLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLVGFG 625
S+ G G I+ G + D GR+ GW+++ S N+ I R +VGF
Sbjct: 133 SVQMFGVLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLIVVQSRNLLHFTISRTIVGFF 192
Query: 626 SG 631
+G
Sbjct: 193 TG 194
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +2
Query: 446 SLSSA---GTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGRLLV 616
SLS+A GT +G I G+L D GRR +L + NI YI R+L+
Sbjct: 117 SLSTATFIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILI 176
Query: 617 GFGSGMVGAPARVYTCEVSQPH 682
G Y E+ P+
Sbjct: 177 GISVSGTLTVGWTYATEMISPN 198
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 31.9 bits (69), Expect = 0.44
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +2
Query: 419 SEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMY 598
S + ++SL G IG + G+L D +GR+ G IL++ S+ + M
Sbjct: 111 SNQTTAMMSSLLMWGALIGSFVCGFLSDRLGRKPVYLGCLLMITIGHILLTFSMYLSWMT 170
Query: 599 IGRLLVGFG 625
I L G
Sbjct: 171 INATLAAMG 179
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 669 TSHVYTLAGAPTIPEPKPTSSLP 601
TS T+ APT+P P P +SLP
Sbjct: 15 TSQASTVVSAPTLPPPSPLTSLP 37
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 669 TSHVYTLAGAPTIPEPKPTSSLP 601
TS T+ APT+P P P +SLP
Sbjct: 17 TSQASTVVSAPTLPPPSPLTSLP 39
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 669 TSHVYTLAGAPTIPEPKPTSSLP 601
TS T+ APT+P P P +SLP
Sbjct: 14 TSQASTVVSAPTLPPPSPLTSLP 36
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 669 TSHVYTLAGAPTIPEPKPTSSLP 601
TS T+ APT+P P P +SLP
Sbjct: 52 TSQASTVVSAPTLPPPSPLTSLP 74
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 669 TSHVYTLAGAPTIPEPKPTSSLP 601
TS T+ APT+P P P +SLP
Sbjct: 126 TSQASTVVSAPTLPPPSPLTSLP 148
>U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 19 protein.
Length = 430
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 109 QVHHHFSDNLHTFDTITERTNCDNNDGREERISAVHQEWSTGHDHQEGAN*EMQAWERRP 288
+++ ++S F+T+ E NC NN E H T + + + E A +P
Sbjct: 243 ELYEYYSKTSRAFETLAENINCYNNYDFE---ILSHLATGTKPERERKSEKEESAKTSQP 299
Query: 289 RESSETGLRLVFG 327
R + E L+FG
Sbjct: 300 RGNEEELKNLLFG 312
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 178 YHSLSVQ-LLYQTYVNYH*NGDALDKYHCMMTDLLATNI 65
YH L V L + ++ N+H A + +HC++ DLL +I
Sbjct: 402 YHKLIVPGLSHSSHPNFHSFYPAGNSFHCLLADLLGGHI 440
>U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 7 protein.
Length = 357
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = +2
Query: 434 SWIASLSSA--GTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWIL--ISTSV--NIPMM 595
+W +SS G IGC ++ + GR+ G +L + TSV + +
Sbjct: 101 AWEMLVSSRIYGLAIGCFVAVLMSHRHGRKLPVVVGTILDVIGVVLTLLITSVPHGVTVA 160
Query: 596 YIGRLLVGFGSGMVGAPARVYTCEV 670
+GRL+ G G GMV V E+
Sbjct: 161 TVGRLINGIGQGMVQTAGSVMLSEL 185
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 431 ASWIASLSSAGTPIGCILSGYLMDLIGRR 517
A+W+A++ G IG I G+L D GR+
Sbjct: 96 AAWVATIQFIGVLIGAITYGHLGDHFGRK 124
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 431 ASWIASLSSAGTPIGCILSGYLMDLIGRR 517
++WIA++ G +G ++ G+L D GR+
Sbjct: 96 SAWIATIQFIGALVGALVYGHLGDHFGRK 124
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 109 QVHHHFSDNLHTFDTITERTNCDNNDGREERISAVHQEWSTGHDHQEGAN*EM-QAWERR 285
+ F + FD + ++ + D REERI + S +G ++ + E+R
Sbjct: 46 EAERRFIEAKEAFDFLYDKEKREEYDNREERIRMAQEHHSKRMAEADGKRKKLIEDLEKR 105
Query: 286 PRESSETGLRLVFG 327
+E S G R G
Sbjct: 106 EKEFSNGGKRSADG 119
>Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 85 QSSCSDIYQVHHHFSDNL---HTFDTITERTNCD-NNDGREERISAVHQEWSTGHDHQEG 252
+S + Y VH++ L + D+I ++ CD + D + + H + + + G
Sbjct: 356 ESQPVETYPVHNYLRTKLCALYENDSIFDKFECDWSGDDKHILTGSYHNLFRS---YARG 412
Query: 253 AN*EMQAWERRPRE 294
N + + WE RP+E
Sbjct: 413 NNQDAKTWEARPQE 426
>Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 85 QSSCSDIYQVHHHFSDNL---HTFDTITERTNCD-NNDGREERISAVHQEWSTGHDHQEG 252
+S + Y VH++ L + D+I ++ CD + D + + H + + + G
Sbjct: 356 ESQPVETYPVHNYLRTKLCALYENDSIFDKFECDWSGDDKHILTGSYHNLFRS---YARG 412
Query: 253 AN*EMQAWERRPRE 294
N + + WE RP+E
Sbjct: 413 NNQDAKTWEARPQE 426
>AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B
regulatory subunit PR55/B protein.
Length = 495
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 85 QSSCSDIYQVHHHFSDNL---HTFDTITERTNCD-NNDGREERISAVHQEWSTGHDHQEG 252
+S + Y VH++ L + D+I ++ CD + D + + H + + + G
Sbjct: 356 ESQPVETYPVHNYLRTKLCALYENDSIFDKFECDWSGDDKHILTGSYHNLFRS---YARG 412
Query: 253 AN*EMQAWERRPRE 294
N + + WE RP+E
Sbjct: 413 NNQDAKTWEARPQE 426
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,566,451
Number of Sequences: 27780
Number of extensions: 352672
Number of successful extensions: 961
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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