Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1d06
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 42 8e-05
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 42 8e-05
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 42 1e-04
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 40 4e-04
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 39 8e-04
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 38 0.001
SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 34 0.022
SPBPB2B2.16c |||MFS family membrane transporter |Schizosaccharom... 34 0.022
SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|ch... 34 0.022
SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr ... 33 0.050
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 31 0.12
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 2.5
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 27 2.5
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 27 2.5
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 26 4.3
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 4.3
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 5.7
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 26 5.7
SPAC24B11.13 |hem3|SPAC806.01|hydroxymethylbilane synthase|Schiz... 25 7.6
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 25 7.6
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha... 25 7.6
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 25 10.0
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 25 10.0
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 25 10.0
SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 10.0
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 10.0
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 41.9 bits (94), Expect = 8e-05
Identities = 27/135 (20%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Frame = +3
Query: 285 ESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARF 464
+ +I + L G + +GRK I+ + +IVG ++ +A + + ++ RF
Sbjct: 129 KEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRF 188
Query: 465 LQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGS-----YVTWQW 629
+ G +G+++ + P+ + E K RG + L++ + + + + + W+W
Sbjct: 189 VIGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIAYGIDTAFEHVHNGWRW 248
Query: 630 -TALRVFSNNFHRFI 671
L + F FI
Sbjct: 249 MVGLAMVPAAFQLFI 263
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 41.9 bits (94), Expect = 8e-05
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Frame = +3
Query: 273 DESTESWIAAIPGFALLFGNFTIPTI---MGKYGRKVANIISVLPVIVGWLLITSASNTY 443
D S+ SWI + +L N +P + GRK+ I + ++G L ++ N
Sbjct: 129 DTSSSSWIGSA---YVLASNAVLPAVGVFCNILGRKIVLYICIFFFMLGSALCGASQNMI 185
Query: 444 FILAARFLQGISMGMSTSLGPILIGEY----TSPKYRGAFLSSLCLVMAMATLTVHSVGS 611
+++ R +QG+ G SL I+I + T P Y G ++ + + ++
Sbjct: 186 WLIVCRAIQGLGGGGIISLVNIIISDITPLRTRPMYSGILATAWGAALVAGPIIGGAICQ 245
Query: 612 YVTWQW 629
TW+W
Sbjct: 246 RTTWRW 251
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 41.5 bits (93), Expect = 1e-04
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +3
Query: 363 GRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGE----YTS 530
GRK+ S++ + G + +A N +++ R +QGI G TSL I+I + T
Sbjct: 153 GRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGITSLVTIVIADITPLQTR 212
Query: 531 PKYRGAFLSSLCLVMAMATLTVHSVGSYVTWQW 629
P Y G + L M L ++ +W+W
Sbjct: 213 PYYTGCMGVTWGLASVMGPLIGGAISQKASWRW 245
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 39.5 bits (88), Expect = 4e-04
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +3
Query: 363 GRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGE----YTS 530
GRK+ S++ + G + +A N +++ R +QGI G SL I+I + T
Sbjct: 153 GRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGIMSLVTIVIADITPLQTR 212
Query: 531 PKYRGAFLSSLCLVMAMATLTVHSVGSYVTWQW 629
P Y G + + M L ++ TW+W
Sbjct: 213 PYYTGCMGVTWGVASVMGPLIGGAISQNTTWRW 245
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 38.7 bits (86), Expect = 8e-04
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Frame = +3
Query: 165 FVTSGVA-ISMAQFGLVFGITAILIPQLQSQKPVMLIDESTESWIAAIPGFALLFGNFTI 341
+V S VA IS FG G+ + + L S +L E I + FA L T
Sbjct: 82 WVLSAVAGISGLLFGYDTGVISGALAVLGSDLGHVLSSGQKEL-ITSATSFAALISATTS 140
Query: 342 PTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGE 521
+ GRK + + ++G +++ ++ N ++ RF+ G +G+++ + P+ I E
Sbjct: 141 GWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITE 200
Query: 522 YTSPKYRGAFLSSLCLVMAMATLTVHSVGS 611
+ RG + + + L +S+ +
Sbjct: 201 LAPARLRGRLVIIYVVFITGGQLIAYSLNA 230
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 37.9 bits (84), Expect = 0.001
Identities = 29/115 (25%), Positives = 51/115 (44%)
Frame = +3
Query: 288 SWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFL 467
+++ + F LFG F YGRK + + +G L ++ + + ++AAR +
Sbjct: 132 AYMISCTAFQPLFGKFC-----DIYGRKKTLLAAYCVFGIGCFLCGTSRSLWQLVAARAI 186
Query: 468 QGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYVTWQWT 632
GI G S IL+ + K RG + + + A+ + VG Y Q+T
Sbjct: 187 AGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFFAIGSSLGGPVGGYFADQYT 241
>SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 33.9 bits (74), Expect = 0.022
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +3
Query: 297 AAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGI 476
A + +LFGN + ++GR+ +I + + I + N L RF G+
Sbjct: 84 ATLYTLGILFGNLIFAPLSEQFGRRPIYLIGYSVFALLQIPIALSVNLAMFLVFRFFSGL 143
Query: 477 --SMGMSTSLGPI--LIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVG-SYVTWQW 629
S+G+S G + L + KY + + L + +A + + S + WQW
Sbjct: 144 FGSVGLSNGSGSLADLFEKKDRGKYMVIYFTVLSIGPGIAPIISGFISQSSIGWQW 199
>SPBPB2B2.16c |||MFS family membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 33.9 bits (74), Expect = 0.022
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +3
Query: 297 AAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGI 476
A + +LFGN + ++GR+ +I + + I + N L RF G+
Sbjct: 84 ATLYTLGILFGNLIFAPLSEQFGRRPIYLIGYSVFALLQIPIALSVNLAMFLVFRFFSGL 143
Query: 477 --SMGMSTSLGPI--LIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVG-SYVTWQW 629
S+G+S G + L + KY + + L + +A + + S + WQW
Sbjct: 144 FGSVGLSNGSGSLADLFEKKDRGKYMVIYFTVLSIGPGIAPIISGFISQSSIGWQW 199
>SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 33.9 bits (74), Expect = 0.022
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +3
Query: 297 AAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGI 476
A + +LFGN + ++GR+ +I + + I + N L RF G+
Sbjct: 84 ATLYTLGILFGNLIFAPLSEQFGRRPIYLIGYSVFALLQIPIALSVNLAMFLVFRFFSGL 143
Query: 477 --SMGMSTSLGPI--LIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVG-SYVTWQW 629
S+G+S G + L + KY + + L + +A + + S + WQW
Sbjct: 144 FGSVGLSNGSGSLADLFEKKDRGKYMVIYFTVLSIGPGIAPIISGFISQSSIGWQW 199
>SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 448
Score = 32.7 bits (71), Expect = 0.050
Identities = 31/163 (19%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Frame = +3
Query: 138 WITPFVKQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKPVMLID--ESTESWIAAIPG 311
W+ F+ +AI++ ++GI ++P + + D +S S + A+
Sbjct: 6 WVKQRRSLPFIIGTIAIALFTDLFLYGIITPILPFSLVDRVGISPDRVQSVISTLLAVYA 65
Query: 312 FALLFGNFTIPTIMGKY-GRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGM 488
A + + I + K+ RKV +I ++ + L+T ++ ++ AR LQG+S +
Sbjct: 66 VANIAASSPIGFLADKFLTRKVPMLIGLIFLTSATALLTFGNSVPMLIVARVLQGLSAAV 125
Query: 489 STSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYV 617
++G L+ + G+ + + +++ + G V
Sbjct: 126 VWTVGLALLVDVVGADNVGSTMGGIFGFISLGEIIAPVFGGIV 168
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 31.5 bits (68), Expect = 0.12
Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +3
Query: 279 STESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLL-ITSASNTYFILA 455
S + I + FG + K G++++ I+ ++G ++ +T+ + IL
Sbjct: 24 SRQGLITGMVNVGSFFGCLLSSPVADKIGKRLSIIVWTTVYLIGIIIQVTTVPSWVQILV 83
Query: 456 ARFLQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAM 581
A+ G+S+G + + P E RGA +++ L + +
Sbjct: 84 AKIWTGLSIGALSVITPGYQSEVAPAIMRGAIVTTYQLFITL 125
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 488 EHIIGTDLDWRIHQPKV---PWSVFIESLLSYGDGYFDGAFCRLICDMAMDCPS 640
E +G D+++ + PW +++ +L+ + GY C ++ DC S
Sbjct: 669 EAFLGGDMEYDVQNETGLHRPWCLYVSTLILWAYGYVSDGRCEMLEPGNNDCKS 722
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 27.1 bits (57), Expect = 2.5
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 11/212 (5%)
Frame = +3
Query: 39 MVKANLIQIHDVIRLNYY------FLLFFVFSFHNKMVRWITPFVKQCFVTSGVAISMAQ 200
+VKA + H R+++Y FLLFF SF + +T + F + ++A
Sbjct: 78 IVKARYLTEHSS-RISFYICYFSIFLLFFAISFQAECYYSLTAYATSAFAGHSLLSTIAV 136
Query: 201 FGLVFGITAILIPQLQSQKPVM-LIDESTESWIAAIPGFALLFGNFTIPTIMGKYGRKVA 377
+ I+A + P L V ++ S + + G L+ + + T G A
Sbjct: 137 ANNI--ISAAIKPPLARLSDVFGRLEAFLFSLLLYLVGLILMAASTNVQTYAGGSVLYNA 194
Query: 378 NIISVLPVIVGWLLITSA-SNTYFILAARFLQGISMGMSTSLGPILIGE-YTSPKYRGAF 551
V ++ ++ TS+ +N +L +L + ++ +GP + E Y +R
Sbjct: 195 GYTGVELIMTIFMADTSSMANRSLVLGISYLPFV---VTIWIGPRVAQEFYMHSTWRWGI 251
Query: 552 LSSLCLVMAMAT--LTVHSVGSYVTWQWTALR 641
L+ A + L V+S + W+ AL+
Sbjct: 252 AVWTILIPACSIPFLAVYSYYQFRAWREGALK 283
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 386 QCSARNRRLAVNHKRLQHIL--HLGCKISSRDLYGNE 490
+CS+ + R+ + + ++HIL HLG + R + NE
Sbjct: 583 ECSSPDERIRIPQRIIRHILNRHLGNNVGDRVSFRNE 619
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 640 RRAVHCHVTYEPTECTVKVAIAITKQRLDKNAPR 539
R VH H+TY+ + + + K + KN+PR
Sbjct: 522 RANVHLHMTYDQAIIIMSRPVLLHKMKNAKNSPR 555
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 26.2 bits (55), Expect = 4.3
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 93 FLLFFVFSFHNKMVRWITPFVKQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKPVMLI 272
+LLFF + H ++ W+ F K+ + + IS A VF T + Q S +
Sbjct: 164 YLLFFYEASHPDVLEWVHSFFKE---NTEIRISSATVDAVFN-TVVFESQNSSDSDCNFV 219
Query: 273 D-ESTESW 293
S E W
Sbjct: 220 SISSPEFW 227
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 446 HLGCKISSRDLYGNEHIIGTDLDW 517
++GC S D YG+ GT DW
Sbjct: 240 YVGCYDSDFDQYGDTEAFGTHPDW 263
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.8 bits (54), Expect = 5.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 452 GCKISSRDLYGNEHIIGTDLDWR 520
GC +S D YG+ G+ DW+
Sbjct: 250 GCYVSDYDHYGDTEAFGSHPDWQ 272
>SPAC24B11.13 |hem3|SPAC806.01|hydroxymethylbilane
synthase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 25.4 bits (53), Expect = 7.6
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +2
Query: 434 QHILHLGCKISSRDLYGNEHIIGTDLDWRIHQPKVPWSVFIESLLSYGDGYFDGAFCRLI 613
+H HL I SRD G+E + +++ K W+ +E+LL CR++
Sbjct: 30 KHYPHLEFPIISRDTIGDEILSKALFEFKRQLAKSLWTRELEALLVTNQ-------CRIL 82
Query: 614 CDMAMDCPS 640
D PS
Sbjct: 83 VHSLKDLPS 91
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1647
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 561 LCLVMAMATLTVHSVGSYVTWQWTAL 638
+C+V A+ +L S GS+ WTAL
Sbjct: 634 ICIVRALESLAHLSTGSFNNALWTAL 659
>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
alpha-glucosyltransferase Alg10|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 445
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +3
Query: 78 RLNYYFLLFFVFSFHNKMVRWITPFVKQCFVTSGV 182
++NY+ FF FSF + +++++ ++ + S V
Sbjct: 258 QINYFLWFFFFFSFPSYIIKYLMSHSRRSKLLSAV 292
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 405 VGWLLITSASNTYFILAARFLQGISMGM--STSLGPILIGEYTSPKYR 542
VGW ++ YF+L R L+ ++ + + S+ PI+ G T Y+
Sbjct: 153 VGWSIMFDNLGRYFLLELRGLREVTFALFITFSIVPIITGILTVYIYK 200
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 25.0 bits (52), Expect = 10.0
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +2
Query: 542 WSVFIESLLSYGDGYFDG 595
W++++E L ++GD F+G
Sbjct: 171 WTLYLEFLQTFGDALFEG 188
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 549 FLSSLCLVMAMATLTVHSVGSYVTWQWTALRVFSNNFHRFI 671
F++S V A +L+ S+ VTW ++ + S N +RF+
Sbjct: 441 FITSFSAV-AEVSLSQISIKKLVTWLMSSESIMSENSNRFV 480
>SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 215
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = +3
Query: 534 KYRGAFLS-----SLCLVMAMATLTVHSVGSYVTWQWTALRVF 647
KYRG S + CL+M M V + SY QW+ F
Sbjct: 23 KYRGTLNSKGKNDNDCLIMCMRCRKVKGIDSYSKTQWSKTFTF 65
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.0 bits (52), Expect = 10.0
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 456 ARFLQGISMGMSTSLGP--ILIGEYT-SPKYRGAFLSSLCLVMAMATLTVHSVGSYVTWQ 626
AR++ G++T+ P +L YT S Y G+ L + L M T H V +VT
Sbjct: 1392 ARYI-ATGRGLATTRVPFSVLYSLYTGSSIYLGSRLIMMLLFGTMTVWTTHYVYFWVTMF 1450
Query: 627 WTALRVFSNNFHRF 668
+ F N H+F
Sbjct: 1451 ALVICPFIYNPHQF 1464
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,856,321
Number of Sequences: 5004
Number of extensions: 61153
Number of successful extensions: 182
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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