Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1c16
         (444 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF285118-1|AAG01155.1|   91|Homo sapiens CGI-203 protein.              96   6e-20
AF170070-1|AAF25797.1|   91|Homo sapiens unknown protein.              96   6e-20
BC009552-1|AAH09552.1|   91|Homo sapiens LYR motif containing 4 ...    95   1e-19
BC104668-1|AAI04669.1|   88|Homo sapiens LYR motif containing 2 ...    33   0.59 
BC009782-1|AAH09782.1|   88|Homo sapiens LYR motif containing 2 ...    33   0.59 
BC047079-1|AAH47079.1|  104|Homo sapiens Lyrm7 homolog (mouse) p...    30   4.1  
BC037930-1|AAH37930.1|  104|Homo sapiens Lyrm7 homolog (mouse) p...    29   5.5  

>AF285118-1|AAG01155.1|   91|Homo sapiens CGI-203 protein.
          Length = 91

 Score = 95.9 bits (228), Expect = 6e-20
 Identities = 44/83 (53%), Positives = 60/83 (72%)
 Frame = +3

Query: 99  AIPKIQILSLYKLLLRESQKFPNYNFRAYALRRIRDAFKDNKNVSDVKIVKKEFEFGKEN 278
           A  + Q+LSLY+ +LRES++F  YN+R YA+RRIRDAF++NKNV D   ++      K +
Sbjct: 3   ASSRAQVLSLYRAMLRESKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNKAKRD 62

Query: 279 LNVIRRQAAIGNMYKTEKLVIEN 347
           L VIRRQ  IG +Y T+KL+IEN
Sbjct: 63  LGVIRRQVHIGQLYSTDKLIIEN 85


>AF170070-1|AAF25797.1|   91|Homo sapiens unknown protein.
          Length = 91

 Score = 95.9 bits (228), Expect = 6e-20
 Identities = 44/83 (53%), Positives = 60/83 (72%)
 Frame = +3

Query: 99  AIPKIQILSLYKLLLRESQKFPNYNFRAYALRRIRDAFKDNKNVSDVKIVKKEFEFGKEN 278
           A  + Q+LSLY+ +LRES++F  YN+R YA+RRIRDAF++NKNV D   ++      K +
Sbjct: 3   ASSRAQVLSLYRAMLRESKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNKAKRD 62

Query: 279 LNVIRRQAAIGNMYKTEKLVIEN 347
           L VIRRQ  IG +Y T+KL+IEN
Sbjct: 63  LGVIRRQVHIGQLYSTDKLIIEN 85


>BC009552-1|AAH09552.1|   91|Homo sapiens LYR motif containing 4
           protein.
          Length = 91

 Score = 94.7 bits (225), Expect = 1e-19
 Identities = 43/83 (51%), Positives = 60/83 (72%)
 Frame = +3

Query: 99  AIPKIQILSLYKLLLRESQKFPNYNFRAYALRRIRDAFKDNKNVSDVKIVKKEFEFGKEN 278
           A  + Q+L+LY+ +LRES++F  YN+R YA+RRIRDAF++NKNV D   ++      K +
Sbjct: 3   ASSRAQVLALYRAMLRESKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNKAKRD 62

Query: 279 LNVIRRQAAIGNMYKTEKLVIEN 347
           L VIRRQ  IG +Y T+KL+IEN
Sbjct: 63  LGVIRRQVHIGQLYSTDKLIIEN 85


>BC104668-1|AAI04669.1|   88|Homo sapiens LYR motif containing 2
           protein.
          Length = 88

 Score = 32.7 bits (71), Expect = 0.59
 Identities = 16/65 (24%), Positives = 33/65 (50%)
 Frame = +3

Query: 114 QILSLYKLLLRESQKFPNYNFRAYALRRIRDAFKDNKNVSDVKIVKKEFEFGKENLNVIR 293
           Q+L LY+ +L+  ++ PN + R Y     R+ F+ NK+ ++   ++     G   L  + 
Sbjct: 21  QVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFRRNKSATEEDTIRMMITQGNMQLKELE 80

Query: 294 RQAAI 308
           +  A+
Sbjct: 81  KTLAL 85


>BC009782-1|AAH09782.1|   88|Homo sapiens LYR motif containing 2
           protein.
          Length = 88

 Score = 32.7 bits (71), Expect = 0.59
 Identities = 16/65 (24%), Positives = 33/65 (50%)
 Frame = +3

Query: 114 QILSLYKLLLRESQKFPNYNFRAYALRRIRDAFKDNKNVSDVKIVKKEFEFGKENLNVIR 293
           Q+L LY+ +L+  ++ PN + R Y     R+ F+ NK+ ++   ++     G   L  + 
Sbjct: 21  QVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFRRNKSATEEDTIRMMITQGNMQLKELE 80

Query: 294 RQAAI 308
           +  A+
Sbjct: 81  KTLAL 85


>BC047079-1|AAH47079.1|  104|Homo sapiens Lyrm7 homolog (mouse)
           protein.
          Length = 104

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +3

Query: 111 IQILSLYKLLLRESQKFPNYNFRAYALRRIR--DAFKDNKNVSDVKIVKKEFEFGKENLN 284
           +++L L+K L R  Q+    + RA    RI+  + FK+NK+ +  K +++  + G + + 
Sbjct: 5   VKVLQLFKTLHRTRQQVFKNDARALEAARIKINEEFKNNKSETSSKKIEELMKIGSD-IE 63

Query: 285 VIRRQAAIGNMY 320
           ++ R + I  ++
Sbjct: 64  LLLRTSVIQGIH 75


>BC037930-1|AAH37930.1|  104|Homo sapiens Lyrm7 homolog (mouse)
           protein.
          Length = 104

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +3

Query: 111 IQILSLYKLLLRESQKFPNYNFRAYALRRIR--DAFKDNKNVSDVKIVKKEFEFGKENLN 284
           +++L L+K L R  Q+    + RA    RI+  + FK+NK+ +  K +++  + G + + 
Sbjct: 5   VKVLQLFKTLHRTRQQVFKNDARALEAARIKINEEFKNNKSETSSKKIEELMKIGSD-VE 63

Query: 285 VIRRQAAIGNMY 320
           ++ R + I  ++
Sbjct: 64  LLLRTSVIQGIH 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,153,782
Number of Sequences: 237096
Number of extensions: 919533
Number of successful extensions: 1177
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)