BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1b09
(823 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071427-1|AAL49049.1| 323|Drosophila melanogaster RE51744p pro... 30 4.4
AE014296-1218|AAF50590.1| 323|Drosophila melanogaster CG14830-P... 30 4.4
>AY071427-1|AAL49049.1| 323|Drosophila melanogaster RE51744p
protein.
Length = 323
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 449 MALNNLPVLLKHLKFLQTVQWVTSYYKWVLQ*IWLSWGF 565
M L NL ++L L F+ VQ+ Y W+L ++L +GF
Sbjct: 209 MLLLNLGLILVTLGFVIVVQFYEPLYVWILGIVFLVFGF 247
>AE014296-1218|AAF50590.1| 323|Drosophila melanogaster CG14830-PA
protein.
Length = 323
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 449 MALNNLPVLLKHLKFLQTVQWVTSYYKWVLQ*IWLSWGF 565
M L NL ++L L F+ VQ+ Y W+L ++L +GF
Sbjct: 209 MLLLNLGLILVTLGFVIVVQFYEPLYVWILGIVFLVFGF 247
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,452,777
Number of Sequences: 53049
Number of extensions: 684915
Number of successful extensions: 1567
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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