Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1c01
(831 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 47 2e-05
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 45 9e-05
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 42 5e-04
10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758... 42 8e-04
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 41 0.001
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 39 0.004
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 39 0.006
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 39 0.006
11_04_0293 + 15926561-15928834 36 0.030
02_01_0455 + 3266123-3266258,3266348-3266670,3267083-3267661,326... 35 0.069
12_01_0335 - 2583476-2583493,2583919-2583965,2584151-2584274,258... 35 0.091
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 33 0.21
11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335... 33 0.37
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 33 0.37
03_02_0023 + 5065962-5066079,5066179-5067614 31 0.85
07_01_0378 + 2826421-2826427,2827286-2827375,2827400-2827639,282... 31 1.1
01_01_0529 + 3874865-3876285,3876352-3876367 31 1.5
08_02_0230 - 14572854-14574632 30 2.0
06_03_0573 + 22407489-22408373,22408460-22408795 29 3.4
09_02_0177 - 5390594-5390692,5391924-5391998,5392843-5392942,539... 29 4.5
07_03_0842 - 21952483-21954135,21957361-21958108,21958266-21958534 29 4.5
12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387 29 6.0
05_01_0167 - 1153778-1153927,1154006-1154797,1155602-1156408,115... 28 7.9
03_06_0297 - 32924162-32924605 28 7.9
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 46.8 bits (106), Expect = 2e-05
Identities = 46/209 (22%), Positives = 84/209 (40%)
Frame = +3
Query: 198 NEALGKCKFGRFHIHLLFVSFAGSVASVLVTHTTSYLITSAECDLNMDLIEKGMLNASPY 377
+EAL FG+F + +L + G V + S++ + N+ + +L++ +
Sbjct: 202 DEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVF 261
Query: 378 LGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAIS 557
G L + GF++D +GR+ S Y LL +F G+
Sbjct: 262 AGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVGIGVG-G 320
Query: 558 LSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDGKFVLNT 737
++ EF + R +V + F I I+ ++AW +++ VL+
Sbjct: 321 AHVFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVIS------------VLS- 367
Query: 738 WNFYLFAVSLWSFLACILYSRLPESPKYL 824
W + L +L L + PESP+YL
Sbjct: 368 WRWLLALTALPCSLLIPFFGTTPESPRYL 396
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 44.8 bits (101), Expect = 9e-05
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Frame = +3
Query: 246 LFVSFAGSVASVL-----VTHTTSYLITSAECDLNMDLIEKGMLNASPYLGSLFSSVLAG 410
+ V+ A S+ ++L T + L E +L + + +G++ A +G+ + +G
Sbjct: 5 VLVAIAASIGNLLQGWDNATIAGAVLYIKKEFNLQSEPLIEGLIVAMSLIGATIITTFSG 64
Query: 411 FLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAISLSASVTYISEF 590
+ D+FGR+ + VLL A+ +G ++++ YISE
Sbjct: 65 AVADSFGRRPMLIASAVLYFVSGLVMLWAPNVYVLLLARLIDGFGIGLAVTLVPLYISET 124
Query: 591 CHNEIRDRLVVSQTSFAAIAQIISTAMAWG--ILTQ-DWRVVFLDGKFVLNTWNFYLFAV 761
+IR L + +S M +G ++ Q DWR++ VL+ + FA+
Sbjct: 125 APTDIRGLLNTLPQFSGSGGMFLSYCMVFGMSLMPQPDWRIML----GVLSIPSLIYFAL 180
Query: 762 SLWSFLACILYSRLPESPKYLLT 830
+ I Y LPESP++L++
Sbjct: 181 T-------IFY--LPESPRWLVS 194
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 42.3 bits (95), Expect = 5e-04
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Frame = +3
Query: 354 GMLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFF 533
G + A+ +LG S+V G D +GRK S TY + + +
Sbjct: 87 GFVGATYFLGRTISAVPWGIFADKYGRKPCIVISILSVIVFNTLFGLSTTYWMAIVTRGL 146
Query: 534 EGMCFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVV-- 707
G+ I L Y SE C E + + TS AIA ++ A+ G L+Q +
Sbjct: 147 LGLLCGI-LGPIKAYASEVCRKEHQALGISLVTSSRAIALVVGPAIG-GFLSQPAKKYPN 204
Query: 708 FLDGKFVLNTWNFYL--FAVSLWSFLACILYSRLPES 812
+ V + ++L F +S+ + AC+ LPE+
Sbjct: 205 LFSEESVFGRFPYFLPCFVISVLAAGACVACIWLPET 241
>10_08_1053 -
22575281-22575409,22575516-22575653,22575786-22575884,
22576281-22576361,22577171-22577233,22577473-22577520,
22577622-22577990,22578082-22578183,22578290-22578414,
22578500-22578566,22578817-22578895,22578928-22579079,
22579182-22579223
Length = 497
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/93 (21%), Positives = 44/93 (47%)
Frame = +3
Query: 381 GSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAISL 560
G+L S+LA + D GR+R ++ + +++ +FF G+ +++
Sbjct: 98 GALIGSILAFNIADFLGRRRELILSSVSYLIGALLTAAAPNFPIMVVGRFFYGIGIGLAM 157
Query: 561 SASVTYISEFCHNEIRDRLVVSQTSFAAIAQII 659
A+ YI+E ++IR L+ + F + ++
Sbjct: 158 HAAPMYIAETAPSQIRGMLISLKEFFIVLGMLL 190
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 41.1 bits (92), Expect = 0.001
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 8/201 (3%)
Frame = +3
Query: 252 VSFAGSVASVL-----VTHTTSYLITSAECDLNMDLIEKGMLNASPYLGSLFSSVLAGFL 416
V+ A S+ ++L T + L E L + +G++ A +G+ + +G +
Sbjct: 36 VAIAASIGNLLQGWDNATIAGAVLYIKKEFKLESEPTVEGLIVAMSLIGATIITTFSGPV 95
Query: 417 TDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAISLSASVTYISEFCH 596
+D GR+ S VLL A+ +G ++++ YISE
Sbjct: 96 SDWIGRRPMLILSSILYFLSSLIMLWSPNVYVLLLARLIDGFGIGLAVTLVPLYISETAP 155
Query: 597 NEIRDRLVVSQTSFAAIAQIISTAMAWG---ILTQDWRVVFLDGKFVLNTWNFYLFAVSL 767
+EIR L + +S M +G + + DWR++ L SL
Sbjct: 156 SEIRGLLNTLPQFSGSGGMFLSYCMVFGMSLLPSPDWRIML-----------GVLAIPSL 204
Query: 768 WSFLACILYSRLPESPKYLLT 830
+ F I Y LPESP++L++
Sbjct: 205 FFFGLTIFY--LPESPRWLVS 223
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/123 (27%), Positives = 49/123 (39%)
Frame = +3
Query: 354 GMLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFF 533
G + AS +L FSSV G D +GRK S Y + + +
Sbjct: 40 GFVAASYFLARTFSSVPWGIFADKYGRKPCIVISILSVIFFNTLFGLSTRYWMAIVTRGM 99
Query: 534 EGMCFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFL 713
GM I L Y +E C E + + TS A+A ++ A+ G L Q+ +
Sbjct: 100 LGMLCGI-LGPIKAYATEICRKEHQALGMSLVTSSRAVAFVLGPAIG-GFLAQETLHLHN 157
Query: 714 DGK 722
DGK
Sbjct: 158 DGK 160
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 38.7 bits (86), Expect = 0.006
Identities = 38/148 (25%), Positives = 59/148 (39%)
Frame = +3
Query: 381 GSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAISL 560
G++ + G++ D FGRK + T V++ + F G+ ++
Sbjct: 78 GAIVGAGFGGWMNDKFGRKPSILIADSLFLAGALIMALAPTPFVIIIGRIFVGLGVGMAS 137
Query: 561 SASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDGKFVLNTW 740
+ YISE IR LV + Q MA+ I + F K TW
Sbjct: 138 MTAPLYISEASPARIRGALVSTNGLLITGGQF----MAYLI-----NLAFTKVK---GTW 185
Query: 741 NFYLFAVSLWSFLACILYSRLPESPKYL 824
+ L L +F+ IL LPESP++L
Sbjct: 186 RWMLGIAGLPAFIQFILMCMLPESPRWL 213
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 38.7 bits (86), Expect = 0.006
Identities = 32/149 (21%), Positives = 60/149 (40%)
Frame = +3
Query: 378 LGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAIS 557
+G++ + G++ DT+GR++ ++ +L+ + G+ I+
Sbjct: 82 VGAIIGAAGGGWINDTYGRRKSTLVADMLFALGSLVMCAAGGPYILILGRLLVGLGVGIA 141
Query: 558 LSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDGKFVLNT 737
+ YI+E +EIR LV + Q S + G V T
Sbjct: 142 SVTAPVYIAEAAPSEIRGGLVSTNVLMITGGQFFSYLINLGFTE------------VPGT 189
Query: 738 WNFYLFAVSLWSFLACILYSRLPESPKYL 824
W + L ++ + L +L LPESP++L
Sbjct: 190 WRWMLGVAAVPAILQFVLMLFLPESPRWL 218
>11_04_0293 + 15926561-15928834
Length = 757
Score = 36.3 bits (80), Expect = 0.030
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 3/163 (1%)
Frame = +3
Query: 351 KGMLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKF 530
+G++ A +G+ + +G ++D GR+ S VLL A+
Sbjct: 45 EGLVVAMSLIGATIITTFSGPVSDLVGRRPMLIASSLLYFAGGLIMLWSPNVYVLLLARL 104
Query: 531 FEGMCFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGIL---TQDWR 701
+G ++++ YISE EIR RL + +S M + + + +WR
Sbjct: 105 VDGFGVGLAVTLVPVYISETSPPEIRGRLNTLPQFTGSGGMFMSYCMIFAMTLSPSPNWR 164
Query: 702 VVFLDGKFVLNTWNFYLFAVSLWSFLACILYSRLPESPKYLLT 830
++ LF SL + Y LPESP++L++
Sbjct: 165 IML-----------GVLFVPSLLYLFVTVFY--LPESPRWLVS 194
>02_01_0455 +
3266123-3266258,3266348-3266670,3267083-3267661,
3267866-3268336
Length = 502
Score = 35.1 bits (77), Expect = 0.069
Identities = 27/121 (22%), Positives = 48/121 (39%)
Frame = +3
Query: 255 SFAGSVASVLVTHTTSYLITSAECDLNMDLIEKGMLNASPYLGSLFSSVLAGFLTDTFGR 434
SF V+ +IT+ C + ++ + +S +L ++ + + A ++ FGR
Sbjct: 53 SFLAMFFPVIFEQQQERVITNQYCKFDSQVLT--LFGSSLFLSAMVAGIFASPMSRAFGR 110
Query: 435 KRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAISLSASVTYISEFCHNEIRDR 614
K S + VLLT + G+ + + AS YISE + R
Sbjct: 111 KWTLFVAAVAYLIGAILGAISFNFIVLLTGRLLLGVGVGVCIHASPLYISEMAPAQQRGM 170
Query: 615 L 617
L
Sbjct: 171 L 171
>12_01_0335 -
2583476-2583493,2583919-2583965,2584151-2584274,
2584421-2584665,2585281-2585404,2585424-2585456
Length = 196
Score = 34.7 bits (76), Expect = 0.091
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 233 PHPFALCVFCWISSKCAGDPHYILPYNFGRMRSEHGS 343
P F C+ C +S+C DP YI + FGR S H S
Sbjct: 109 PDDFLSCLICMEASQC-DDPRYIPKHKFGRHMSRHHS 144
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/82 (19%), Positives = 40/82 (48%)
Frame = +3
Query: 195 LNEALGKCKFGRFHIHLLFVSFAGSVASVLVTHTTSYLITSAECDLNMDLIEKGMLNASP 374
++EAL FG+F +L S ++ + S++ S + + + + ++ +
Sbjct: 34 VDEALISMGFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESLITSVV 93
Query: 375 YLGSLFSSVLAGFLTDTFGRKR 440
++G L + G ++D +GR++
Sbjct: 94 FVGMLVGAYSWGIVSDNYGRRQ 115
>11_06_0421 +
23331702-23331723,23332161-23332197,23333397-23333533,
23333675-23334241,23335068-23335777,23335915-23336102,
23336489-23336918
Length = 696
Score = 32.7 bits (71), Expect = 0.37
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 3/162 (1%)
Frame = +3
Query: 354 GMLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFF 533
G++ A GS+ +V +G L D GR+ S +LL A+
Sbjct: 85 GIILAVSVFGSIAITVFSGSLLDWLGRRAALIYSSLLLISGGLLMVWSPNIYILLLARLI 144
Query: 534 EGMCFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMA-WGIL--TQDWRV 704
G + + YISE +R L + + S + W L + +WR+
Sbjct: 145 VGSGSGLVFTCVPIYISETSPPNMRGSLGTMPQFMFFVGIVFSYCLIFWMTLIPSPNWRI 204
Query: 705 VFLDGKFVLNTWNFYLFAVSLWSFLACILYSRLPESPKYLLT 830
+ G +FA SL F + Y LPESP++L++
Sbjct: 205 MI--GA---------IFAPSLVYFALLVFY--LPESPRWLVS 233
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 32.7 bits (71), Expect = 0.37
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 12/165 (7%)
Frame = +3
Query: 354 GMLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFF 533
G + AS G SSV+ G + D +GRK S +Y + LT++
Sbjct: 139 GFVGASYMFGRALSSVIWGIVADKYGRKPIIIITLISIIIFNTLFGLSSSYWMALTSRGL 198
Query: 534 EG-MCFAIS-------LSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILT 689
G MC + +S Y +E C E + +S I I+ A+ G L
Sbjct: 199 LGLMCGILGPIKHYFLISVFQAYATEVCRKEHGHLGLSLVSSSRGIGLIVGPAIG-GYLA 257
Query: 690 Q--DWRVVFLDGKFVLNTWNFYL--FAVSLWSFLACILYSRLPES 812
Q D K + + ++L +SL + +A + LPE+
Sbjct: 258 QPADKYPSIFSEKSIFGRFPYFLPCLCISLLAIVALLASFWLPET 302
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 31.5 bits (68), Expect = 0.85
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 4/116 (3%)
Frame = +3
Query: 384 SLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAISLS 563
SLF S+ AG +D GR+ + Y L+ +F G+ +L
Sbjct: 73 SLFGSLAAGMTSDWLGRRYTMVLAAAIFFTGALLMGLAPNYAFLMAGRFVAGIGVGYALM 132
Query: 564 ASVTYISEFCHNEIRDRLV----VSQTSFAAIAQIISTAMAWGILTQDWRVVFLDG 719
+ Y +E R L V S + + + A A + WR +FL G
Sbjct: 133 IAPVYTAEVAPTSARGFLTSFPEVFNNSGILLGYVSNFAFARLPVHLSWRAMFLVG 188
>07_01_0378 +
2826421-2826427,2827286-2827375,2827400-2827639,
2827722-2828035,2828604-2828696,2828789-2828977
Length = 310
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 548 RNIIKCFSNLYIRILPQ*D*RQVSGQPNVFCGYCSN-YQYRDGMGNT 685
RN+ +N R +PQ +Q SG N + GY SN Y G GNT
Sbjct: 82 RNLSANVNNPVSRPMPQRPWQQTSGYGNTYGGYGSNMYSSYGGFGNT 128
>01_01_0529 + 3874865-3876285,3876352-3876367
Length = 478
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 320 CRSYKVRCSVGHQHTCY*SSKRHKEQMDVESSEFTF 213
C SY S+ HQ+T Y +++R E++ SSE +
Sbjct: 430 CTSYSKNGSLSHQNTTYMTARRMSERLSFISSEMPY 465
>08_02_0230 - 14572854-14574632
Length = 592
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = -3
Query: 334 FRSHSAEVIR*DVVWVTSTLATDPAKDTKSKWMWNRPNLHFPSAS-----FSSCIGVTLS 170
+R+HSA +VV ++ + PA+DT+ W + N FP G L
Sbjct: 516 WRTHSAGACAGEVVIASAAVLPPPAEDTRWDRAWYKYNCDFPVLGKGPPWIWDGTGYKLH 575
Query: 169 FPIAP 155
FPI P
Sbjct: 576 FPILP 580
>06_03_0573 + 22407489-22408373,22408460-22408795
Length = 406
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 814 GLSGNREYKMQARKDHKDTANK*KFQVFSTNLPSKNTTRQSWVS 683
G +G+R+ K+ D D NK + + LP T R++W++
Sbjct: 338 GQTGSRKRKLVLNDDEGDDGNKSGNKGLTNKLPKHTTPRKNWLA 381
>09_02_0177 -
5390594-5390692,5391924-5391998,5392843-5392942,
5393143-5393244,5393335-5393444,5393896-5393968,
5394976-5395043,5395382-5395475,5396804-5397165
Length = 360
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +2
Query: 317 GRMRSEHGSNRERHV 361
G++RS+HGSN+ RHV
Sbjct: 28 GKVRSQHGSNKARHV 42
>07_03_0842 - 21952483-21954135,21957361-21958108,21958266-21958534
Length = 889
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 615 LVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDGKFVLNTW 740
+VV + A+ + A AWG+LT+ R L V N W
Sbjct: 783 IVVLAVNVGAVGVAVGKAAAWGLLTEQGRFAVLG--MVFNVW 822
>12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387
Length = 487
Score = 28.7 bits (61), Expect = 6.0
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +3
Query: 249 FVSFAGSVASVLVTH----TTSYLITSAECDLNMDLIEKGMLNASPYLGSLFSSVLAGFL 416
F + S+ SVL+ + T+ I AE DL + + +L+ + + SL ++LAG+
Sbjct: 33 FCAVLASMTSVLMGYNVAVTSGAQIFMAE-DLGVSDAQIEVLSGAINIYSLVGALLAGWT 91
Query: 417 TDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAISLSASVTYISE 587
+D GR+ + Y L+ +F G+ +L + Y +E
Sbjct: 92 SDRLGRRLTIVLTNGFFLAGPLVMSLAGGYAALMAGRFVAGIGVGYALVIAPVYAAE 148
>05_01_0167 -
1153778-1153927,1154006-1154797,1155602-1156408,
1156514-1156618,1156985-1157059,1157160-1157233,
1157388-1157450,1157549-1157647,1157704-1157811,
1157908-1157973,1158073-1158150,1158257-1158304,
1158381-1158440,1158527-1158610,1158902-1158949,
1159049-1159096,1161462-1161579
Length = 940
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 799 REYKMQARKDHKDTANK*KFQVFSTNLPSKNTTRQS 692
+ YKMQ +D+ + NK + + KNTT Q+
Sbjct: 148 QSYKMQENRDNIKSGNKGHLSDIGSKIEKKNTTNQT 183
>03_06_0297 - 32924162-32924605
Length = 147
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 807 QVTVNIKCKPGKTTKIPRTNKNSKCLVRIYRPKIRRASPGLVFPMP 670
+ V ++C ++P T+++ + L I P A PGL PMP
Sbjct: 36 RAAVGVRCGGTPPAEVPGTDRSLEELPSIDTPPEFEAPPGLDVPMP 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,264,521
Number of Sequences: 37544
Number of extensions: 467868
Number of successful extensions: 999
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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