Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1c02
         (1003 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012343-1|AAS77468.1|  346|Drosophila melanogaster AT08472p pro...    31   3.3  
AE014298-1819|AAF48208.2|  346|Drosophila melanogaster CG32650-P...    31   3.3  
BT012487-1|AAS93758.1|  241|Drosophila melanogaster LD11652p pro...    29   7.6  
AE014134-1785|AAN10724.1|  241|Drosophila melanogaster CG5708-PB...    29   7.6  
AE014134-1784|AAF52877.2|  241|Drosophila melanogaster CG5708-PA...    29   7.6  

>BT012343-1|AAS77468.1|  346|Drosophila melanogaster AT08472p
           protein.
          Length = 346

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 495 HSTYHSRSCWQSEEESGLFTSDSVGSRWIIAHAGIE 602
           H     RSCW+ E+E+     +   SRW+I H   E
Sbjct: 75  HERDGGRSCWEEEQEALAKGLEPEDSRWMIMHGSRE 110


>AE014298-1819|AAF48208.2|  346|Drosophila melanogaster CG32650-PA
           protein.
          Length = 346

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 495 HSTYHSRSCWQSEEESGLFTSDSVGSRWIIAHAGIE 602
           H     RSCW+ E+E+     +   SRW+I H   E
Sbjct: 75  HERDGGRSCWEEEQEALAKGLEPEDSRWMIMHGSRE 110


>BT012487-1|AAS93758.1|  241|Drosophila melanogaster LD11652p
           protein.
          Length = 241

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 494 DISLIYEYDRSFFSGSIRMSCFNTASNLFNVGSSCFT 384
           D  L+Y  DR + +G ++  C    + L  VGSSCFT
Sbjct: 87  DRYLLYALDRYWHNGCLKCHC--CGAMLAEVGSSCFT 121


>AE014134-1785|AAN10724.1|  241|Drosophila melanogaster CG5708-PB,
           isoform B protein.
          Length = 241

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 494 DISLIYEYDRSFFSGSIRMSCFNTASNLFNVGSSCFT 384
           D  L+Y  DR + +G ++  C    + L  VGSSCFT
Sbjct: 87  DRYLLYALDRYWHNGCLKCHC--CGAMLAEVGSSCFT 121


>AE014134-1784|AAF52877.2|  241|Drosophila melanogaster CG5708-PA,
           isoform A protein.
          Length = 241

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 494 DISLIYEYDRSFFSGSIRMSCFNTASNLFNVGSSCFT 384
           D  L+Y  DR + +G ++  C    + L  VGSSCFT
Sbjct: 87  DRYLLYALDRYWHNGCLKCHC--CGAMLAEVGSSCFT 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,965,992
Number of Sequences: 53049
Number of extensions: 771281
Number of successful extensions: 1361
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5078842344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)