Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1b14
(768 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 3.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 3.1
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 5.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.2
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.4
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +1
Query: 490 SKSKDEEETNSSSPKIQPKTITASLN------VRDFDWNVANEYDPMWPNDYEKVAK 642
SK + ++ T + K +PK I++ N +++ N N Y+ + N+Y+K+ K
Sbjct: 63 SKERSQDRTERETSK-EPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYK 118
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.4
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +1
Query: 490 SKSKDEEETNSSSPKIQPKTITASLN------VRDFDWNVANEYDPMWPNDYEKVAK 642
SK + ++ T + K +PK I++ N +++ N N Y+ + N+Y+K+ K
Sbjct: 63 SKERSQDRTERETSK-EPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYK 118
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 169 PAKWSHHSRHLCGYLALVLV-WNT 237
P KW H + C LA+ + WN+
Sbjct: 490 PGKWPHEDKRGCYQLAINHIRWNS 513
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 169 PAKWSHHSRHLCGYLALVLV-WNT 237
P KW H + C LA+ + WN+
Sbjct: 580 PGKWPHEDKRGCYQLAINHIRWNS 603
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 204 WLLGFGACMEHIIDFNSLMLMITHFVKRSNPVI 302
WL+ +G + +SL+ + H +R NP I
Sbjct: 285 WLVNWGEQWGFLPSKDSLVFVDNHDTQRDNPQI 317
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 697 SYPTCLLCHLTEASLLAILLQLFHN 623
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 697 SYPTCLLCHLTEASLLAILLQLFHN 623
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 697 SYPTCLLCHLTEASLLAILLQLFHN 623
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 697 SYPTCLLCHLTEASLLAILLQLFHN 623
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 697 SYPTCLLCHLTEASLLAILLQLFHN 623
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 697 SYPTCLLCHLTEASLLAILLQLFHN 623
SY C++ + + +L +L+ +FH+
Sbjct: 259 SYFNCIMFMVASSVVLTVLVLIFHH 283
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,822
Number of Sequences: 438
Number of extensions: 3666
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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