Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1b02
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 150 8e-37
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 150 8e-37
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 35 0.034
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 35 0.034
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 33 0.18
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 32 0.24
AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical ... 31 0.73
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 30 0.96
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 30 0.96
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 30 0.96
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 30 0.96
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 30 0.96
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 30 0.96
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 30 0.96
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 30 0.96
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 30 1.3
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 30 1.3
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 30 1.3
AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical... 30 1.3
Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical p... 29 1.7
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 29 1.7
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 29 1.7
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 1.7
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 29 2.2
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 29 2.2
Z48638-9|CAA88569.1| 202|Caenorhabditis elegans Hypothetical pr... 29 2.9
U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 28 3.9
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 28 3.9
U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 28 3.9
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 28 3.9
AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 28 3.9
Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical pr... 28 5.1
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 28 5.1
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical pr... 27 6.8
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 27 6.8
U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of p... 27 6.8
U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of p... 27 6.8
AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc... 27 6.8
AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical ... 27 6.8
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 27 6.8
U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 27 9.0
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 27 9.0
AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical... 27 9.0
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 150 bits (363), Expect = 8e-37
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +1
Query: 154 MGRKKKKASKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMXVHKE 333
MGRKKKK KPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKL++GPGLSIHCM VHKE
Sbjct: 1 MGRKKKKVDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKE 60
Query: 334 AIDKVPNSLPNRSXI 378
IDK+P ++ R I
Sbjct: 61 TIDKIPAAVHGRDNI 75
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 150 bits (363), Expect = 8e-37
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +1
Query: 154 MGRKKKKASKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMXVHKE 333
MGRKKKK KPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKL++GPGLSIHCM VHKE
Sbjct: 1 MGRKKKKVDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKE 60
Query: 334 AIDKVPNSLPNRSXI 378
IDK+P ++ R I
Sbjct: 61 TIDKIPAAVHGRDNI 75
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 35.1 bits (77), Expect = 0.034
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKAKHFKCHIC 273
C C + F D++ L +H++ +H CH+C
Sbjct: 14 CGICGKYFSDDESLREHRRQRHMTCHMC 41
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 160 RKKKKASKPWCWYCNREFDDEKILIQHQKAKH--FKCHIC 273
R+++ + C CNR + + L +H K KH +K IC
Sbjct: 31 RRQRHMTCHMCLLCNRRIPENETLREHMKNKHNIWKLFIC 70
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKAKHF---KCHICHKKLYTGPGLSIHCMXVHKEAIDKVPNSL 360
C +C ++F E L +H++ H C +C++++ + H H I KV N L
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHN--IKKVYNCL 238
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 35.1 bits (77), Expect = 0.034
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKAKHFKCHIC 273
C C + F D++ L +H++ +H CH+C
Sbjct: 14 CGICGKYFSDDESLREHRRQRHMTCHMC 41
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 160 RKKKKASKPWCWYCNREFDDEKILIQHQKAKH--FKCHIC 273
R+++ + C CNR + + L +H K KH +K IC
Sbjct: 31 RRQRHMTCHMCLLCNRRIPENETLREHMKNKHNIWKLFIC 70
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKAKHF---KCHICHKKLYTGPGLSIHCMXVHKEAIDKVPNSL 360
C +C ++F E L +H++ H C +C++++ + H H I KV N L
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHN--IKKVYNCL 238
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 32.7 bits (71), Expect = 0.18
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 14/74 (18%)
Frame = +1
Query: 157 GRKKKKASKPWCWYCNREFDDEKILIQHQ----KAKH----------FKCHICHKKLYTG 294
G+K + K C YCN+ F L +H +AKH +KC IC K+
Sbjct: 281 GKKPVREKKNVCPYCNKAFVRPAELARHSFVHLRAKHLQSSSTEIPKWKCAICFKEYAHQ 340
Query: 295 PGLSIHCMXVHKEA 336
GLS H VH A
Sbjct: 341 AGLSEHKRTVHGNA 354
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +1
Query: 187 WCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMXVHKEAIDKVPNSL 360
+C C + +D K K F+C C + L IH + H +A D V ++
Sbjct: 111 YCMECRSKIEDTNSHDCRLKPKLFECTECRESFNFEKNLKIHKILDHLKATDFVRGTI 168
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 184 PWCWYCNREFDDEKILIQHQKAKHFKCHIC 273
P C +C ++F DE+ +H + HF C C
Sbjct: 255 PQCLFCEQKFLDEENRYRHLRKDHFFCQFC 284
>AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical
protein F52H2.7 protein.
Length = 875
Score = 30.7 bits (66), Expect = 0.73
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 157 GRKKKKASKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYT 291
GR+K+ S P + CN+ H +K C C KK +T
Sbjct: 404 GREKRSDSAPRAFRCNQFHSPSHETKYHSPSKVLPCSYCKKKTFT 448
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 172 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 273
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 229 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 267
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 172 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 273
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 233 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 271
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 172 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 273
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 229 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 267
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 172 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 273
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 233 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 271
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 172 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 273
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 233 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 271
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 30.3 bits (65), Expect = 0.96
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKAKHF---KCHICHKKLYTGPGLSIHCMXVH 327
C C++ F L +H+ HF KC +C K + + L H H
Sbjct: 53 CSICSKVFCHSSSLSRHRMQAHFKSYKCTVCRKDISSSESLRTHMFKQH 101
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 172 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 273
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 229 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 267
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 172 KASKPW-CWYCNREFDDEKILI----QHQKAKHFKCHIC 273
+ KP+ C C + F DE+ L+ +H+++KH K HIC
Sbjct: 233 QTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIHIC 271
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLYTGPGLSIH 312
C CN++F + L +H+K H F+CH C + + ++IH
Sbjct: 317 CPDCNQKFLTPRKLRKHRKMAHVFSRTFQCHFCEEFFISDTAVTIH 362
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMXVH--KEAIDKVP 351
C C R + L H + + FKC IC + T L H M VH K + +P
Sbjct: 307 CILCRRVLSCKSALQMHYRTHTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLP 365
Query: 352 NSLP 363
SLP
Sbjct: 366 ISLP 369
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +1
Query: 172 KASKPWCWYCNREFDDEKILIQHQK----AKHFKCHICHKKLYTGPGLSIHCMXVHKE 333
K+++ C YCN F +K ++ H++ K + C C K L+ H KE
Sbjct: 296 KSARYSCSYCNLRFHFKKDMLVHERIHTGEKPYSCGYCMKSFAQSQALTAHIRTHTKE 353
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMXVH--KEAIDKVP 351
C C R + L H + + FKC IC + T L H M VH K + +P
Sbjct: 278 CILCRRVLSCKSALQMHYRTHTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLP 336
Query: 352 NSLP 363
SLP
Sbjct: 337 ISLP 340
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMXVH--KEAIDKVP 351
C C R + L H + + FKC IC + T L H M VH K + +P
Sbjct: 307 CILCRRVLSCKSALQMHYRTHTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLP 365
Query: 352 NSLP 363
SLP
Sbjct: 366 ISLP 369
>AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical
protein Y22D7AL.16 protein.
Length = 233
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +1
Query: 172 KASKPWCWYCNREFDDEKILIQHQKAKH---FKCHICHKKLYTGPGLSIHCMXVH 327
KA + C C + FD + L +H+ H F C+ C KK + L+ H H
Sbjct: 51 KAPQFNCRQCRKAFDSIRELAEHEIKNHEDQFNCYHCDKKSESIERLAAHTAHRH 105
>Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical
protein R10E4.11 protein.
Length = 302
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKAKH 255
C YC R+F K +I+H+K KH
Sbjct: 227 CRYCVRQFRTVKEVIEHEKEKH 248
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +1
Query: 199 CNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMXVHKEAI 339
C + F E+ L H K + CH C++K + ++H H+ +I
Sbjct: 406 CGKTFRTEQALHDHFNVHDGIKPYSCHTCNQKFHARDRFAVHLSKYHQTSI 456
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 256 FKCHICHKKLYTGPGLSIHCMXVHKEAID 342
+KC C K+ T GLS H M H++ D
Sbjct: 271 YKCTYCSKRYKTSSGLSNHMMSSHQKISD 299
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 238 HQKAKHFKCHICHKKLYTGPGLSIHCMXVHKEAIDKVPNSL 360
H ++ F+C ICHK L H VH++ K ++L
Sbjct: 262 HSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAPKSRSAL 302
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 238 HQKAKHFKCHICHKKLYTGPGLSIHCMXVHKEAIDKVPNSL 360
H ++ F+C ICHK L H VH++ K ++L
Sbjct: 380 HSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAPKSRSAL 420
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 250 KHFKCHICHKKLYTGPGLSIHCM-XVHKEAIDKVPNSL 360
K ++C +C T LSIH H A+ ++PNS+
Sbjct: 155 KPYRCDLCRYSTTTKGNLSIHMQSDKHLHAVQELPNSI 192
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -2
Query: 475 ITVRPXAST*FVXLMFFHIFRGYTFHSINFYF-LYXTYSAVNLV-LCLWLLYVXACSVWT 302
+ V A F+ L+F +I Y+F + N+YF + +S V+L+ L W V + W
Sbjct: 62 LAVLAFADIIFLFLLFPNILANYSFFTFNWYFRWFYLHSKVHLISLANWCSSV---AHWC 118
Query: 301 VQVLC 287
V +C
Sbjct: 119 VIAVC 123
>Z48638-9|CAA88569.1| 202|Caenorhabditis elegans Hypothetical
protein ZK892.7 protein.
Length = 202
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 172 KASKPWCWYCNREFDDEKILIQHQKAKHFKCHIC 273
K+ P C YC F + +H+ H K H C
Sbjct: 8 KSEAPICGYCQLTFSQTGSMTRHRDRLHTKNHTC 41
>U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical
protein F53B3.1 protein.
Length = 543
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKAKH-----FKCHICHK 279
C +CN +F + L +H+K H F+CH C +
Sbjct: 415 CSFCNMKFLTPRKLRKHKKMSHVFTKTFQCHFCEE 449
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 151 KMGRKKKKASKPWCWYCNREFDDEKILIQHQKAKH 255
++ R KK P C +C++ F +E L +H KH
Sbjct: 316 QLKRPYKKKVSPQCPFCDKRFRNEFSLKKHFAKKH 350
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 238 HQKAKHFKCHICHKKLYTGPGLSIHCMXVHKEAIDKVPNSLPNRSXIGNR 387
HQKA+H H +K Y+ G + +HK+A + N ++S GN+
Sbjct: 30 HQKAEH-SGHEAKEKGYSQDGKAADHDALHKDAAEHKQNKEAHQSGSGNK 78
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/59 (23%), Positives = 23/59 (38%)
Frame = +1
Query: 184 PWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMXVHKEAIDKVPNSL 360
P C C + E + ++ H C +C KL+ P + E D+ N+L
Sbjct: 4 PTCEICEESYRSESRIPKNLNCGHVICPVCASKLFENPEVKCPTCRQPIEVKDRDVNNL 62
>U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated
protein 97 protein.
Length = 348
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 184 PWCWYCNREFDDEKI--LIQHQKAKHFKCHICHK 279
P C C+R ++ I L +H +HF C +C K
Sbjct: 203 PICGACHRPIEERVIAALGKHWHVEHFVCSVCEK 236
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = +1
Query: 190 CWYCNREFDDEKIL----IQHQKAKHFKCHICHKKLYTGPGLSIHCMXVH 327
C C+R F L H++ K F CH+C K L H +H
Sbjct: 166 CSICSRAFHQSYNLAFHMFTHEEHKPFTCHVCSKGFCRNFDLKKHLRKMH 215
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 232 IQHQKAKHFKCHICHKKLYTGPGLSIHCMXVHKE 333
+ H+ K F C IC + + L+ H M H+E
Sbjct: 156 LTHEDTKKFSCSICSRAFHQSYNLAFH-MFTHEE 188
>AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein.
Length = 348
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 184 PWCWYCNREFDDEKI--LIQHQKAKHFKCHICHK 279
P C C+R ++ I L +H +HF C +C K
Sbjct: 203 PICGACHRPIEERVIAALGKHWHVEHFVCSVCEK 236
>Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical
protein T22C8.5 protein.
Length = 166
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = +1
Query: 163 KKKKASKPW-C-WY-CNREFDDEKILIQHQ----KAKHFKCHICHKKLYTGPGLSIHCMX 321
+K +P+ C W+ C + FD LI+H+ K F C C ++ L H
Sbjct: 99 RKHTGDRPFVCDWFDCGKRFDRSDQLIRHKRTHTKEYRFACKFCIRQFSRSDHLQQHLTS 158
Query: 322 VH 327
VH
Sbjct: 159 VH 160
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 12/58 (20%)
Frame = +1
Query: 175 ASKPWCWYCNREFDDEKILIQHQK-----------AKH-FKCHICHKKLYTGPGLSIH 312
A P C C R+F ++K L H K H F+C C K+ P L H
Sbjct: 24 AKVPQCQVCKRKFANQKTLRTHMKHITCRPGRSNVVNHKFRCENCEKQFTNKPNLKRH 81
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +1
Query: 181 KPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMXVHKE 333
KP+ C C + F L QHQ+ K F+C C K LS H + +H +
Sbjct: 124 KPFHCQKCTKLFSTIAALEQHQQVHVSDKQFECKQCGKTFKRSSTLSTH-LLIHSD 178
>Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical
protein F34D10.5 protein.
Length = 280
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMXVH 327
C +C + F+D L +H + + +KC C K L H VH
Sbjct: 163 CTFCGKGFNDTFDLKRHTRTHTGVRPYKCEQCEKSFTQRCSLESHLRKVH 212
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +1
Query: 181 KPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMXVHKE 333
KP+ C C + F L QHQ+ K F+C C K LS H + +H +
Sbjct: 124 KPFHCQKCTKLFSTIAALEQHQQVHVSDKQFECKQCGKTFKRSSTLSTH-LLIHSD 178
>U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform b protein.
Length = 623
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 256 FKCHICHKKLYTGPGLSIH 312
+KCH+C + Y G GL+ H
Sbjct: 21 YKCHLCGQCFYRGCGLASH 39
>U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform a protein.
Length = 684
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 256 FKCHICHKKLYTGPGLSIH 312
+KCH+C + Y G GL+ H
Sbjct: 21 YKCHLCGQCFYRGCGLASH 39
>AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc
finger transcriptionfactor protein.
Length = 280
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMXVH 327
C +C + F+D L +H + + +KC C K L H VH
Sbjct: 163 CTFCGKGFNDTFDLKRHTRTHTGVRPYKCEQCEKSFTQRCSLESHLRKVH 212
>AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical
protein Y14H12B.1a protein.
Length = 250
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +1
Query: 244 KAKHFKCHI--C-HKKLYTGPGLSIHCMXVHKEAIDKVPNS 357
K K FKC C H+ YT GL H HK ++P++
Sbjct: 22 KTKQFKCTWDGCDHRVFYTSRGLQWHTSVAHKLDNSEIPST 62
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIH 312
C C + F IL H+++ K + CH C K L +H
Sbjct: 106 CTVCGKGFSYFSILESHKRSHTGEKPYNCHFCQKTFAQKATLQVH 150
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKA---KHFKCHICHKKLYTGPGLSIHCMXVHKE 333
C C++ L H+K K F+C C K L +H VH++
Sbjct: 191 CPKCDKLLSSPSALYTHKKTHGDKTFRCDFCPKTFALKNYLKLHVKQVHEQ 241
>U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical
protein C27A2.7 protein.
Length = 216
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 241 QKAKHFKCHICHKKLYTGPGLSIHCMXVHKEAIDKVP 351
Q + +KC CH + GL H VH + + K P
Sbjct: 125 QDQRVWKCVYCHTQFGRRGGLRRHVQMVHMQMMHKCP 161
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 163 KKKKASKPWCWYCNREFDDEKILIQHQKAKHFKCHIC 273
K AS+ C C +D+E + + K H CH C
Sbjct: 167 KSSLASRVECTICYLSYDNEARVPRVMKCGHTICHTC 203
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 163 KKKKASKPWCWYCNREFDDEKILIQHQKAKHFKCHIC 273
K AS+ C C +D+E + + K H CH C
Sbjct: 167 KSSLASRVECTICYLSYDNEARVPRVMKCGHTICHTC 203
>AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical
protein C46E10.9 protein.
Length = 393
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQK----AKHFKCHICHKKLYTGPGLSIHCMXVHKE 333
C C ++F ++ L +H+K K KC+IC + L+ L H KE
Sbjct: 212 CEICEKQFANKPNLNRHRKIHSGTKSKKCNICQQTLHRENRLQEHLYTHLKE 263
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 190 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMXVH 327
C C+R F + L +H++ K F+CH C ++ L H M +H
Sbjct: 251 CDRCSRTFKYQSKLDEHRRTHLGVKPFQCHYCTRQFSQRGALKTH-MRLH 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,810,587
Number of Sequences: 27780
Number of extensions: 198645
Number of successful extensions: 788
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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