Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1c03
         (796 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130445-1|AAI30446.1|  843|Homo sapiens F-box protein 11 protein.     30   8.4  
BC043258-1|AAH43258.2|  915|Homo sapiens FBXO11 protein protein.       30   8.4  
AY827075-1|AAV87312.1|  927|Homo sapiens F-box protein 11 protein.     30   8.4  
AK223592-1|BAD97312.1|  843|Homo sapiens F-box only protein 11 i...    30   8.4  
AK022735-1|BAB14214.1|  561|Homo sapiens protein ( Homo sapiens ...    30   8.4  
AC079807-1|AAY24083.1|  584|Homo sapiens unknown protein.              30   8.4  

>BC130445-1|AAI30446.1|  843|Homo sapiens F-box protein 11 protein.
          Length = 843

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 300 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 431
           +F+  + D Y   MT   + +D+   H ++HHCL   V    +I
Sbjct: 247 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 290


>BC043258-1|AAH43258.2|  915|Homo sapiens FBXO11 protein protein.
          Length = 915

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 300 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 431
           +F+  + D Y   MT   + +D+   H ++HHCL   V    +I
Sbjct: 319 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 362


>AY827075-1|AAV87312.1|  927|Homo sapiens F-box protein 11 protein.
          Length = 927

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 300 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 431
           +F+  + D Y   MT   + +D+   H ++HHCL   V    +I
Sbjct: 331 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 374


>AK223592-1|BAD97312.1|  843|Homo sapiens F-box only protein 11
           isoform 1 variant protein.
          Length = 843

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 300 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 431
           +F+  + D Y   MT   + +D+   H ++HHCL   V    +I
Sbjct: 247 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 290


>AK022735-1|BAB14214.1|  561|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12673 fis, clone NT2RM4002344. ).
          Length = 561

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 300 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 431
           +F+  + D Y   MT   + +D+   H ++HHCL   V    +I
Sbjct: 122 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 165


>AC079807-1|AAY24083.1|  584|Homo sapiens unknown protein.
          Length = 584

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 300 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 431
           +F+  + D Y   MT   + +D+   H ++HHCL   V    +I
Sbjct: 247 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,165,141
Number of Sequences: 237096
Number of extensions: 1790303
Number of successful extensions: 2329
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2329
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)