Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt1b23
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1...    30   7.5  
BC031604-1|AAH31604.1|  584|Homo sapiens C17orf71 protein protein.     30   10.0 
AK026858-1|BAB15576.1|  991|Homo sapiens protein ( Homo sapiens ...    30   10.0 
AF349467-1|AAL83913.1| 1023|Homo sapiens amplified in breast can...    30   10.0 

>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
            protein.
          Length = 3530

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
 Frame = +3

Query: 99   LDDYKCI---SDHLAAISKCIPGRGQIP--SQYEIPVFQFEIPYF--NATYVDHNLITRN 257
            LDD  C    +DH   + KC    G  P  S+ ++P+ +F I ++    TY  H  + +N
Sbjct: 1661 LDDQCCFPQATDH-TFLQKCHYHHGANPLYSKPKMPLPEFTIKHYAGKVTYQVHKFLDKN 1719

Query: 258  HDKCR 272
            HD+ R
Sbjct: 1720 HDQVR 1724


>BC031604-1|AAH31604.1|  584|Homo sapiens C17orf71 protein protein.
          Length = 584

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +3

Query: 345 ESNRTLAQHMSFKEDVVLSFYINGSYPL-IRLTTVFDKGNNFDLCSAFTFADLAGGLPIF 521
           E NRT A    +   ++ ++Y   S  L + LT++ D       C A    +  GGL + 
Sbjct: 120 EGNRTEAGSQDYS--LLQAYYSQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSLP 177

Query: 522 HINPNDQRTAQWLSKDLTLLHIYEREHI 605
           H   ++    Q   + L+LL+++   HI
Sbjct: 178 HAEAHEFWKHQEKLQCLSLLYLFSVCHI 205


>AK026858-1|BAB15576.1|  991|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23205 fis, clone ADSE00359. ).
          Length = 991

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +3

Query: 345 ESNRTLAQHMSFKEDVVLSFYINGSYPL-IRLTTVFDKGNNFDLCSAFTFADLAGGLPIF 521
           E NRT A    +   ++ ++Y   S  L + LT++ D       C A    +  GGL + 
Sbjct: 124 EGNRTEAGSQDYS--LLQAYYSQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSLP 181

Query: 522 HINPNDQRTAQWLSKDLTLLHIYEREHI 605
           H   ++    Q   + L+LL+++   HI
Sbjct: 182 HAEAHEFWKHQEKLQCLSLLYLFSVCHI 209


>AF349467-1|AAL83913.1| 1023|Homo sapiens amplified in breast cancer
           2 protein.
          Length = 1023

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +3

Query: 345 ESNRTLAQHMSFKEDVVLSFYINGSYPL-IRLTTVFDKGNNFDLCSAFTFADLAGGLPIF 521
           E NRT A    +   ++ ++Y   S  L + LT++ D       C A    +  GGL + 
Sbjct: 124 EGNRTEAGSQDYS--LLQAYYSQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSLP 181

Query: 522 HINPNDQRTAQWLSKDLTLLHIYEREHI 605
           H   ++    Q   + L+LL+++   HI
Sbjct: 182 HAEAHEFWKHQEKLQCLSLLYLFSVCHI 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,394,440
Number of Sequences: 237096
Number of extensions: 2544987
Number of successful extensions: 5737
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5737
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)