Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1c02
         (1003 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69086-1|CAA48829.1| 3433|Homo sapiens utrophin (dystrophin rela...    31   8.7  
AL590704-2|CAI10895.1|   47|Homo sapiens utrophin protein.             31   8.7  
AL590704-1|CAI10894.1| 3433|Homo sapiens utrophin protein.             31   8.7  
AL590488-1|CAI16497.1| 3433|Homo sapiens utrophin protein.             31   8.7  
AL513475-1|CAI13032.1| 3433|Homo sapiens utrophin protein.             31   8.7  
AL513184-1|CAI40502.1| 3433|Homo sapiens utrophin protein.             31   8.7  
AL357149-1|CAI40388.1| 3433|Homo sapiens utrophin protein.             31   8.7  
AL024474-3|CAI23354.1|   47|Homo sapiens utrophin protein.             31   8.7  
AL024474-2|CAI23353.1| 3433|Homo sapiens utrophin protein.             31   8.7  

>X69086-1|CAA48829.1| 3433|Homo sapiens utrophin (dystrophin related
           protein) protein.
          Length = 3433

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 638 ISKSSDYHNDMNSTNFLKWMNEKF 709
           I   SD HND+    F KW+N +F
Sbjct: 22  IKSRSDEHNDVQKKTFTKWINARF 45


>AL590704-2|CAI10895.1|   47|Homo sapiens utrophin protein.
          Length = 47

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 638 ISKSSDYHNDMNSTNFLKWMNEKF 709
           I   SD HND+    F KW+N +F
Sbjct: 22  IKSRSDEHNDVQKKTFTKWINARF 45


>AL590704-1|CAI10894.1| 3433|Homo sapiens utrophin protein.
          Length = 3433

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 638 ISKSSDYHNDMNSTNFLKWMNEKF 709
           I   SD HND+    F KW+N +F
Sbjct: 22  IKSRSDEHNDVQKKTFTKWINARF 45


>AL590488-1|CAI16497.1| 3433|Homo sapiens utrophin protein.
          Length = 3433

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 638 ISKSSDYHNDMNSTNFLKWMNEKF 709
           I   SD HND+    F KW+N +F
Sbjct: 22  IKSRSDEHNDVQKKTFTKWINARF 45


>AL513475-1|CAI13032.1| 3433|Homo sapiens utrophin protein.
          Length = 3433

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 638 ISKSSDYHNDMNSTNFLKWMNEKF 709
           I   SD HND+    F KW+N +F
Sbjct: 22  IKSRSDEHNDVQKKTFTKWINARF 45


>AL513184-1|CAI40502.1| 3433|Homo sapiens utrophin protein.
          Length = 3433

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 638 ISKSSDYHNDMNSTNFLKWMNEKF 709
           I   SD HND+    F KW+N +F
Sbjct: 22  IKSRSDEHNDVQKKTFTKWINARF 45


>AL357149-1|CAI40388.1| 3433|Homo sapiens utrophin protein.
          Length = 3433

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 638 ISKSSDYHNDMNSTNFLKWMNEKF 709
           I   SD HND+    F KW+N +F
Sbjct: 22  IKSRSDEHNDVQKKTFTKWINARF 45


>AL024474-3|CAI23354.1|   47|Homo sapiens utrophin protein.
          Length = 47

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 638 ISKSSDYHNDMNSTNFLKWMNEKF 709
           I   SD HND+    F KW+N +F
Sbjct: 22  IKSRSDEHNDVQKKTFTKWINARF 45


>AL024474-2|CAI23353.1| 3433|Homo sapiens utrophin protein.
          Length = 3433

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 638 ISKSSDYHNDMNSTNFLKWMNEKF 709
           I   SD HND+    F KW+N +F
Sbjct: 22  IKSRSDEHNDVQKKTFTKWINARF 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,520,621
Number of Sequences: 237096
Number of extensions: 2617816
Number of successful extensions: 5139
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5139
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13378564892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)