Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1c01
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 56 3e-08
U43375-7|AAA83624.1| 271|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 36 0.047
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 36 0.047
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 35 0.062
Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical pr... 35 0.062
U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical pr... 35 0.082
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 35 0.082
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 34 0.11
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 34 0.11
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 34 0.11
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 31 0.77
U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 30 2.3
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 29 3.1
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 29 4.1
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 29 4.1
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 29 4.1
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 29 4.1
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 29 5.4
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 28 9.4
AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical ... 28 9.4
AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 56.0 bits (129), Expect = 3e-08
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 3/183 (1%)
Frame = +3
Query: 168 NDKVTPMQELNEALGKCKFGRFHIHLLFVSFAGSVASVLVTHTTSYLITSAECDLNMDLI 347
++K + E EALG FGRF + L ++ +A + S + + C+ + +
Sbjct: 63 SEKTFTVDEAVEALG---FGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSV 119
Query: 348 EKGMLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAK 527
++ ++ + G + SS G + D FGR++ S + VLL
Sbjct: 120 QQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLL--- 176
Query: 528 FFEGMC-FAIS-LSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQ-DW 698
FF G+ F I + SVT +EF R + VV SF AI + +A+ ++ W
Sbjct: 177 FFRGLTGFGIGGVPQSVTLYAEFLPTAQRAKCVVLIESFWAIGAVFEALLAYFVMESFGW 236
Query: 699 RVV 707
R +
Sbjct: 237 RAL 239
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 56.0 bits (129), Expect = 3e-08
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 3/183 (1%)
Frame = +3
Query: 168 NDKVTPMQELNEALGKCKFGRFHIHLLFVSFAGSVASVLVTHTTSYLITSAECDLNMDLI 347
++K + E EALG FGRF + L ++ +A + S + + C+ + +
Sbjct: 63 SEKTFTVDEAVEALG---FGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSV 119
Query: 348 EKGMLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAK 527
++ ++ + G + SS G + D FGR++ S + VLL
Sbjct: 120 QQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLL--- 176
Query: 528 FFEGMC-FAIS-LSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQ-DW 698
FF G+ F I + SVT +EF R + VV SF AI + +A+ ++ W
Sbjct: 177 FFRGLTGFGIGGVPQSVTLYAEFLPTAQRAKCVVLIESFWAIGAVFEALLAYFVMESFGW 236
Query: 699 RVV 707
R +
Sbjct: 237 RAL 239
>U43375-7|AAA83624.1| 271|Caenorhabditis elegans Hypothetical
protein K09C4.4 protein.
Length = 271
Score = 38.3 bits (85), Expect = 0.007
Identities = 31/111 (27%), Positives = 50/111 (45%)
Frame = +3
Query: 495 SQTYEVLLTAKFFEGMCFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMA 674
SQ+ E + +K FEG+ + + +I+E ++ R S I ++I +A
Sbjct: 74 SQSAEFFIMSKLFEGLQHPLGTFLTALFIAECAPDKNRGFACTSLVVLVGIVRMIMLPIA 133
Query: 675 WGILTQDWRVVFLDGKFVLNTWNFYLFAVSLWSFLACILYSRLPESPKYLL 827
+ GK +TW + A + SFL I RLPESPK+L+
Sbjct: 134 SPAVL---------GK--ADTWFVFPLAALISSFLVLIWVCRLPESPKWLV 173
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.047
Identities = 29/110 (26%), Positives = 46/110 (41%)
Frame = +3
Query: 375 YLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAI 554
YLG L +VL G L+D +GRK S ++L A+F G+ A
Sbjct: 93 YLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLSPNRQLLFIARFCSGLSIAG 152
Query: 555 SLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRV 704
L +I E + R+V+ ++ T + + LTQ+WR+
Sbjct: 153 VLVCICAWILESILS--HQRMVIRAFFNWGWTRVFITVVCY--LTQEWRL 198
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 35.5 bits (78), Expect = 0.047
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Frame = +3
Query: 369 SPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCF 548
S +G + S +AG L+D +GRK+ S + EV + +FF G+C
Sbjct: 120 SQMIGIMLGSAIAGQLSDLYGRKKITLLFLCMMLFFSTSSSFSSSIEVFIIVRFFIGICC 179
Query: 549 -AISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDGKF 725
++ S+ + RL +S A ++ A+ +T +WR +
Sbjct: 180 GGLTTVGSILVVENL---PSAHRLWMSTVVTWAPNYMLFALFAY--ITGEWRCL----AR 230
Query: 726 VLNTWNFYLFAVSLWSFLACILYSRLPESPKYLL 827
+ N + A+ + +FL LPESPKYL+
Sbjct: 231 MCNAMT--VIAILICAFL-------LPESPKYLI 255
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 35.1 bits (77), Expect = 0.062
Identities = 39/154 (25%), Positives = 61/154 (39%)
Frame = +3
Query: 363 NASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGM 542
+ S +LG+L +++ G+L+DT GR+ + +F G
Sbjct: 110 STSTFLGTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIFRFLVGF 169
Query: 543 CFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDGK 722
A +L+ TY SE R RL A A+++ ++W L +WR+
Sbjct: 170 AIAGTLTVGWTYASEMVIPSRRFRLRTFPN--WANARMMQVGVSW--LAGEWRLA----- 220
Query: 723 FVLNTWNFYLFAVSLWSFLACILYSRLPESPKYL 824
YL A + L I Y LPESP +L
Sbjct: 221 -------SYLCAALSATVLPMIWY--LPESPVFL 245
>Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical
protein T05A1.5b protein.
Length = 343
Score = 35.1 bits (77), Expect = 0.062
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 18/128 (14%)
Frame = +3
Query: 219 KFGRFHIHLLFVSFAGS---VASVLVTHTTSYLITSAECDLN--------------MDLI 347
+ G +H + LF++F+ + + SV+ T + SY+ S+ C L+ LI
Sbjct: 59 QIGIWHPYPLFITFSMAFLWLLSVMPTMSPSYMAPSSPCTLDNCSFVTVQNEFNITKTLI 118
Query: 348 EKGMLNASPY-LGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTA 524
+ G + +S + LG+ + D GR+ + T+E++L
Sbjct: 119 DPGEMTSSIFFLGNGILGQIYAVAADRIGRRPVLIASLFISGLSGIGAAYAPTFEIMLIG 178
Query: 525 KFFEGMCF 548
+FF+G CF
Sbjct: 179 RFFQGSCF 186
>Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical
protein T05A1.5a protein.
Length = 359
Score = 35.1 bits (77), Expect = 0.062
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 18/128 (14%)
Frame = +3
Query: 219 KFGRFHIHLLFVSFAGS---VASVLVTHTTSYLITSAECDLN--------------MDLI 347
+ G +H + LF++F+ + + SV+ T + SY+ S+ C L+ LI
Sbjct: 75 QIGIWHPYPLFITFSMAFLWLLSVMPTMSPSYMAPSSPCTLDNCSFVTVQNEFNITKTLI 134
Query: 348 EKGMLNASPY-LGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTA 524
+ G + +S + LG+ + D GR+ + T+E++L
Sbjct: 135 DPGEMTSSIFFLGNGILGQIYAVAADRIGRRPVLIASLFISGLSGIGAAYAPTFEIMLIG 194
Query: 525 KFFEGMCF 548
+FF+G CF
Sbjct: 195 RFFQGSCF 202
>U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical
protein B0361.11 protein.
Length = 534
Score = 34.7 bits (76), Expect = 0.082
Identities = 34/151 (22%), Positives = 59/151 (39%)
Frame = +3
Query: 378 LGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAIS 557
+G++ + L D +GRK S + + L + F G C
Sbjct: 155 IGAVIAVPFMSMLADRYGRKPIIVTTAILAFLANMAASFSPNFAIFLILRAFIGACSDSY 214
Query: 558 LSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDGKFVLNT 737
LS + E+ + R + V ++ + + + ++T DWR + F+++
Sbjct: 215 LSVASVATCEYLSEKARAWITVVYNVAWSLGMVWTLLVT--LMTDDWRWRY----FIVSL 268
Query: 738 WNFYLFAVSLWSFLACILYSRLPESPKYLLT 830
Y FA LW FL PESP +L+T
Sbjct: 269 PGVYGFA--LWYFL--------PESPHWLIT 289
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 34.7 bits (76), Expect = 0.082
Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Frame = +3
Query: 357 MLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQ----TYEVLLTA 524
+LN + ++F LAG++ FGRK +++ +E+L
Sbjct: 94 LLNVCFPIATIFGQFLAGWMCSQFGRKHTALIASFLYIPGALLCAAAKWCFPAFELLFVG 153
Query: 525 KFFEGMCFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQD-WR 701
+ + ++ + +I E +IR R+ Q F A+ +++ A+ T + W
Sbjct: 154 RIIWSLANGVNTVNATVWIVECAPPQIRGRMAAMQEFFMALGSLLTQAVGVPFSTDELWP 213
Query: 702 VVFL 713
FL
Sbjct: 214 YNFL 217
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Frame = +3
Query: 375 YLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAI 554
Y+GS + L G++ D FGR+R ++ E + +FF G+ F
Sbjct: 162 YVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPA 221
Query: 555 SLSASVTYISEFCHN--EIRDRLVVSQTSFAAIAQIISTAM 671
EF N I L+ S AA+A + AM
Sbjct: 222 LFQIPFIICMEFMGNSGRIFSGLMTSLFFGAAMALLGVVAM 262
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Frame = +3
Query: 375 YLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAI 554
Y+GS + L G++ D FGR+R ++ E + +FF G+ F
Sbjct: 145 YVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPA 204
Query: 555 SLSASVTYISEFCHN--EIRDRLVVSQTSFAAIAQIISTAM 671
EF N I L+ S AA+A + AM
Sbjct: 205 LFQIPFIICMEFMGNSGRIFSGLMTSLFFGAAMALLGVVAM 245
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Frame = +3
Query: 375 YLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAI 554
Y+GS + L G++ D FGR+R ++ E + +FF G+ F
Sbjct: 145 YVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPA 204
Query: 555 SLSASVTYISEFCHN--EIRDRLVVSQTSFAAIAQIISTAM 671
EF N I L+ S AA+A + AM
Sbjct: 205 LFQIPFIICMEFMGNSGRIFSGLMTSLFFGAAMALLGVVAM 245
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 34.3 bits (75), Expect = 0.11
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 3/154 (1%)
Frame = +3
Query: 378 LGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQT---YEVLLTAKFFEGMCF 548
+G +F S +GFL D FGRK +S+ Y +++ +F G+
Sbjct: 109 VGGMFGSFCSGFLADKFGRKSTLLYNNILALLAAVCLSTSKLFNFYPMIVFGRFLVGLNC 168
Query: 549 AISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDGKFV 728
I+ +++E +R + ++A ++S A+ L Q +F G V
Sbjct: 169 GITSGLVPMFLTELAPANLRGKCGSFHQLNISVAIVLSQALG---LPQ----IF--GTQV 219
Query: 729 LNTWNFYLFAVSLWSFLACILYSRLPESPKYLLT 830
W + V++ +FL ESPKYL++
Sbjct: 220 --GWPYIFACVAIPTFLQLATIPFCVESPKYLIS 251
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 342 LIEKGMLNASPY-LGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLL 518
L+E L S Y LG+L L + D FGR+ + + +LL
Sbjct: 125 LVEPAELTTSIYFLGNLLIGQLFAVVADRFGRRPIIIICLLLTGIVGSLGSLAPNFPLLL 184
Query: 519 TAKFFEGMCF 548
A+F +G C+
Sbjct: 185 VARFIQGSCY 194
>U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical
protein K09C4.5 protein.
Length = 515
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 732 NTWNFYLFAVSLWSFLACILYSRLPESPKYLL 827
NTW + AV + S + + RLPESPK+L+
Sbjct: 182 NTWVIFPLAVLMSSTVIFFMTLRLPESPKWLV 213
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/118 (20%), Positives = 48/118 (40%)
Frame = +3
Query: 351 KGMLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKF 530
K + + + G L + G ++D GRK + Y+VLL +F
Sbjct: 84 KSLFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRF 143
Query: 531 FEGMCFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRV 704
F G+ +L T++ E + R+ + +A+++ T +A + +WR+
Sbjct: 144 FLGLSVGGTLVVVCTFVMEMLLPQ--QRMALRAFFNWGVARLMMTLIAMAL--PEWRM 197
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/118 (20%), Positives = 48/118 (40%)
Frame = +3
Query: 351 KGMLNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKF 530
K + + + G L + G ++D GRK + Y+VLL +F
Sbjct: 84 KSLFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRF 143
Query: 531 FEGMCFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRV 704
F G+ +L T++ E + R+ + +A+++ T +A + +WR+
Sbjct: 144 FLGLSVGGTLVVVCTFVMEMLLPQ--QRMALRAFFNWGVARLMMTLIAMAL--PEWRM 197
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 29.5 bits (63), Expect = 3.1
Identities = 35/155 (22%), Positives = 65/155 (41%)
Frame = +3
Query: 360 LNASPYLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEG 539
L+ + ++G+L ++ GFL D +GR+ + + G
Sbjct: 118 LSTATFIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIG 177
Query: 540 MCFAISLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDG 719
+ + +L+ TY +E R R++ S A++I +A+ ++Q+W+
Sbjct: 178 ISVSGTLTVGWTYATEMISPNRRLRILA--FSNWPNARMIQVGLAY--ISQEWK------ 227
Query: 720 KFVLNTWNFYLFAVSLWSFLACILYSRLPESPKYL 824
T + AVS S L ++Y LPESP +L
Sbjct: 228 -----TATYICAAVSCLS-LPILIY--LPESPIWL 254
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 654 IISTAMAWGILTQ-DWRVVFLDGKFVLNTWNFYLFAVSLWSFLACILYSRL 803
+ +T + ILTQ DW +V +G N W L+ V+L +F +L++ L
Sbjct: 873 LFATVTVFQILTQEDWNMVLFNGMAQTNPW-AALYFVALMTFGNYVLFNLL 922
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 654 IISTAMAWGILTQ-DWRVVFLDGKFVLNTWNFYLFAVSLWSFLACILYSRL 803
+ +T + ILTQ DW +V +G N W L+ V+L +F +L++ L
Sbjct: 832 LFATVTVFQILTQEDWNMVLFNGMAQTNPW-AALYFVALMTFGNYVLFNLL 881
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 654 IISTAMAWGILTQ-DWRVVFLDGKFVLNTWNFYLFAVSLWSFLACILYSRL 803
+ +T + ILTQ DW +V +G N W L+ V+L +F +L++ L
Sbjct: 832 LFATVTVFQILTQEDWNMVLFNGMAQTNPW-AALYFVALMTFGNYVLFNLL 881
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 654 IISTAMAWGILTQ-DWRVVFLDGKFVLNTWNFYLFAVSLWSFLACILYSRL 803
+ +T + ILTQ DW +V +G N W L+ V+L +F +L++ L
Sbjct: 873 LFATVTVFQILTQEDWNMVLFNGMAQTNPW-AALYFVALMTFGNYVLFNLL 922
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 28.7 bits (61), Expect = 5.4
Identities = 33/150 (22%), Positives = 62/150 (41%)
Frame = +3
Query: 375 YLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAI 554
Y+G L ++L G L+D FGR+ + + ++L +F G+
Sbjct: 93 YVGVLIGTLLFGSLSDRFGRRPIGILVISNAICSTFASGLAPSVKILFPLRFLVGLSIGG 152
Query: 555 SLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRVVFLDGKFVLN 734
L +I E + R+VV +I T++ + T++WR+
Sbjct: 153 MLVVICAWIMEVILPQ--QRMVVRGFFNWGWTRIFLTSICY--FTREWRLA--------- 199
Query: 735 TWNFYLFAVSLWSFLACILYSRLPESPKYL 824
Y+ ++SL L +++ +PESP +L
Sbjct: 200 ---TYVSSLSLIPALLLVIFV-IPESPVWL 225
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 27.9 bits (59), Expect = 9.4
Identities = 24/110 (21%), Positives = 44/110 (40%)
Frame = +3
Query: 375 YLGSLFSSVLAGFLTDTFGRKRXXXXXXXXXXXXXXXXXSSQTYEVLLTAKFFEGMCFAI 554
Y+G L +++ G++ D GRK+ + + + G+ A
Sbjct: 116 YVGVLIGNIILGYVADQIGRKKTFILSMLIGIPSLSLSATFNSIAAFYIFRALTGIGIAG 175
Query: 555 SLSASVTYISEFCHNEIRDRLVVSQTSFAAIAQIISTAMAWGILTQDWRV 704
++ Y SE R +L S A A+I+ T +A + T +WR+
Sbjct: 176 TMIVGWAYFSELVSPHQRFKL--RTFSNWANARIMLTLVA--LFTGEWRL 221
>AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical
protein Y45G12C.11 protein.
Length = 779
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 256 DTKSKWMWNRPNLHFPSASFSSCIGVTLSFPI 161
DTK+ WN N+HF S + + +L+F +
Sbjct: 91 DTKTPLDWNLENVHFLSVEYQKQLPFSLAFSL 122
>AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical
protein F56A4.6 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 256 DTKSKWMWNRPNLHFPSASFSSCIGVTLSFPI 161
DTK+ WN N+HF S + + +L+F +
Sbjct: 91 DTKTPLDWNLENVHFLSVEYQKQLPFSLAFSL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,663,570
Number of Sequences: 27780
Number of extensions: 423115
Number of successful extensions: 1078
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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