Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1b04
(749 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03495-1|AAA21325.1| 450|Homo sapiens transcription factor LSF-... 33 1.4
U03494-1|AAA21324.1| 502|Homo sapiens transcription factor LSF ... 33 1.4
BC003634-1|AAH03634.1| 502|Homo sapiens transcription factor CP... 33 1.4
X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein. 32 2.5
BC030560-1|AAH30560.1| 551|Homo sapiens HCFC1 protein protein. 32 2.5
BC019887-1|AAH19887.1| 551|Homo sapiens Unknown (protein for IM... 32 2.5
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 31 3.3
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 3.3
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 31 3.3
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 31 3.3
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 31 3.3
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 3.3
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 31 3.3
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 3.3
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 31 4.4
EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3 pr... 31 5.8
AJ133767-1|CAB46728.1| 617|Homo sapiens ZASP protein protein. 31 5.8
AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein. 31 5.8
BC010738-1|AAH10738.2| 490|Homo sapiens TMEM112 protein protein. 30 7.7
AK025955-1|BAB15295.1| 458|Homo sapiens protein ( Homo sapiens ... 30 7.7
AK022743-1|BAB14218.1| 567|Homo sapiens protein ( Homo sapiens ... 30 7.7
AE006465-5|AAK61259.1| 567|Homo sapiens possible integral membr... 30 7.7
AB075873-1|BAD38655.1| 563|Homo sapiens putative protein produc... 30 7.7
>U03495-1|AAA21325.1| 450|Homo sapiens transcription factor LSF-ID
protein.
Length = 450
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 16 YLNK*RSISLRYLPNRKVGSLNSLFWAVIK*VFRV 120
YLN+ +S +R L NRK+G L + ++K +FRV
Sbjct: 88 YLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRV 122
>U03494-1|AAA21324.1| 502|Homo sapiens transcription factor LSF
protein.
Length = 502
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 16 YLNK*RSISLRYLPNRKVGSLNSLFWAVIK*VFRV 120
YLN+ +S +R L NRK+G L + ++K +FRV
Sbjct: 88 YLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRV 122
>BC003634-1|AAH03634.1| 502|Homo sapiens transcription factor CP2
protein.
Length = 502
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 16 YLNK*RSISLRYLPNRKVGSLNSLFWAVIK*VFRV 120
YLN+ +S +R L NRK+G L + ++K +FRV
Sbjct: 88 YLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRV 122
>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
Length = 1938
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 490
P+ + P +PAP A V P G P P TTI+ +PT P
Sbjct: 319 PSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVP 369
>BC030560-1|AAH30560.1| 551|Homo sapiens HCFC1 protein protein.
Length = 551
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 490
P+ + P +PAP A V P G P P TTI+ +PT P
Sbjct: 418 PSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVP 468
>BC019887-1|AAH19887.1| 551|Homo sapiens Unknown (protein for
IMAGE:5142023) protein.
Length = 551
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 490
P+ + P +PAP A V P G P P TTI+ +PT P
Sbjct: 418 PSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVP 468
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 460
PAA+ G +P PT P G P + G YP +P D
Sbjct: 167 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 209
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 460
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 316
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 460
PAA+ G +P PT P G P + G YP +P D
Sbjct: 216 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 258
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 460
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVD 316
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 460
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 316
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 460
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 316
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 460
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVD 316
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 338 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 460
PAA+ G +P PT P G P + G YP +P D
Sbjct: 250 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 292
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 31.1 bits (67), Expect = 4.4
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 350 SYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTPQNASILS 511
S PG TP+P P T S P TP+ T+I VPTT N++ +S
Sbjct: 130 SGPGTTPSPV-PTTSTTSAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPIS 182
>EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3
protein.
Length = 727
Score = 30.7 bits (66), Expect = 5.8
Identities = 28/111 (25%), Positives = 35/111 (31%)
Frame = +2
Query: 314 PGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTPQ 493
P + P A P TP +P TP A Y P PT + + P+
Sbjct: 412 PASTYSPSPGANYSP--TPYTPSPAPAYTPSPAPAYTPSP--VPTYTPSPAPAYTPSPAP 467
Query: 494 NASILSEKAVVAGYEGHDGSPLWVIRSQFQGDLIPGKLCVKHFSAYVPWGG 646
N + A G P WV F PGK +P GG
Sbjct: 468 NYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGG 518
>AJ133767-1|CAB46728.1| 617|Homo sapiens ZASP protein protein.
Length = 617
Score = 30.7 bits (66), Expect = 5.8
Identities = 28/111 (25%), Positives = 35/111 (31%)
Frame = +2
Query: 314 PGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTPQ 493
P + P A P TP +P TP A Y P PT + + P+
Sbjct: 302 PASTYSPSPGANYSP--TPYTPSPAPAYTPSPAPAYTPSP--VPTYTPSPAPAYTPSPAP 357
Query: 494 NASILSEKAVVAGYEGHDGSPLWVIRSQFQGDLIPGKLCVKHFSAYVPWGG 646
N + A G P WV F PGK +P GG
Sbjct: 358 NYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGG 408
>AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein.
Length = 734
Score = 30.7 bits (66), Expect = 5.8
Identities = 28/111 (25%), Positives = 35/111 (31%)
Frame = +2
Query: 314 PGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTPQ 493
P + P A P TP +P TP A Y P PT + + P+
Sbjct: 419 PASTYSPSPGANYSP--TPYTPSPAPAYTPSPAPAYTPSP--VPTYTPSPAPAYTPSPAP 474
Query: 494 NASILSEKAVVAGYEGHDGSPLWVIRSQFQGDLIPGKLCVKHFSAYVPWGG 646
N + A G P WV F PGK +P GG
Sbjct: 475 NYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGG 525
>BC010738-1|AAH10738.2| 490|Homo sapiens TMEM112 protein protein.
Length = 490
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 144 YRNRKCLDIHTETQIIPHPKDQFTHRS 224
+R+ C+D H ETQ +P+P + H S
Sbjct: 155 WRDLTCMDFHYETQPMPNPVAYYLHHS 181
>AK025955-1|BAB15295.1| 458|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22302 fis, clone HRC04795. ).
Length = 458
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 144 YRNRKCLDIHTETQIIPHPKDQFTHRS 224
+R+ C+D H ETQ +P+P + H S
Sbjct: 123 WRDLTCMDFHYETQPMPNPVAYYLHHS 149
>AK022743-1|BAB14218.1| 567|Homo sapiens protein ( Homo sapiens
cDNA FLJ12681 fis, clone NT2RM4002446. ).
Length = 567
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 144 YRNRKCLDIHTETQIIPHPKDQFTHRS 224
+R+ C+D H ETQ +P+P + H S
Sbjct: 232 WRDLTCMDFHYETQPMPNPVAYYLHHS 258
>AE006465-5|AAK61259.1| 567|Homo sapiens possible integral membrane
protein.
Length = 567
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 144 YRNRKCLDIHTETQIIPHPKDQFTHRS 224
+R+ C+D H ETQ +P+P + H S
Sbjct: 232 WRDLTCMDFHYETQPMPNPVAYYLHHS 258
>AB075873-1|BAD38655.1| 563|Homo sapiens putative protein product
of HMFN1876 protein.
Length = 563
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 144 YRNRKCLDIHTETQIIPHPKDQFTHRS 224
+R+ C+D H ETQ +P+P + H S
Sbjct: 228 WRDLTCMDFHYETQPMPNPVAYYLHHS 254
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,518,569
Number of Sequences: 237096
Number of extensions: 2927379
Number of successful extensions: 8256
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8250
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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